EHI_050570 | cysteine proteinase, putative

UniProt_ID: C4LTT0

Computed_GO_Component_IDs:
Computed_GO_Components:
Computed_GO_Function_IDs: GO:0004197 GO:0008234
Computed_GO_Functions: cysteine-type endopeptidase activity cysteine-type peptidase activity
Computed_GO_Process_IDs: GO:0006508
Computed_GO_Processes: proteolysis
Curated_GO_Component_IDs:
Curated_GO_Components:
Curated_GO_Function_IDs:
Curated_GO_Functions:
Curated_GO_Processes:

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	EHI_050570	SP	0.010226	0.989439	0.000335	CS pos: 20-21. SWA-AK. Pr: 0.8168

No Results

Fasta :-
>EHI_050570 MFNFLLLVVAASAIDFKSWAAKNNKHFTAVEALRRRAIFNMNAKFVAKFNKEHSFELTVE GPFAAMTNQEYNNLLKTHETEAAADSVYDNTIITASSKDWRAEGKVTPVRDQGNCGSCYS FSSLAVLESRLLIAGSKYNQNNLDLSEQQIVDCSAANNGCNGGSLSATYLYVKNKGVTDE ASYPYTATKGTCKAFTPKVQTTGLTHVTPTEEALTAALAEGPVAVCIDAGKASFQLYKNG VYDEPKCSKTVNHGVAAVGYGSQDGQDYYIVKNSWGTSWGDKGYILMSRNKNNQCAIASV AYFPTGAHDAN
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_050570.fa Sequence name : EHI_050570 Sequence length : 311 VALUES OF COMPUTED PARAMETERS Coef20 : 4.742 CoefTot : 0.335 ChDiff : 0 ZoneTo : 51 KR : 9 DE : 2 CleavSite : 36 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.918 1.665 0.115 0.578 MesoH : -0.432 0.057 -0.333 0.158 MuHd_075 : 41.747 21.754 11.937 8.132 MuHd_095 : 27.002 16.819 7.663 6.150 MuHd_100 : 21.107 14.794 6.806 5.034 MuHd_105 : 23.598 15.350 6.880 5.955 Hmax_075 : 16.683 16.333 2.884 5.705 Hmax_095 : 0.875 8.750 -1.565 2.520 Hmax_100 : -0.300 9.100 -1.764 2.820 Hmax_105 : 4.800 4.300 -1.764 3.650 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6723 0.3277 DFMC : 0.6635 0.3365

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 311 EHI_050570 MFNFLLLVVAASAIDFKSWAAKNNKHFTAVEALRRRAIFNMNAKFVAKFNKEHSFELTVEGPFAAMTNQEYNNLLKTHET 80 EAAADSVYDNTIITASSKDWRAEGKVTPVRDQGNCGSCYSFSSLAVLESRLLIAGSKYNQNNLDLSEQQIVDCSAANNGC 160 NGGSLSATYLYVKNKGVTDEASYPYTATKGTCKAFTPKVQTTGLTHVTPTEEALTAALAEGPVAVCIDAGKASFQLYKNG 240 VYDEPKCSKTVNHGVAAVGYGSQDGQDYYIVKNSWGTSWGDKGYILMSRNKNNQCAIASVAYFPTGAHDAN 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ....................................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_050570 17 ASAIDFK|SW 0.093 . EHI_050570 22 FKSWAAK|NN 0.080 . EHI_050570 25 WAAKNNK|HF 0.081 . EHI_050570 34 TAVEALR|RR 0.073 . EHI_050570 35 AVEALRR|RA 0.105 . EHI_050570 36 VEALRRR|AI 0.136 . EHI_050570 44 IFNMNAK|FV 0.090 . EHI_050570 48 NAKFVAK|FN 0.073 . EHI_050570 51 FVAKFNK|EH 0.075 . EHI_050570 76 EYNNLLK|TH 0.061 . EHI_050570 98 IITASSK|DW 0.079 . EHI_050570 101 ASSKDWR|AE 0.171 . EHI_050570 105 DWRAEGK|VT 0.062 . EHI_050570 110 GKVTPVR|DQ 0.125 . EHI_050570 130 LAVLESR|LL 0.082 . EHI_050570 137 LLIAGSK|YN 0.065 . EHI_050570 173 ATYLYVK|NK 0.060 . EHI_050570 175 YLYVKNK|GV 0.103 . EHI_050570 189 YPYTATK|GT 0.082 . EHI_050570 193 ATKGTCK|AF 0.070 . EHI_050570 198 CKAFTPK|VQ 0.078 . EHI_050570 231 VCIDAGK|AS 0.065 . EHI_050570 238 ASFQLYK|NG 0.059 . EHI_050570 246 GVYDEPK|CS 0.074 . EHI_050570 249 DEPKCSK|TV 0.075 . EHI_050570 272 QDYYIVK|NS 0.058 . EHI_050570 282 GTSWGDK|GY 0.065 . EHI_050570 289 GYILMSR|NK 0.073 . EHI_050570 291 ILMSRNK|NN 0.063 . ____________________________^_________________

