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  • Fasta :-

    >EHI_051790 MGKNKLTVPKVSLYNPVELKKVLDLGLEEILKTQLKYDIDYWYSNTIIVCSVICSFLGAL AWWYPKPWLESYWHIVAIIIIYIIVDGYLTYIMWFKHSGFAVAIKKPKIEFYSAMISYTP YFQIIMRKDKKEYSIEIEVNKVFDSEGKLLLPLYQGYVEKLINFE
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_051790.fa Sequence name : EHI_051790 Sequence length : 165 VALUES OF COMPUTED PARAMETERS Coef20 : 3.361 CoefTot : -1.164 ChDiff : 2 ZoneTo : 17 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.176 2.194 0.538 0.837 MesoH : 0.666 0.975 -0.085 0.518 MuHd_075 : 26.485 16.796 8.019 4.787 MuHd_095 : 19.112 10.047 4.895 3.378 MuHd_100 : 15.820 7.204 4.407 2.540 MuHd_105 : 6.635 4.005 2.363 0.671 Hmax_075 : 12.250 9.275 1.572 3.771 Hmax_095 : 2.975 5.425 -1.431 2.765 Hmax_100 : 0.000 4.300 -1.771 2.520 Hmax_105 : 7.933 3.850 0.449 3.197 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8833 0.1167 DFMC : 0.9236 0.0764
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 165 EHI_051790 MGKNKLTVPKVSLYNPVELKKVLDLGLEEILKTQLKYDIDYWYSNTIIVCSVICSFLGALAWWYPKPWLESYWHIVAIII 80 IYIIVDGYLTYIMWFKHSGFAVAIKKPKIEFYSAMISYTPYFQIIMRKDKKEYSIEIEVNKVFDSEGKLLLPLYQGYVEK 160 LINFE 240 ................................................................................ 80 ................................................................................ 160 ..... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_051790 3 ----MGK|NK 0.063 . EHI_051790 5 --MGKNK|LT 0.065 . EHI_051790 10 NKLTVPK|VS 0.059 . EHI_051790 20 YNPVELK|KV 0.068 . EHI_051790 21 NPVELKK|VL 0.101 . EHI_051790 32 GLEEILK|TQ 0.052 . EHI_051790 36 ILKTQLK|YD 0.065 . EHI_051790 66 LAWWYPK|PW 0.061 . EHI_051790 96 TYIMWFK|HS 0.074 . EHI_051790 105 GFAVAIK|KP 0.063 . EHI_051790 106 FAVAIKK|PK 0.083 . EHI_051790 108 VAIKKPK|IE 0.066 . EHI_051790 127 YFQIIMR|KD 0.079 . EHI_051790 128 FQIIMRK|DK 0.081 . EHI_051790 130 IIMRKDK|KE 0.137 . EHI_051790 131 IMRKDKK|EY 0.122 . EHI_051790 141 IEIEVNK|VF 0.064 . EHI_051790 148 VFDSEGK|LL 0.055 . EHI_051790 160 YQGYVEK|LI 0.068 . ____________________________^_________________
  • Fasta :-

    >EHI_051790 ATGGGAAAAAACAAGTTAACTGTTCCAAAAGTTTCATTGTATAATCCAGTTGAATTAAAG AAAGTATTAGACTTAGGACTAGAAGAAATTCTTAAAACTCAATTAAAATATGATATTGAT TATTGGTATTCAAATACTATTATTGTTTGTTCTGTCATTTGTTCTTTTTTAGGAGCACTT GCTTGGTGGTATCCAAAACCATGGCTTGAATCATATTGGCATATTGTTGCAATAATTATT ATTTACATTATTGTTGATGGGTATTTAACTTATATTATGTGGTTTAAACATAGTGGTTTT GCTGTTGCAATTAAGAAACCTAAGATAGAGTTTTATAGTGCAATGATTTCTTATACTCCA TATTTTCAAATAATAATGCGTAAAGACAAAAAAGAATACAGTATTGAAATTGAAGTTAAT AAAGTGTTTGATTCTGAAGGTAAATTACTTCTTCCTTTATATCAAGGATATGTGGAAAAA TTAATTAATTTTGAATAA
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EHI_051790      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India