EHI_104610 | hypothetical protein, conserved

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_IDPredictionOTHERSPmTPCS_Position
EHI_104610OTHER0.9999630.0000290.000008
No Results

  • Fasta :-

    >EHI_104610 MNEIIDVDEYEQAPDFVFYNDPYCFRTTEEIIGVEDFEEGEDELKELNKTKENYFIVETT GFDMFNYDGLQLTQDITYFKIHFKEAVDYIKSIIQLDIIDIHDVFQNINKMIFRGHITNT IIEWSKRMTVCAGICYGKSNGCVIRLSEGILKYRSIYDVVTTIVHESIHAFLFRTKTRDN DSHGIRFHQWMTIINEKTPLHVTVYHTFYEECKNLHKHIWRCTGPCRNKPPFYGYVKRSM NRAPGPTDRWYEQHKKHCDGHFVKIDGPEFHEETLAKKPKRKERKSHTNKKEVKSKDLKD LFNELKKKKQ
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_104610.fa Sequence name : EHI_104610 Sequence length : 310 VALUES OF COMPUTED PARAMETERS Coef20 : 2.824 CoefTot : -0.134 ChDiff : 0 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.759 1.035 0.242 0.468 MesoH : -0.762 0.347 -0.375 0.193 MuHd_075 : 9.384 6.127 3.768 2.107 MuHd_095 : 14.552 8.782 3.072 1.951 MuHd_100 : 2.280 3.206 1.480 1.186 MuHd_105 : 18.974 13.681 5.984 4.081 Hmax_075 : 3.617 9.917 -0.300 4.667 Hmax_095 : -2.363 4.375 -3.257 2.424 Hmax_100 : -5.300 3.200 -3.602 2.600 Hmax_105 : 7.000 12.500 0.083 4.820 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9006 0.0994 DFMC : 0.9608 0.0392
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 310 EHI_104610 MNEIIDVDEYEQAPDFVFYNDPYCFRTTEEIIGVEDFEEGEDELKELNKTKENYFIVETTGFDMFNYDGLQLTQDITYFK 80 IHFKEAVDYIKSIIQLDIIDIHDVFQNINKMIFRGHITNTIIEWSKRMTVCAGICYGKSNGCVIRLSEGILKYRSIYDVV 160 TTIVHESIHAFLFRTKTRDNDSHGIRFHQWMTIINEKTPLHVTVYHTFYEECKNLHKHIWRCTGPCRNKPPFYGYVKRSM 240 NRAPGPTDRWYEQHKKHCDGHFVKIDGPEFHEETLAKKPKRKERKSHTNKKEVKSKDLKDLFNELKKKKQ 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ...................................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_104610 26 NDPYCFR|TT 0.101 . EHI_104610 45 EGEDELK|EL 0.056 . EHI_104610 49 ELKELNK|TK 0.064 . EHI_104610 51 KELNKTK|EN 0.074 . EHI_104610 80 QDITYFK|IH 0.060 . EHI_104610 84 YFKIHFK|EA 0.075 . EHI_104610 91 EAVDYIK|SI 0.076 . EHI_104610 110 VFQNINK|MI 0.073 . EHI_104610 114 INKMIFR|GH 0.099 . EHI_104610 126 TIIEWSK|RM 0.058 . EHI_104610 127 IIEWSKR|MT 0.203 . EHI_104610 138 AGICYGK|SN 0.089 . EHI_104610 145 SNGCVIR|LS 0.128 . EHI_104610 152 LSEGILK|YR 0.064 . EHI_104610 154 EGILKYR|SI 0.183 . EHI_104610 174 IHAFLFR|TK 0.096 . EHI_104610 176 AFLFRTK|TR 0.057 . EHI_104610 178 LFRTKTR|DN 0.146 . EHI_104610 186 NDSHGIR|FH 0.098 . EHI_104610 197 MTIINEK|TP 0.057 . EHI_104610 213 TFYEECK|NL 0.068 . EHI_104610 217 ECKNLHK|HI 0.062 . EHI_104610 221 LHKHIWR|CT 0.144 . EHI_104610 227 RCTGPCR|NK 0.075 . EHI_104610 229 TGPCRNK|PP 0.058 . EHI_104610 237 PFYGYVK|RS 0.055 . EHI_104610 238 FYGYVKR|SM 0.279 . EHI_104610 242 VKRSMNR|AP 0.101 . EHI_104610 249 APGPTDR|WY 0.133 . EHI_104610 255 RWYEQHK|KH 0.071 . EHI_104610 256 WYEQHKK|HC 0.115 . EHI_104610 264 CDGHFVK|ID 0.086 . EHI_104610 277 HEETLAK|KP 0.068 . EHI_104610 278 EETLAKK|PK 0.088 . EHI_104610 280 TLAKKPK|RK 0.090 . EHI_104610 281 LAKKPKR|KE 0.218 . EHI_104610 282 AKKPKRK|ER 0.082 . EHI_104610 284 KPKRKER|KS 0.446 . EHI_104610 285 PKRKERK|SH 0.144 . EHI_104610 290 RKSHTNK|KE 0.068 . EHI_104610 291 KSHTNKK|EV 0.153 . EHI_104610 294 TNKKEVK|SK 0.085 . EHI_104610 296 KKEVKSK|DL 0.100 . EHI_104610 299 VKSKDLK|DL 0.086 . EHI_104610 306 DLFNELK|KK 0.061 . EHI_104610 307 LFNELKK|KK 0.085 . EHI_104610 308 FNELKKK|KQ 0.094 . EHI_104610 309 NELKKKK|Q- 0.106 . ____________________________^_________________

