EHI_096740 | cysteine proteinase, putative

_IDPredictionOTHERSPmTPCS_Position
EHI_096740SP0.0629320.9360570.001011CS pos: 17-18. SFA-IN. Pr: 0.7592
No Results

  • Fasta :-

    >EHI_096740 MYRNNLFFLIIVNFSFAINFDQWKIKYNTKYSGSEALRRRAIFLQNSKLIQMINKQNLSF TVTNEGPFSVLTNEEYRMLHHRIDIEKEIKQLKSHRMNLVKKMDNKEVLDSIDWRSEGKV TPVKNQRKCASCYAFGSIATIESLIMQETSIKEIDLSEQQIVDCSQGEYSNWGCTCGNVG NSFNYVRDHGILLERDYPYTGKANNCSIDGKKPVIKIKDYSFVFPQTEENLKIAVYHQPV AVSIDSSQLSFQFYEGGIYDEPNCKWVDHIVTVVGYGTTEEHQDFWVVKNSYGNEWG
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_096740.fa Sequence name : EHI_096740 Sequence length : 297 VALUES OF COMPUTED PARAMETERS Coef20 : 4.650 CoefTot : -1.328 ChDiff : -2 ZoneTo : 64 KR : 9 DE : 2 CleavSite : 40 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.241 1.547 0.310 0.636 MesoH : -0.956 -0.058 -0.421 0.165 MuHd_075 : 37.753 19.673 10.056 8.579 MuHd_095 : 31.818 19.209 9.041 7.663 MuHd_100 : 25.936 15.559 6.853 6.559 MuHd_105 : 28.548 15.765 7.482 5.928 Hmax_075 : 8.300 8.500 0.025 4.080 Hmax_095 : 6.200 12.100 0.005 4.290 Hmax_100 : -3.200 13.100 -0.013 4.940 Hmax_105 : -3.733 12.100 -0.774 4.670 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.3502 0.6498 DFMC : 0.6159 0.3841
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 297 EHI_096740 MYRNNLFFLIIVNFSFAINFDQWKIKYNTKYSGSEALRRRAIFLQNSKLIQMINKQNLSFTVTNEGPFSVLTNEEYRMLH 80 HRIDIEKEIKQLKSHRMNLVKKMDNKEVLDSIDWRSEGKVTPVKNQRKCASCYAFGSIATIESLIMQETSIKEIDLSEQQ 160 IVDCSQGEYSNWGCTCGNVGNSFNYVRDHGILLERDYPYTGKANNCSIDGKKPVIKIKDYSFVFPQTEENLKIAVYHQPV 240 AVSIDSSQLSFQFYEGGIYDEPNCKWVDHIVTVVGYGTTEEHQDFWVVKNSYGNEWG 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ......................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_096740 3 ----MYR|NN 0.074 . EHI_096740 24 INFDQWK|IK 0.060 . EHI_096740 26 FDQWKIK|YN 0.083 . EHI_096740 30 KIKYNTK|YS 0.072 . EHI_096740 38 SGSEALR|RR 0.078 . EHI_096740 39 GSEALRR|RA 0.148 . EHI_096740 40 SEALRRR|AI 0.165 . EHI_096740 48 IFLQNSK|LI 0.057 . EHI_096740 55 LIQMINK|QN 0.061 . EHI_096740 77 LTNEEYR|ML 0.115 . EHI_096740 82 YRMLHHR|ID 0.115 . EHI_096740 87 HRIDIEK|EI 0.071 . EHI_096740 90 DIEKEIK|QL 0.062 . EHI_096740 93 KEIKQLK|SH 0.075 . EHI_096740 96 KQLKSHR|MN 0.087 . EHI_096740 101 HRMNLVK|KM 0.075 . EHI_096740 102 RMNLVKK|MD 0.127 . EHI_096740 106 VKKMDNK|EV 0.086 . EHI_096740 115 LDSIDWR|SE 0.248 . EHI_096740 119 DWRSEGK|VT 0.060 . EHI_096740 124 GKVTPVK|NQ 0.059 . EHI_096740 127 TPVKNQR|KC 0.080 . EHI_096740 128 PVKNQRK|CA 0.107 . EHI_096740 152 MQETSIK|EI 0.076 . EHI_096740 187 NSFNYVR|DH 0.112 . EHI_096740 195 HGILLER|DY 0.085 . EHI_096740 202 DYPYTGK|AN 0.064 . EHI_096740 211 NCSIDGK|KP 0.066 . EHI_096740 212 CSIDGKK|PV 0.138 . EHI_096740 216 GKKPVIK|IK 0.073 . EHI_096740 218 KPVIKIK|DY 0.124 . EHI_096740 232 QTEENLK|IA 0.060 . EHI_096740 265 YDEPNCK|WV 0.085 . EHI_096740 289 QDFWVVK|NS 0.075 . ____________________________^_________________

