EHI_042870 | cell surface protease gp63, putative

_IDPredictionOTHERSPmTPCS_Position
EHI_042870SP0.0638980.9352540.000848CS pos: 14-15. HQC-IF. Pr: 0.2814
No Results

  • Fasta :-

    >EHI_042870 MIFLLVITALGHQCIFNEINKNTKKSVLPTLRSSIKSSSSWHPLRFSYDLIGLTDQSYAS QQWCKYTGETIILSSSNIYKCSEDDVLTKEKIEYIDRLFQSLNQSISEVFNVHTINYNKV IPGKKYCGEAVFPETYTIPEESDFHIMVTSHPHTSSGVFAYAAACYFGMDSQVNKRRSVM GYVNIVTSALEPTEERFRDQVGIIFHETMHALGFDGSLGVDKKVGDLNLKVVEDEIVVAR ARKHFGCDNMTYVPLEDGGGRGTANAHWERRIFISEIMNGITSNNPRVSEITLAYFEALG VYKPNYEMADALSWGRGLGCSFLEDCSKWPKQNGYYCRTGVRRCTNDRSAIGICDGNSFK ETLNKSYQHYGDPHIGGSDEIADNCIFVSPIETSYCYQKMSALSFDYYFTLEMLNHGQNF GDTSMCFESSLIKFIPFGINNYHCYSVACMNNSFYKISIDGRYYDCDKSIKVRGYGGKLI CADPKDICGNRVIETWPEIDSVENKTISVGDVLVINGRNLDVVQKVYIDYTSCKILHKSK EQLQIEVDYHDPFISFISFEASLMIEANESVNSCYDHLIKIKVPTYYIFLNFGDWVMTNY IFIAVIPVWIIFFILLFGYYTLKVVVIRQAEEVREAKREINLRLGNLKDKPQKKKQSFCV MF
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_042870.fa Sequence name : EHI_042870 Sequence length : 662 VALUES OF COMPUTED PARAMETERS Coef20 : 4.082 CoefTot : -0.594 ChDiff : -9 ZoneTo : 48 KR : 6 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.794 3.147 0.539 1.126 MesoH : 0.476 1.067 -0.128 0.506 MuHd_075 : 27.592 27.991 11.270 7.155 MuHd_095 : 47.403 29.777 13.794 10.028 MuHd_100 : 47.230 22.673 12.826 8.714 MuHd_105 : 37.609 20.052 9.409 6.967 Hmax_075 : 17.967 24.383 6.138 6.895 Hmax_095 : 16.012 15.400 3.000 5.180 Hmax_100 : 15.500 13.800 2.805 4.820 Hmax_105 : 4.725 13.800 -1.264 5.150 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6052 0.3948 DFMC : 0.5471 0.4529
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 662 EHI_042870 MIFLLVITALGHQCIFNEINKNTKKSVLPTLRSSIKSSSSWHPLRFSYDLIGLTDQSYASQQWCKYTGETIILSSSNIYK 80 CSEDDVLTKEKIEYIDRLFQSLNQSISEVFNVHTINYNKVIPGKKYCGEAVFPETYTIPEESDFHIMVTSHPHTSSGVFA 160 YAAACYFGMDSQVNKRRSVMGYVNIVTSALEPTEERFRDQVGIIFHETMHALGFDGSLGVDKKVGDLNLKVVEDEIVVAR 240 ARKHFGCDNMTYVPLEDGGGRGTANAHWERRIFISEIMNGITSNNPRVSEITLAYFEALGVYKPNYEMADALSWGRGLGC 320 SFLEDCSKWPKQNGYYCRTGVRRCTNDRSAIGICDGNSFKETLNKSYQHYGDPHIGGSDEIADNCIFVSPIETSYCYQKM 400 SALSFDYYFTLEMLNHGQNFGDTSMCFESSLIKFIPFGINNYHCYSVACMNNSFYKISIDGRYYDCDKSIKVRGYGGKLI 480 CADPKDICGNRVIETWPEIDSVENKTISVGDVLVINGRNLDVVQKVYIDYTSCKILHKSKEQLQIEVDYHDPFISFISFE 560 ASLMIEANESVNSCYDHLIKIKVPTYYIFLNFGDWVMTNYIFIAVIPVWIIFFILLFGYYTLKVVVIRQAEEVREAKREI 640 NLRLGNLKDKPQKKKQSFCVMF 720 ................................................................................ 80 ................................................................................ 