  • Fasta :-

    >EHI_104610 ATGAACGAAATTATTGATGTTGATGAATATGAACAAGCACCAGATTTTGTGTTTTATAAT GATCCTTATTGTTTTCGTACAACAGAAGAAATAATTGGTGTTGAAGATTTTGAAGAAGGT GAAGACGAATTAAAAGAATTAAATAAAACCAAAGAAAATTATTTTATTGTTGAAACTACT GGGTTTGATATGTTTAATTATGATGGATTACAACTAACACAAGATATTACATACTTTAAA ATACACTTTAAAGAAGCTGTGGATTATATTAAATCAATTATTCAATTGGATATTATTGAT ATTCATGACGTTTTTCAAAATATTAATAAAATGATTTTTAGAGGACATATAACAAATACA ATCATTGAATGGTCAAAAAGAATGACTGTATGTGCTGGAATATGTTATGGTAAAAGTAAT GGATGTGTTATTCGTTTGTCTGAAGGAATATTAAAATATCGAAGTATTTATGATGTTGTT ACAACCATTGTACATGAAAGTATTCATGCATTTTTGTTTAGAACAAAAACAAGGGATAAT GATTCACATGGAATTCGGTTTCATCAATGGATGACAATTATTAATGAAAAAACACCATTA CATGTTACTGTTTATCATACATTCTACGAAGAATGTAAAAATTTACATAAACACATTTGG AGGTGTACTGGTCCTTGTAGAAATAAACCACCATTCTATGGATATGTTAAAAGGTCAATG AATAGAGCACCAGGACCAACAGATAGATGGTATGAACAACATAAAAAACATTGTGATGGT CATTTTGTTAAAATAGATGGACCAGAATTTCATGAAGAGACATTAGCAAAAAAACCAAAA AGAAAAGAAAGAAAGTCACACACCAATAAAAAAGAAGTAAAAAGCAAAGATTTAAAAGAC TTATTTAATGAACTTAAAAAGAAAAAACAATAA
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  • Fasta :-

    MNEIIDVDEYEQAPDFVFYNDPYCFRTTEEIIGVEDFEEGEDELKELNKTKENYFIVETT GFDMFNYDGLQLTQDITYFKIHFKEAVDYIKSIIQLDIIDIHDVFQNINKMIFRGHITNT IIEWSKRMTVCAGICYGKSNGCVIRLSEGILKYRSIYDVVTTIVHESIHAFLFRTKTRDN DSHGIRFHQWMTIINEKTPLHVTVYHTFYEECKNLHKHIWRCTGPCRNKPPFYGYVKRSM NRAPGPTDRWYEQHKKHCDGHFVKIDGPEFHEETLAKKPKRKERKSHTNKKEVKSKDLKD LFNELKKKKQ

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
EHI_104610155 SLKYRSIYDV0.991unspEHI_104610286 SKERKSHTNK0.998unsp

EHI_104610      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India