EHI_131090 | ubiquitin carboxyl-terminal hydrolase domain containing protein

_IDPredictionOTHERSPmTPCS_Position
EHI_131090OTHER0.9832910.0009050.015804
No Results

  • Fasta :-

    >EHI_131090 MSQSVKPKSLNLKKAYPLFGIKNFRSTCFANSVFQVLCSLPPFVEYLKKVNPTDDMKYTK AIKDMFNLFLQCNKVGIQKEIIHPPQSMKEIIMKLQTESGQHQMDATEFYTTLINCLHTE CKNKISEGEEAQQDDDEGWEEVGKKFKKVQLRSEKTDGTSVISDYFRGSMRSLTITIDEM KKKHNQAVLQEFYVLSLPIQSKQNCVSSVSQAINLAFSKRKIDNTHFQQLFIEEAPKVLV LQLNRFIYDRVKLDVVKLVDHINYTESLQLKTNKGNVNYRLISIIEHRGNQIRRGHYVSY VRRGEKWYFCNDENIQLIDQKDIYDKMAYVLIYSSLN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_131090.fa Sequence name : EHI_131090 Sequence length : 337 VALUES OF COMPUTED PARAMETERS Coef20 : 3.573 CoefTot : -0.997 ChDiff : 9 ZoneTo : 44 KR : 6 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.294 1.388 0.213 0.503 MesoH : -1.012 0.145 -0.537 0.108 MuHd_075 : 29.370 19.423 9.529 6.572 MuHd_095 : 26.911 23.079 7.179 6.093 MuHd_100 : 20.414 24.813 6.104 6.924 MuHd_105 : 24.864 22.426 5.986 7.031 Hmax_075 : 9.333 17.500 -0.098 6.670 Hmax_095 : 7.788 21.613 0.863 6.820 Hmax_100 : 2.200 25.800 -1.463 7.900 Hmax_105 : 16.700 24.800 -0.454 6.040 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.3627 0.6373 DFMC : 0.5857 0.4143
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 337 EHI_131090 MSQSVKPKSLNLKKAYPLFGIKNFRSTCFANSVFQVLCSLPPFVEYLKKVNPTDDMKYTKAIKDMFNLFLQCNKVGIQKE 80 IIHPPQSMKEIIMKLQTESGQHQMDATEFYTTLINCLHTECKNKISEGEEAQQDDDEGWEEVGKKFKKVQLRSEKTDGTS 160 VISDYFRGSMRSLTITIDEMKKKHNQAVLQEFYVLSLPIQSKQNCVSSVSQAINLAFSKRKIDNTHFQQLFIEEAPKVLV 240 LQLNRFIYDRVKLDVVKLVDHINYTESLQLKTNKGNVNYRLISIIEHRGNQIRRGHYVSYVRRGEKWYFCNDENIQLIDQ 320 KDIYDKMAYVLIYSSLN 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................. 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_131090 6 -MSQSVK|PK 0.071 . EHI_131090 8 SQSVKPK|SL 0.119 . EHI_131090 13 PKSLNLK|KA 0.077 . EHI_131090 14 KSLNLKK|AY 0.076 . EHI_131090 22 YPLFGIK|NF 0.052 . EHI_131090 25 FGIKNFR|ST 0.134 . EHI_131090 48 PFVEYLK|KV 0.064 . EHI_131090 49 FVEYLKK|VN 0.076 . EHI_131090 57 NPTDDMK|YT 0.076 . EHI_131090 60 DDMKYTK|AI 0.078 . EHI_131090 63 KYTKAIK|DM 0.062 . EHI_131090 74 LFLQCNK|VG 0.059 . EHI_131090 79 NKVGIQK|EI 0.062 . EHI_131090 89 HPPQSMK|EI 0.083 . EHI_131090 94 MKEIIMK|LQ 0.071 . EHI_131090 122 CLHTECK|NK 0.066 . EHI_131090 124 HTECKNK|IS 0.085 . EHI_131090 144 GWEEVGK|KF 0.064 . EHI_131090 145 WEEVGKK|FK 0.132 . EHI_131090 147 EVGKKFK|KV 0.065 . EHI_131090 148 VGKKFKK|VQ 0.099 . EHI_131090 152 FKKVQLR|SE 0.139 . EHI_131090 155 VQLRSEK|TD 0.121 . EHI_131090 167 VISDYFR|GS 0.126 . EHI_131090 171 YFRGSMR|SL 0.154 . EHI_131090 181 ITIDEMK|KK 0.061 . EHI_131090 182 TIDEMKK|KH 0.092 . EHI_131090 183 IDEMKKK|HN 0.156 . EHI_131090 202 SLPIQSK|QN 0.065 . EHI_131090 219 INLAFSK|RK 0.060 . EHI_131090 220 NLAFSKR|KI 0.276 . EHI_131090 221 LAFSKRK|ID 0.099 . EHI_131090 237 FIEEAPK|VL 0.058 . EHI_131090 245 LVLQLNR|FI 0.078 . EHI_131090 250 NRFIYDR|VK 0.085 . EHI_131090 252 FIYDRVK|LD 0.058 . EHI_131090 257 VKLDVVK|LV 0.078 . EHI_131090 271 TESLQLK|TN 0.067 . EHI_131090 274 LQLKTNK|GN 0.064 . EHI_131090 280 KGNVNYR|LI 0.165 . EHI_131090 288 ISIIEHR|GN 0.100 . EHI_131090 293 HRGNQIR|RG 0.091 . EHI_131090 294 RGNQIRR|GH 0.151 . EHI_131090 302 HYVSYVR|RG 0.068 . EHI_131090 303 YVSYVRR|GE 0.165 . EHI_131090 306 YVRRGEK|WY 0.107 . EHI_131090 321 IQLIDQK|DI 0.082 . EHI_131090 326 QKDIYDK|MA 0.068 . ____________________________^_________________