  • Fasta :-

    >EHI_096740 ATGTATCGAAATAACCTTTTTTTTCTTATTATTGTTAATTTTAGTTTTGCTATCAATTTT GATCAATGGAAAATCAAATACAATACAAAATATTCAGGAAGTGAGGCATTAAGAAGAAGA GCAATATTTCTTCAAAATTCAAAATTAATTCAAATGATCAATAAACAAAACCTTTCGTTT ACTGTCACTAATGAAGGTCCTTTCAGTGTATTAACAAATGAAGAATACAGAATGCTTCAT CATCGTATTGACATAGAAAAAGAAATAAAACAATTGAAATCTCATAGAATGAATTTGGTT AAAAAGATGGATAATAAAGAAGTACTTGACAGCATTGATTGGAGAAGTGAAGGGAAAGTA ACTCCAGTAAAGAATCAAAGAAAATGTGCTTCATGCTATGCTTTTGGAAGTATTGCAACA ATAGAATCATTAATAATGCAAGAAACTTCTATTAAAGAAATTGATTTATCTGAACAACAA ATAGTAGATTGTAGTCAAGGAGAATATTCTAATTGGGGATGTACATGTGGGAATGTAGGA AATAGTTTTAATTATGTAAGAGATCATGGGATTCTTCTTGAGAGGGATTATCCTTATACT GGCAAAGCAAATAATTGTTCTATTGATGGTAAAAAACCAGTAATAAAAATAAAAGACTAC TCTTTTGTTTTTCCACAAACAGAAGAAAATTTAAAAATTGCAGTATATCATCAACCTGTA GCAGTATCTATTGATTCCTCACAACTAAGTTTTCAATTTTATGAAGGGGGAATTTATGAT GAACCAAACTGTAAATGGGTAGATCATATTGTAACAGTTGTTGGATATGGAACAACAGAA GAACATCAAGATTTCTGGGTTGTTAAAAATTCTTATGGAAATGAATGGGGTTAA
  • Download Fasta

  • Fasta :-

    MYRNNLFFLIIVNFSFAINFDQWKIKYNTKYSGSEALRRRAIFLQNSKLIQMINKQNLSF TVTNEGPFSVLTNEEYRMLHHRIDIEKEIKQLKSHRMNLVKKMDNKEVLDSIDWRSEGKV TPVKNQRKCASCYAFGSIATIESLIMQETSIKEIDLSEQQIVDCSQGEYSNWGCTCGNVG NSFNYVRDHGILLERDYPYTGKANNCSIDGKKPVIKIKDYSFVFPQTEENLKIAVYHQPV AVSIDSSQLSFQFYEGGIYDEPNCKWVDHIVTVVGYGTTEEHQDFWVVKNSYGNEWG

  • title: active site
  • coordinates: Q126,C132,H269,N290
No Results
No Results
IDSitePeptideScoreMethod
EHI_096740150 SMQETSIKEI0.996unsp

EHI_096740      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India