160 ................P............................................................... 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ...................... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ EHI_042870 21 IFNEINK|NT 0.060 . EHI_042870 24 EINKNTK|KS 0.054 . EHI_042870 25 INKNTKK|SV 0.260 . EHI_042870 32 SVLPTLR|SS 0.108 . EHI_042870 36 TLRSSIK|SS 0.093 . EHI_042870 45 SSWHPLR|FS 0.118 . EHI_042870 65 ASQQWCK|YT 0.087 . EHI_042870 80 SSSNIYK|CS 0.087 . EHI_042870 89 EDDVLTK|EK 0.061 . EHI_042870 91 DVLTKEK|IE 0.055 . EHI_042870 97 KIEYIDR|LF 0.068 . EHI_042870 119 HTINYNK|VI 0.057 . EHI_042870 124 NKVIPGK|KY 0.065 . EHI_042870 125 KVIPGKK|YC 0.124 . EHI_042870 175 MDSQVNK|RR 0.071 . EHI_042870 176 DSQVNKR|RS 0.152 . EHI_042870 177 SQVNKRR|SV 0.521 *ProP* EHI_042870 196 LEPTEER|FR 0.098 . EHI_042870 198 PTEERFR|DQ 0.100 . EHI_042870 222 GSLGVDK|KV 0.081 . EHI_042870 223 SLGVDKK|VG 0.095 . EHI_042870 230 VGDLNLK|VV 0.068 . EHI_042870 240 DEIVVAR|AR 0.088 . EHI_042870 242 IVVARAR|KH 0.087 . EHI_042870 243 VVARARK|HF 0.258 . EHI_042870 261 LEDGGGR|GT 0.082 . EHI_042870 270 ANAHWER|RI 0.124 . EHI_042870 271 NAHWERR|IF 0.174 . EHI_042870 287 ITSNNPR|VS 0.121 . EHI_042870 303 EALGVYK|PN 0.062 . EHI_042870 316 DALSWGR|GL 0.089 . EHI_042870 328 FLEDCSK|WP 0.059 . EHI_042870 331 DCSKWPK|QN 0.081 . EHI_042870 338 QNGYYCR|TG 0.075 . EHI_042870 342 YCRTGVR|RC 0.070 . EHI_042870 343 CRTGVRR|CT 0.140 . EHI_042870 348 RRCTNDR|SA 0.184 . EHI_042870 360 CDGNSFK|ET 0.060 . EHI_042870 365 FKETLNK|SY 0.085 . EHI_042870 399 TSYCYQK|MS 0.067 . EHI_042870 433 FESSLIK|FI 0.071 . EHI_042870 456 MNNSFYK|IS 0.082 . EHI_042870 462 KISIDGR|YY 0.106 . EHI_042870 468 RYYDCDK|SI 0.074 . EHI_042870 471 DCDKSIK|VR 0.063 . EHI_042870 473 DKSIKVR|GY 0.195 . EHI_042870 478 VRGYGGK|LI 0.074 . EHI_042870 485 LICADPK|DI 0.082 . EHI_042870 491 KDICGNR|VI 0.088 . EHI_042870 505 IDSVENK|TI 0.089 . EHI_042870 518 VLVINGR|NL 0.091 . EHI_042870 525 NLDVVQK|VY 0.062 . EHI_042870 534 IDYTSCK|IL 0.080 . EHI_042870 538 SCKILHK|SK 0.089 . EHI_042870 540 KILHKSK|EQ 0.069 . EHI_042870 580 CYDHLIK|IK 0.054 . EHI_042870 582 DHLIKIK|VP 0.056 . EHI_042870 623 FGYYTLK|VV 0.062 . EHI_042870 628 LKVVVIR|QA 0.158 . EHI_042870 634 RQAEEVR|EA 0.099 . EHI_042870 637 EEVREAK|RE 0.089 . EHI_042870 638 EVREAKR|EI 0.142 . EHI_042870 643 KREINLR|LG 0.074 . EHI_042870 648 LRLGNLK|DK 0.073 . EHI_042870 650 LGNLKDK|PQ 0.068 . EHI_042870 653 LKDKPQK|KK 0.060 . EHI_042870 654 KDKPQKK|KQ 0.109 . EHI_042870 655 DKPQKKK|QS 0.121 . ____________________________^_________________

