EHI_127470 | cysteine proteinase, pseudogene

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EHI_127470OTHER0.5549910.3729570.072052
No Results

  • Fasta :-

    >EHI_127470 MLFYTFSSIGTLERRIINEKDGDDKILDIPGEHVVQCNNENKNN*CDG*FCSNIYSYNI* N*ND*EMIKYKMKVIRHVELM*FNLLKSIIIRELQETMKLKLKQHFHNILLMFQLMNHLL NSNYTKVEQILIFN*E*LHYI
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_127470.fa Sequence name : EHI_127470 Sequence length : 141 VALUES OF COMPUTED PARAMETERS Coef20 : 4.339 CoefTot : 0.061 ChDiff : -1 ZoneTo : 12 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.435 1.083 -0.201 0.377 MesoH : -1.111 0.126 -0.675 0.121 MuHd_075 : 31.580 21.313 7.421 7.185 MuHd_095 : 22.609 20.023 6.077 7.089 MuHd_100 : 24.767 24.285 7.004 8.291 MuHd_105 : 22.419 23.216 6.676 8.109 Hmax_075 : 18.113 17.900 3.413 5.970 Hmax_095 : 13.500 16.450 2.113 5.556 Hmax_100 : 17.000 17.000 3.122 6.240 Hmax_105 : 19.483 21.817 4.121 7.175 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.3837 0.6163 DFMC : 0.5547 0.4453
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 141 EHI_127470 MLFYTFSSIGTLERRIINEKDGDDKILDIPGEHVVQCNNENKNNXCDGXFCSNIYSYNIXNXNDXEMIKYKMKVIRHVEL 80 MXFNLLKSIIIRELQETMKLKLKQHFHNILLMFQLMNHLLNSNYTKVEQILIFNXEXLHYI 160 ................................................................................ 80 ............................................................. 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_127470 14 SIGTLER|RI 0.084 . EHI_127470 15 IGTLERR|II 0.114 . EHI_127470 20 RRIINEK|DG 0.082 . EHI_127470 25 EKDGDDK|IL 0.065 . EHI_127470 42 QCNNENK|NN 0.065 . EHI_127470 69 NDXEMIK|YK 0.078 . EHI_127470 71 XEMIKYK|MK 0.065 . EHI_127470 73 MIKYKMK|VI 0.087 . EHI_127470 76 YKMKVIR|HV 0.201 . EHI_127470 87 MXFNLLK|SI 0.107 . EHI_127470 92 LKSIIIR|EL 0.102 . EHI_127470 99 ELQETMK|LK 0.060 . EHI_127470 101 QETMKLK|LK 0.060 . EHI_127470 103 TMKLKLK|QH 0.065 . EHI_127470 126 LNSNYTK|VE 0.067 . ____________________________^_________________

  • Fasta :-

    >EHI_127470 ATGTTATTTTATACATTTAGTTCAATTGGAACACTTGAAAGAAGAATAATAAATGAGAAA GATGGTGATGATAAGATACTTGATATTCCAGGAGAACATGTTGTTCAGTGTAATAACGAG AATAAAAATAATTGATGTGATGGATGATTTTGTTCAAATATTTATAGTTATAATATATGA AATTGAAATGATTAAGAAATGATTAAATATAAAATGAAAGTAATTCGACATGTAGAATTG ATGTAATTCAATTTGCTAAAATCAATAATTATAAGAGAATTACAAGAAACAATGAAATTG AAGTTAAAACAACATTTTCACAATATCTTATTGATGTTTCAATTGATGAATCATTTATTA AATTCCAATTATACAAAAGTGGAACAAATATTGATATTCAATTAAGAATAACTTCATTAT ATTGA
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  • Fasta :-

    MLFYTFSSIGTLERRIINEKDGDDKILDIPGEHVVQCNNENKNN

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EHI_127470      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India