EHI_126880 | methionine aminopeptidase, putative

UniProt_ID: C4LWW4

Computed_GO_Component_IDs:
Computed_GO_Components:
Computed_GO_Function_IDs: GO:0004177 GO:0008235 GO:0004239
Computed_GO_Functions: aminopeptidase activity metalloexopeptidase activity obsolete methionyl aminopeptidase activity
Computed_GO_Process_IDs: GO:0006508
Computed_GO_Processes: proteolysis
Curated_GO_Component_IDs:
Curated_GO_Components:
Curated_GO_Function_IDs:
Curated_GO_Functions:
Curated_GO_Processes:

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	EHI_126880	OTHER	0.999979	0.000006	0.000015

No Results

Fasta :-
>EHI_126880 MQATGKPHSKTSKSKKSGSKANKKPATSSVKPNTPAAPVDPSVIPPEIKEPTETLSTMYK DEKCFPEGENMQYTQEWNLQRFTSAEARERERALIDIEDYRKAAAIHKSVRQWAQQWIKP GMSDLFVAENIERKVREECEVDGVNTTERGMAFPCGLSVNSCAAHFTPNPNDPLSFYKTD DVVKIDFGVHVNGHLIDSAFTMTWDPALQPILDCSKDATNTGIKNIGVDVRLCDIGDAIE EVMSSYEVEIKGKTYQLQPVRNLSGHMVGSYAVHAGKSIPICKGGPQTKMEEGEVYALET FATTGRGRVDDSGPASHYMVDANAFDYPVRDGNAKRLLHALDANFKTLAFCRRYVDKIGF AKWQMPFKFLVDDGCVNAYPPLSDCHGSYVAQFEHTIYLKPTCKEVLSRSFDY
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_126880.fa Sequence name : EHI_126880 Sequence length : 413 VALUES OF COMPUTED PARAMETERS Coef20 : 3.402 CoefTot : -1.955 ChDiff : -5 ZoneTo : 39 KR : 9 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.200 0.894 0.129 0.425 MesoH : -0.549 0.140 -0.406 0.197 MuHd_075 : 28.031 13.627 7.669 4.980 MuHd_095 : 36.907 15.709 11.548 7.202 MuHd_100 : 28.363 10.260 8.669 5.528 MuHd_105 : 37.362 13.883 10.919 7.106 Hmax_075 : -3.800 4.550 -3.116 -1.130 Hmax_095 : 4.800 1.500 -0.832 1.980 Hmax_100 : 5.400 1.800 -0.464 0.630 Hmax_105 : 5.600 -2.917 -0.402 0.945 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0826 0.9174 DFMC : 0.0281 0.9719 This protein is probably imported in chloroplast. f(Ser) = 0.1795 f(Arg) = 0.0000 CMi = 2.56410 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 413 EHI_126880 MQATGKPHSKTSKSKKSGSKANKKPATSSVKPNTPAAPVDPSVIPPEIKEPTETLSTMYKDEKCFPEGENMQYTQEWNLQ 80 RFTSAEARERERALIDIEDYRKAAAIHKSVRQWAQQWIKPGMSDLFVAENIERKVREECEVDGVNTTERGMAFPCGLSVN 160 SCAAHFTPNPNDPLSFYKTDDVVKIDFGVHVNGHLIDSAFTMTWDPALQPILDCSKDATNTGIKNIGVDVRLCDIGDAIE 240 EVMSSYEVEIKGKTYQLQPVRNLSGHMVGSYAVHAGKSIPICKGGPQTKMEEGEVYALETFATTGRGRVDDSGPASHYMV 320 DANAFDYPVRDGNAKRLLHALDANFKTLAFCRRYVDKIGFAKWQMPFKFLVDDGCVNAYPPLSDCHGSYVAQFEHTIYLK 400 PTCKEVLSRSFDY 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ............. 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_126880 6 -MQATGK|PH 0.062 . EHI_126880 10 TGKPHSK|TS 0.067 . EHI_126880 13 PHSKTSK|SK 0.093 . EHI_126880 15 SKTSKSK|KS 0.075 . EHI_126880 16 KTSKSKK|SG 0.353 . EHI_126880 20 SKKSGSK|AN 0.062 . EHI_126880 23 SGSKANK|KP 0.065 . EHI_126880 24 GSKANKK|PA 0.116 . EHI_126880 31 PATSSVK|PN 0.063 . EHI_126880 49 VIPPEIK|EP 0.061 . EHI_126880 60 TLSTMYK|DE 0.082 . EHI_126880 63 TMYKDEK|CF 0.075 . EHI_126880 81 QEWNLQR|FT 0.124 . EHI_126880 88 FTSAEAR|ER 0.113 . EHI_126880 90 SAEARER|ER 0.068 . EHI_126880 92 EARERER|AL 0.117 . EHI_126880 101 IDIEDYR|KA 0.102 . EHI_126880 102 DIEDYRK|AA 0.073 . EHI_126880 108 KAAAIHK|SV 0.133 . EHI_126880 111 AIHKSVR|QW 0.135 . EHI_126880 119 WAQQWIK|PG 0.062 . EHI_126880 133 VAENIER|KV 0.092 . EHI_126880 134 AENIERK|VR 0.084 . EHI_126880 136 NIERKVR|EE 0.207 . EHI_126880 149 GVNTTER|GM 0.078 . EHI_126880 178 DPLSFYK|TD 0.066 . EHI_126880 184 KTDDVVK|ID 0.061 . EHI_126880 216 PILDCSK|DA 0.062 . EHI_126880 224 ATNTGIK|NI 0.065 . EHI_126880 231 NIGVDVR|LC 0.096 . EHI_126880 251 SYEVEIK|GK 0.067 . EHI_126880 253 EVEIKGK|TY 0.059 . EHI_126880 261 YQLQPVR|NL 0.091 . EHI_126880 277 YAVHAGK|SI 0.081 . EHI_126880 283 KSIPICK|GG 0.065 . EHI_126880 289 KGGPQTK|ME 0.072 . EHI_126880 306 TFATTGR|GR 0.074 . EHI_126880 308 ATTGRGR|VD 0.085 . EHI_126880 330 AFDYPVR|DG 0.093 . EHI_126880 335 VRDGNAK|RL 0.069 . EHI_126880 336 RDGNAKR|LL 0.205 . EHI_126880 346 ALDANFK|TL 0.057 . EHI_126880 352 KTLAFCR|RY 0.082 . EHI_126880 353 TLAFCRR|YV 0.494 . EHI_126880 357 CRRYVDK|IG 0.083 . EHI_126880 362 DKIGFAK|WQ 0.067 . EHI_126880 368 KWQMPFK|FL 0.072 . EHI_126880 400 EHTIYLK|PT 0.061 . EHI_126880 404 YLKPTCK|EV 0.061 . EHI_126880 409 CKEVLSR|SF 0.150 . ____________________________^_________________

