EHI_084060 | cysteine protease, putative

_IDPredictionOTHERSPmTPCS_Position
EHI_084060SP0.0211990.9787950.000007CS pos: 15-16. SEG-NS. Pr: 0.6331
No Results

  • Fasta :-

    >EHI_084060 MIGVVLVLLVLGSEGNSFNLNEDPLKLFEQFKQEYKKEYLTVAEELRRKAIFIQNVEMMR EHNAKGSSYRMGINKFADMESNELLATSSIIQSNRRMGAKRIQEMIRMEKVYSTKQTLKQ AVPDNYTLCTSEAEYNYCGTNNIDQNLCGGCYAIATAHHLSTIYAYLTKQVDNNKPKRKM LSAQQLLDCNTESWGGCGGGFAEDVLDSVDGIYYADDYPFIDADKDCENVTDCAKYRHEC KSLEIDYPLKFATSNKFTHFANKNWEEIKEIIYKYHGFISAMKVTDSLLRYVGGIYKSES CTGKITDHIVVVDGYGECDGHKFLWVRSSWGNDWGVENGHFKIDWNTLCGINGVDEYDDG SQLQNNLYVEMELGTGDTAEYNPKDGAGDDNKDPIGCVIVSPSGDPSNSPEDNKTTGVVM ALFVFLMIFFI
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_084060.fa Sequence name : EHI_084060 Sequence length : 431 VALUES OF COMPUTED PARAMETERS Coef20 : 3.976 CoefTot : 0.100 ChDiff : -20 ZoneTo : 13 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.718 2.600 0.447 0.905 MesoH : -0.985 -0.090 -0.469 0.152 MuHd_075 : 5.171 3.832 1.006 0.642 MuHd_095 : 2.013 2.773 0.472 1.261 MuHd_100 : 6.992 4.707 1.304 1.913 MuHd_105 : 10.635 9.744 2.387 3.328 Hmax_075 : 17.733 20.417 3.481 6.440 Hmax_095 : 16.500 18.200 3.435 6.560 Hmax_100 : 18.900 20.300 3.411 6.720 Hmax_105 : 16.700 17.400 3.394 6.300 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9987 0.0013 DFMC : 0.9965 0.0035
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 431 EHI_084060 MIGVVLVLLVLGSEGNSFNLNEDPLKLFEQFKQEYKKEYLTVAEELRRKAIFIQNVEMMREHNAKGSSYRMGINKFADME 80 SNELLATSSIIQSNRRMGAKRIQEMIRMEKVYSTKQTLKQAVPDNYTLCTSEAEYNYCGTNNIDQNLCGGCYAIATAHHL 160 STIYAYLTKQVDNNKPKRKMLSAQQLLDCNTESWGGCGGGFAEDVLDSVDGIYYADDYPFIDADKDCENVTDCAKYRHEC 240 KSLEIDYPLKFATSNKFTHFANKNWEEIKEIIYKYHGFISAMKVTDSLLRYVGGIYKSESCTGKITDHIVVVDGYGECDG 320 HKFLWVRSSWGNDWGVENGHFKIDWNTLCGINGVDEYDDGSQLQNNLYVEMELGTGDTAEYNPKDGAGDDNKDPIGCVIV 400 SPSGDPSNSPEDNKTTGVVMALFVFLMIFFI 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ............................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_084060 26 LNEDPLK|LF 0.064 . EHI_084060 32 KLFEQFK|QE 0.071 . EHI_084060 36 QFKQEYK|KE 0.053 . EHI_084060 37 FKQEYKK|EY 0.100 . EHI_084060 47 TVAEELR|RK 0.076 . EHI_084060 48 VAEELRR|KA 0.121 . EHI_084060 49 AEELRRK|AI 0.086 . EHI_084060 60 QNVEMMR|EH 0.086 . EHI_084060 65 MREHNAK|GS 0.087 . EHI_084060 70 AKGSSYR|MG 0.131 . EHI_084060 75 YRMGINK|FA 0.090 . EHI_084060 95 SIIQSNR|RM 0.118 . EHI_084060 96 IIQSNRR|MG 0.113 . EHI_084060 100 NRRMGAK|RI 0.087 . EHI_084060 101 RRMGAKR|IQ 0.310 . EHI_084060 107 RIQEMIR|ME 0.079 . EHI_084060 110 EMIRMEK|VY 0.124 . EHI_084060 115 EKVYSTK|QT 0.065 . EHI_084060 119 STKQTLK|QA 0.068 . EHI_084060 169 IYAYLTK|QV 0.076 . EHI_084060 175 KQVDNNK|PK 0.066 . EHI_084060 177 VDNNKPK|RK 0.069 . EHI_084060 178 DNNKPKR|KM 0.173 . EHI_084060 179 NNKPKRK|ML 0.156 . EHI_084060 225 PFIDADK|DC 0.069 . EHI_084060 235 NVTDCAK|YR 0.059 . EHI_084060 237 TDCAKYR|HE 0.130 . EHI_084060 241 KYRHECK|SL 0.092 . EHI_084060 250 EIDYPLK|FA 0.068 . EHI_084060 256 KFATSNK|FT 0.080 . EHI_084060 263 FTHFANK|NW 0.073 . EHI_084060 269 KNWEEIK|EI 0.073 . EHI_084060 274 IKEIIYK|YH 0.074 . EHI_084060 283 GFISAMK|VT 0.065 . EHI_084060 290 VTDSLLR|YV 0.141 . EHI_084060 297 YVGGIYK|SE 0.069 . EHI_084060 304 SESCTGK|IT 0.088 . EHI_084060 322 GECDGHK|FL 0.062 . EHI_084060 327 HKFLWVR|SS 0.137 . EHI_084060 342 VENGHFK|ID 0.070 . EHI_084060 384 TAEYNPK|DG 0.064 . EHI_084060 392 GAGDDNK|DP 0.067 . EHI_084060 414 NSPEDNK|TT 0.072 . ____________________________^_________________