Fasta :-
>EHI_050570 ATGTTTAATTTCCTTTTACTTGTAGTTGCTGCATCAGCTATTGACTTTAAGAGTTGGGCT GCTAAGAACAATAAACACTTCACTGCTGTTGAAGCACTCAGAAGAAGAGCTATCTTCAAT ATGAATGCTAAATTTGTTGCTAAATTCAATAAAGAACATTCATTTGAATTAACTGTTGAA GGACCATTTGCTGCTATGACAAATCAAGAATATAATAACTTATTAAAAACACATGAAACT GAAGCAGCTGCTGACTCAGTTTATGATAATACTATTATTACTGCTTCTTCCAAAGATTGG AGAGCTGAAGGTAAAGTTACTCCAGTTAGAGACCAAGGAAATTGTGGATCATGCTATTCA TTCTCATCACTTGCTGTTCTTGAATCAAGATTATTAATTGCTGGAAGCAAATACAACCAA AACAACCTTGATCTTTCTGAACAACAAATTGTTGATTGTAGTGCTGCTAATAATGGATGT AATGGAGGATCTCTTTCTGCTACTTATCTTTATGTTAAAAATAAAGGTGTTACTGATGAA GCCTCATATCCATACACTGCTACTAAGGGAACTTGTAAAGCTTTCACTCCAAAAGTTCAA ACTACTGGTTTAACTCATGTTACTCCAACTGAAGAAGCTTTAACTGCTGCTCTTGCAGAA GGACCAGTTGCTGTTTGTATTGATGCTGGTAAAGCTTCATTCCAATTATATAAAAATGGA GTTTATGATGAACCAAAATGCAGCAAAACTGTTAACCATGGTGTTGCCGCTGTAGGATAT GGATCTCAAGATGGTCAAGACTATTACATTGTTAAGAACTCATGGGGAACTTCATGGGGA GATAAAGGTTATATTTTAATGTCAAGAAATAAGAACAATCAATGTGCTATTGCTTCAGTT GCTTATTTCCCAACTGGTGCTCATGATGCTAATTAA
Download Fasta

Fasta :-

MFNFLLLVVAASAIDFKSWAAKNNKHFTAVEALRRRAIFNMNAKFVAKFNKEHSFELTVE GPFAAMTNQEYNNLLKTHETEAAADSVYDNTIITASSKDWRAEGKVTPVRDQGNCGSCYS FSSLAVLESRLLIAGSKYNQNNLDLSEQQIVDCSAANNGCNGGSLSATYLYVKNKGVTDE ASYPYTATKGTCKAFTPKVQTTGLTHVTPTEEALTAALAEGPVAVCIDAGKASFQLYKNG VYDEPKCSKTVNHGVAAVGYGSQDGQDYYIVKNSWGTSWGDKGYILMSRNKNNQCAIASV AYFPTGAHDAN

Papain-like

title: active site
coordinates: Q112,C118,H253,N273

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	EHI_050570	T	210	0.571	0.593	EHI_050570	T	201	0.552	0.080	EHI_050570	T	208	0.551	0.082	EHI_050570	T	196	0.547	0.079	EHI_050570	T	202	0.521	0.290	EHI_050570	T	205	0.508	0.062

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	EHI_050570	T	210	0.571	0.593	EHI_050570	T	201	0.552	0.080	EHI_050570	T	208	0.551	0.082	EHI_050570	T	196	0.547	0.079	EHI_050570	T	202	0.521	0.290	EHI_050570	T	205	0.508	0.062

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	EHI_050570	86 S	AAADSVYDN	0.995	unsp	EHI_050570	96 S	IITASSKDW	0.997	unsp

EHI_050570 | cysteine proteinase, putative

ID's

UniProt_ID: C4LTT0

GEO Functions

Computed_GO_Component_IDs:

Computed_GO_Components:

Computed_GO_Function_IDs: GO:0004197 GO:0008234

Computed_GO_Functions: cysteine-type endopeptidase activity cysteine-type peptidase activity

Computed_GO_Process_IDs: GO:0006508

Computed_GO_Processes: proteolysis

Curated_GO_Component_IDs:

Curated_GO_Components:

Curated_GO_Function_IDs:

Curated_GO_Functions:

Curated_GO_Processes:

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Papain-like

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

EHI_050570

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India