Fasta :-
>EHI_126880 ATGCAAGCTACGGGAAAACCACATTCAAAAACTTCTAAGTCTAAAAAATCTGGTTCAAAA GCTAATAAAAAACCAGCAACTTCAAGTGTTAAACCAAATACACCAGCTGCACCAGTTGAT CCATCAGTAATTCCACCTGAAATTAAAGAACCAACTGAAACTTTATCTACTATGTATAAA GATGAAAAATGTTTCCCAGAAGGAGAAAATATGCAATATACACAAGAATGGAACTTACAA AGATTCACAAGTGCTGAAGCTAGAGAACGTGAAAGAGCATTAATTGATATTGAAGATTAT AGAAAAGCTGCAGCAATTCATAAAAGTGTTAGACAATGGGCTCAACAATGGATTAAACCA GGAATGTCAGATCTTTTTGTTGCAGAAAATATTGAGAGAAAAGTTAGAGAAGAATGTGAA GTTGATGGAGTAAATACTACAGAACGAGGTATGGCTTTTCCTTGTGGTCTTTCTGTAAAT TCATGTGCAGCACATTTCACACCAAATCCAAATGATCCATTATCATTCTATAAAACTGAT GATGTTGTTAAAATTGATTTTGGAGTACATGTTAATGGTCATTTAATTGATTCAGCTTTT ACCATGACTTGGGATCCTGCTTTACAACCAATTCTTGATTGCTCTAAAGATGCTACTAAT ACAGGTATTAAAAATATTGGTGTTGATGTTAGATTATGTGATATAGGTGATGCTATTGAA GAAGTTATGAGCAGTTATGAAGTTGAAATTAAAGGAAAAACTTATCAATTACAACCAGTT AGAAACCTTTCTGGACATATGGTTGGTTCATATGCTGTTCATGCTGGTAAATCTATTCCA ATTTGTAAAGGTGGACCTCAAACTAAAATGGAAGAAGGTGAAGTTTATGCTCTTGAAACA TTTGCTACTACTGGCAGAGGACGTGTTGATGACTCAGGACCTGCTTCTCATTATATGGTT GATGCTAATGCATTTGATTATCCAGTTAGAGATGGAAATGCAAAGAGATTACTTCATGCT CTTGACGCTAATTTCAAGACATTAGCTTTTTGTAGAAGATATGTTGACAAAATTGGATTT GCTAAATGGCAAATGCCATTTAAATTCCTTGTTGATGATGGATGTGTTAATGCATATCCA CCATTATCAGATTGTCACGGAAGTTATGTTGCACAATTTGAGCATACCATTTATCTTAAG CCAACTTGTAAGGAAGTTCTTTCAAGAAGTTTTGATTATTAA
Download Fasta