  • Fasta :-

    >EHI_084060 ATGATAGGAGTTGTTTTAGTTTTGCTTGTATTAGGAAGTGAAGGAAATTCGTTTAATTTA AATGAAGATCCACTAAAGTTGTTTGAGCAATTTAAACAAGAATATAAAAAAGAGTATTTG ACTGTTGCTGAAGAGTTAAGAAGAAAAGCTATCTTTATACAAAATGTTGAGATGATGAGA GAGCACAATGCAAAAGGAAGTTCTTATAGAATGGGAATTAATAAATTTGCAGATATGGAA AGCAATGAACTTCTTGCAACATCAAGTATAATCCAAAGTAATAGAAGAATGGGTGCAAAA AGAATTCAAGAAATGATTCGAATGGAAAAAGTATATTCAACAAAACAAACTCTTAAACAA GCTGTTCCAGATAATTATACATTATGTACTTCTGAAGCTGAATATAATTATTGTGGAACC AATAATATTGACCAAAATTTATGTGGTGGATGTTATGCAATTGCAACAGCACATCATTTA TCAACAATCTATGCCTATTTAACTAAACAAGTTGATAATAATAAACCAAAACGAAAAATG TTATCTGCCCAACAATTGCTTGATTGTAATACCGAGTCATGGGGTGGATGTGGAGGAGGA TTTGCTGAAGATGTTCTTGATTCTGTAGATGGAATTTATTATGCAGATGATTATCCATTT ATTGACGCTGATAAAGATTGTGAAAATGTTACAGATTGTGCAAAATATAGACATGAATGT AAATCACTAGAAATCGATTATCCATTAAAATTTGCTACTAGTAATAAATTTACTCACTTT GCCAATAAAAATTGGGAAGAAATAAAAGAAATTATTTATAAATATCATGGATTTATTAGT GCAATGAAAGTTACTGATTCATTATTGAGATATGTAGGTGGTATTTATAAGTCTGAAAGT TGTACTGGAAAAATTACTGATCATATTGTTGTTGTTGATGGTTATGGAGAATGTGATGGA CATAAATTCCTTTGGGTAAGAAGCTCTTGGGGAAATGATTGGGGAGTTGAGAATGGACAT TTCAAAATTGATTGGAACACTCTTTGTGGTATTAATGGCGTTGATGAATATGACGATGGT TCTCAACTTCAAAATAATTTATATGTTGAAATGGAATTAGGAACTGGGGATACTGCTGAA TATAATCCTAAAGATGGTGCTGGTGATGATAATAAAGATCCAATTGGATGCGTTATTGTT AGTCCATCTGGTGATCCATCCAATAGTCCTGAGGATAACAAAACAACAGGAGTTGTTATG GCTTTATTCGTCTTTTTAATGATTTTCTTCATCTAA
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  • Fasta :-

    MIGVVLVLLVLGSEGNSFNLNEDPLKLFEQFKQEYKKEYLTVAEELRRKAIFIQNVEMMR EHNAKGSSYRMGINKFADMESNELLATSSIIQSNRRMGAKRIQEMIRMEKVYSTKQTLKQ AVPDNYTLCTSEAEYNYCGTNNIDQNLCGGCYAIATAHHLSTIYAYLTKQVDNNKPKRKM LSAQQLLDCNTESWGGCGGGFAEDVLDSVDGIYYADDYPFIDADKDCENVTDCAKYRHEC KSLEIDYPLKFATSNKFTHFANKNWEEIKEIIYKYHGFISAMKVTDSLLRYVGGIYKSES CTGKITDHIVVVDGYGECDGHKFLWVRSSWGNDWGVENGHFKIDWNTLCGINGVDEYDDG SQLQNNLYVEMELGTGDTAEYNPKDGAGDDNKDPIGCVIVSPSGDPSNSPEDNKTTGVVM ALFVFLMIFFI

  • title: active site
  • coordinates: Q145,C151,H308,S328
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
EHI_084060113 SEKVYSTKQT0.992unspEHI_084060409 SDPSNSPEDN0.998unsp

EHI_084060      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India