  • Fasta :-

    >EHI_042870 ATGATTTTTTTGTTAGTCATTACAGCACTTGGACATCAATGTATTTTTAATGAAATAAAT AAAAACACTAAGAAAAGTGTATTACCAACACTAAGGTCTTCAATAAAGAGTAGTTCTAGT TGGCATCCTCTTCGATTTAGTTATGACTTAATAGGGTTAACTGATCAATCATATGCTAGT CAGCAATGGTGCAAATACACGGGTGAGACAATTATTCTGTCTTCATCCAATATTTATAAG TGTTCCGAAGATGATGTTTTAACAAAAGAGAAAATTGAATATATTGATAGACTATTTCAA AGCCTCAACCAGAGCATTTCTGAAGTTTTTAATGTTCATACAATTAATTATAATAAAGTT ATTCCTGGTAAAAAATATTGTGGAGAAGCAGTATTTCCTGAAACATATACTATTCCAGAA GAAAGTGACTTCCATATTATGGTAACTTCACATCCACATACTTCTTCTGGTGTATTTGCT TATGCCGCTGCATGTTATTTTGGTATGGATAGTCAAGTAAACAAACGGCGTTCAGTAATG GGATATGTAAATATTGTTACGTCAGCATTAGAACCAACTGAAGAACGTTTTAGAGATCAG GTAGGAATTATTTTTCATGAAACAATGCATGCACTTGGATTTGATGGTAGTCTTGGTGTA GATAAAAAAGTTGGAGACTTAAACTTAAAAGTTGTCGAAGATGAAATTGTTGTTGCTCGA GCAAGAAAGCATTTTGGGTGTGACAATATGACGTATGTTCCACTTGAAGATGGAGGAGGA CGAGGTACAGCAAATGCACATTGGGAAAGAAGAATTTTTATATCAGAAATCATGAATGGT ATTACTTCAAATAATCCAAGAGTTAGTGAAATAACATTAGCTTATTTTGAGGCACTTGGG GTTTATAAACCAAATTATGAAATGGCGGATGCTTTATCTTGGGGAAGGGGTCTTGGATGT TCCTTCTTAGAGGATTGTTCTAAATGGCCAAAACAAAATGGATATTATTGTAGGACTGGT GTAAGGAGGTGTACTAATGACCGTTCTGCTATTGGTATATGTGATGGAAATTCATTTAAA GAAACGTTAAACAAATCATACCAACATTATGGAGACCCACATATTGGTGGAAGTGATGAG ATTGCTGATAATTGTATATTTGTATCACCTATTGAAACTAGTTATTGTTATCAAAAAATG AGTGCATTATCATTTGACTATTATTTTACTTTGGAAATGCTTAATCATGGACAAAATTTT GGAGATACTTCAATGTGTTTTGAAAGTTCATTAATTAAATTTATACCTTTTGGTATTAAT AATTATCATTGTTATTCAGTTGCTTGTATGAATAATTCCTTTTATAAAATTTCAATTGAT GGTAGATATTATGACTGTGATAAATCAATTAAAGTTCGTGGATATGGAGGTAAATTAATT TGTGCAGATCCAAAAGATATTTGTGGTAATAGAGTTATAGAAACATGGCCTGAAATTGAT TCTGTAGAAAATAAAACAATTTCAGTTGGAGATGTTTTAGTTATTAATGGAAGGAATCTT GATGTTGTTCAAAAAGTATATATTGATTATACTTCATGTAAAATTCTTCATAAATCAAAA GAACAACTTCAAATAGAAGTTGATTATCATGATCCATTTATATCATTTATTTCTTTTGAA GCTTCATTAATGATAGAAGCAAATGAATCAGTAAATTCTTGTTATGACCATTTGATAAAA ATTAAAGTACCAACTTATTATATCTTCTTAAATTTTGGAGATTGGGTAATGACCAATTAT ATTTTTATTGCTGTCATTCCTGTGTGGATTATTTTCTTTATCTTATTGTTTGGATATTAT ACATTAAAGGTTGTAGTGATAAGACAAGCAGAAGAAGTTCGTGAAGCAAAACGGGAAATT AATCTTCGTTTAGGTAATTTGAAGGACAAACCACAAAAGAAAAAGCAAAGCTTTTGTGTT ATGTTTTAA
  • Download Fasta

  • Fasta :-

    MIFLLVITALGHQCIFNEINKNTKKSVLPTLRSSIKSSSSWHPLRFSYDLIGLTDQSYAS QQWCKYTGETIILSSSNIYKCSEDDVLTKEKIEYIDRLFQSLNQSISEVFNVHTINYNKV IPGKKYCGEAVFPETYTIPEESDFHIMVTSHPHTSSGVFAYAAACYFGMDSQVNKRRSVM GYVNIVTSALEPTEERFRDQVGIIFHETMHALGFDGSLGVDKKVGDLNLKVVEDEIVVAR ARKHFGCDNMTYVPLEDGGGRGTANAHWERRIFISEIMNGITSNNPRVSEITLAYFEALG VYKPNYEMADALSWGRGLGCSFLEDCSKWPKQNGYYCRTGVRRCTNDRSAIGICDGNSFK ETLNKSYQHYGDPHIGGSDEIADNCIFVSPIETSYCYQKMSALSFDYYFTLEMLNHGQNF GDTSMCFESSLIKFIPFGINNYHCYSVACMNNSFYKISIDGRYYDCDKSIKVRGYGGKLI CADPKDICGNRVIETWPEIDSVENKTISVGDVLVINGRNLDVVQKVYIDYTSCKILHKSK EQLQIEVDYHDPFISFISFEASLMIEANESVNSCYDHLIKIKVPTYYIFLNFGDWVMTNY IFIAVIPVWIIFFILLFGYYTLKVVVIRQAEEVREAKREINLRLGNLKDKPQKKKQSFCV MF

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
EHI_042870178 SNKRRSVMGY0.992unspEHI_042870178 SNKRRSVMGY0.992unspEHI_042870178 SNKRRSVMGY0.992unspEHI_042870358 SCDGNSFKET0.995unspEHI_04287034 STLRSSIKSS0.997unspEHI_04287040 SKSSSSWHPL0.994unsp

EHI_042870      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India