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  • Fasta :-

    >EHI_105770 MGKDKLTVPKVSLYNPVELKKVLDLGLEEILKTQLKYDIDYWYSNTIIVCSVICSFLGAL AWWYPKPWPESYWHIVAIIIIYIIVDGYLTYIMWFKHSGFAVAIKKPKIEFYSAMISYTP YFQIIMYKDKKEYSIEIEVNKVFDSEGKLLLPLYQGYVEKLINFE
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_105770.fa Sequence name : EHI_105770 Sequence length : 165 VALUES OF COMPUTED PARAMETERS Coef20 : 3.257 CoefTot : -1.268 ChDiff : 0 ZoneTo : 17 KR : 3 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.176 2.194 0.538 0.837 MesoH : 0.623 0.898 -0.100 0.504 MuHd_075 : 30.321 16.796 8.265 4.875 MuHd_095 : 19.349 10.047 4.924 3.430 MuHd_100 : 18.801 7.204 4.651 2.645 MuHd_105 : 11.035 4.005 2.670 0.780 Hmax_075 : 12.250 9.275 1.572 3.771 Hmax_095 : 2.975 5.425 -1.431 2.765 Hmax_100 : 0.000 4.300 -1.771 2.520 Hmax_105 : 7.933 3.850 0.449 3.197 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9715 0.0285 DFMC : 0.9816 0.0184
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 165 EHI_105770 MGKDKLTVPKVSLYNPVELKKVLDLGLEEILKTQLKYDIDYWYSNTIIVCSVICSFLGALAWWYPKPWPESYWHIVAIII 80 IYIIVDGYLTYIMWFKHSGFAVAIKKPKIEFYSAMISYTPYFQIIMYKDKKEYSIEIEVNKVFDSEGKLLLPLYQGYVEK 160 LINFE 240 ................................................................................ 80 ................................................................................ 160 ..... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_105770 3 ----MGK|DK 0.074 . EHI_105770 5 --MGKDK|LT 0.066 . EHI_105770 10 DKLTVPK|VS 0.058 . EHI_105770 20 YNPVELK|KV 0.068 . EHI_105770 21 NPVELKK|VL 0.101 . EHI_105770 32 GLEEILK|TQ 0.052 . EHI_105770 36 ILKTQLK|YD 0.065 . EHI_105770 66 LAWWYPK|PW 0.063 . EHI_105770 96 TYIMWFK|HS 0.074 . EHI_105770 105 GFAVAIK|KP 0.063 . EHI_105770 106 FAVAIKK|PK 0.083 . EHI_105770 108 VAIKKPK|IE 0.066 . EHI_105770 128 FQIIMYK|DK 0.064 . EHI_105770 130 IIMYKDK|KE 0.069 . EHI_105770 131 IMYKDKK|EY 0.110 . EHI_105770 141 IEIEVNK|VF 0.064 . EHI_105770 148 VFDSEGK|LL 0.055 . EHI_105770 160 YQGYVEK|LI 0.068 . ____________________________^_________________
  • Fasta :-

    >EHI_105770 ATGGGAAAAGACAAGTTAACAGTTCCAAAAGTTTCATTGTATAATCCAGTTGAATTAAAG AAAGTATTAGACTTAGGACTAGAAGAAATTCTTAAAACTCAATTAAAATATGATATTGAT TATTGGTATTCAAATACTATTATTGTTTGTTCTGTCATTTGTTCTTTTTTAGGAGCACTT GCTTGGTGGTATCCAAAACCATGGCCTGAATCATATTGGCATATTGTTGCAATAATTATT ATTTACATTATTGTTGATGGGTATTTAACTTATATTATGTGGTTTAAACATAGTGGTTTT GCTGTTGCAATTAAGAAACCTAAGATAGAGTTTTATAGTGCAATGATTTCTTATACTCCA TATTTTCAAATAATAATGTATAAAGACAAAAAAGAATACAGTATTGAAATTGAAGTTAAT AAAGTGTTTGATTCTGAAGGTAAATTACTTCTTCCTTTATATCAAGGATATGTGGAAAAA TTAATTAATTTTGAATAA
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EHI_105770      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India