Fasta :-

MQATGKPHSKTSKSKKSGSKANKKPATSSVKPNTPAAPVDPSVIPPEIKEPTETLSTMYK DEKCFPEGENMQYTQEWNLQRFTSAEARERERALIDIEDYRKAAAIHKSVRQWAQQWIKP GMSDLFVAENIERKVREECEVDGVNTTERGMAFPCGLSVNSCAAHFTPNPNDPLSFYKTD DVVKIDFGVHVNGHLIDSAFTMTWDPALQPILDCSKDATNTGIKNIGVDVRLCDIGDAIE EVMSSYEVEIKGKTYQLQPVRNLSGHMVGSYAVHAGKSIPICKGGPQTKMEEGEVYALET FATTGRGRVDDSGPASHYMVDANAFDYPVRDGNAKRLLHALDANFKTLAFCRRYVDKIGF AKWQMPFKFLVDDGCVNAYPPLSDCHGSYVAQFEHTIYLKPTCKEVLSRSFDY

Creatinase/aminopeptidase

title: active site
coordinates: H165,D186,D197,H266,E299,E394

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	EHI_126880	T	27	0.643	0.150	EHI_126880	T	34	0.643	0.073	EHI_126880	S	42	0.601	0.500	EHI_126880	T	4	0.592	0.431	EHI_126880	T	52	0.531	0.074	EHI_126880	S	29	0.524	0.415	EHI_126880	S	28	0.514	0.118

	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore	ID	Site	Position	Gscore	Iscore
	EHI_126880	T	27	0.643	0.150	EHI_126880	T	34	0.643	0.073	EHI_126880	S	42	0.601	0.500	EHI_126880	T	4	0.592	0.431	EHI_126880	T	52	0.531	0.074	EHI_126880	S	29	0.524	0.415	EHI_126880	S	28	0.514	0.118

	ID	Site	Peptide	Score	Method
	EHI_126880	14 S	KTSKSKKSG	0.997	unsp

EHI_126880 | methionine aminopeptidase, putative

ID's

UniProt_ID: C4LWW4

GEO Functions

Computed_GO_Component_IDs:

Computed_GO_Components:

Computed_GO_Function_IDs: GO:0004177 GO:0008235 GO:0004239

Computed_GO_Functions: aminopeptidase activity metalloexopeptidase activity obsolete methionyl aminopeptidase activity

Computed_GO_Process_IDs: GO:0006508

Computed_GO_Processes: proteolysis

Curated_GO_Component_IDs:

Curated_GO_Components:

Curated_GO_Function_IDs:

Curated_GO_Functions:

Curated_GO_Processes:

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Creatinase/aminopeptidase

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

EHI_126880

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India