  • Fasta :-

    >EHI_131090 ATGTCACAATCTGTAAAACCTAAATCGTTGAATTTAAAGAAAGCATACCCATTGTTTGGC ATTAAAAATTTTAGGTCAACATGTTTTGCTAATAGTGTATTCCAGGTATTATGTTCTTTA CCACCTTTTGTTGAATATTTAAAAAAAGTAAATCCTACAGATGATATGAAATATACAAAA GCAATAAAAGATATGTTTAACTTATTTCTTCAATGTAATAAAGTTGGAATTCAAAAAGAA ATTATTCATCCACCTCAATCAATGAAGGAGATTATTATGAAATTACAAACAGAAAGTGGT CAACATCAAATGGATGCAACAGAATTTTATACTACTTTAATTAACTGTTTACATACTGAA TGTAAAAATAAAATATCTGAAGGAGAAGAAGCACAACAAGATGATGATGAGGGATGGGAA GAAGTTGGAAAAAAATTCAAAAAAGTTCAATTAAGAAGTGAAAAAACTGATGGAACAAGT GTAATTTCTGATTATTTTAGAGGAAGTATGAGGTCATTGACTATAACTATTGATGAAATG AAAAAAAAACACAACCAAGCTGTTTTACAAGAGTTTTATGTTTTATCATTACCCATTCAG TCTAAACAAAATTGCGTTAGTTCTGTTAGTCAAGCTATTAATTTAGCTTTCTCAAAAAGA AAAATTGATAACACACATTTTCAACAATTGTTTATTGAAGAAGCACCAAAAGTATTAGTA TTACAATTAAACCGTTTTATTTATGATCGTGTGAAATTAGATGTTGTTAAATTAGTTGAT CATATTAATTATACTGAATCTCTTCAATTAAAAACAAATAAAGGAAATGTAAATTATAGA CTTATAAGTATTATTGAACATCGTGGGAATCAAATAAGAAGAGGACATTATGTAAGTTAT GTTAGAAGAGGGGAGAAATGGTATTTTTGTAATGATGAAAATATTCAACTCATTGACCAA AAAGATATTTATGATAAGATGGCATATGTTTTAATTTATTCTTCTTTAAATTAA
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  • Fasta :-

    MSQSVKPKSLNLKKAYPLFGIKNFRSTCFANSVFQVLCSLPPFVEYLKKVNPTDDMKYTK AIKDMFNLFLQCNKVGIQKEIIHPPQSMKEIIMKLQTESGQHQMDATEFYTTLINCLHTE CKNKISEGEEAQQDDDEGWEEVGKKFKKVQLRSEKTDGTSVISDYFRGSMRSLTITIDEM KKKHNQAVLQEFYVLSLPIQSKQNCVSSVSQAINLAFSKRKIDNTHFQQLFIEEAPKVLV LQLNRFIYDRVKLDVVKLVDHINYTESLQLKTNKGNVNYRLISIIEHRGNQIRRGHYVSY VRRGEKWYFCNDENIQLIDQKDIYDKMAYVLIYSSLN

  • title: Active Site
  • coordinates: N23,C28,H296,D312
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
EHI_131090218 SNLAFSKRKI0.992unspEHI_131090218 SNLAFSKRKI0.992unspEHI_131090218 SNLAFSKRKI0.992unspEHI_131090283 SYRLISIIEH0.992unspEHI_13109087 SHPPQSMKEI0.997unspEHI_131090169 SYFRGSMRSL0.992unsp

EHI_131090      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India