EHI_133210 | hypothetical protein

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  • Fasta :-

    >EHI_133210 MGPFAGLISVFLVDLALTNQSYKVQFKRAVFTSLIGLLVIVFAQLFPLQDFTCLLGSVIV GLVLGVLYFVNLNPWFSQQPLLLQTIVYVSLVTFLLTYFIVFCLLLFIWIQPLQITISAQ TN
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_133210.fa Sequence name : EHI_133210 Sequence length : 122 VALUES OF COMPUTED PARAMETERS Coef20 : 3.947 CoefTot : -1.218 ChDiff : 1 ZoneTo : 119 KR : 3 DE : 2 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.653 2.794 0.558 0.995 MesoH : 1.513 1.752 0.191 0.668 MuHd_075 : 38.562 25.152 9.059 8.493 MuHd_095 : 21.387 21.275 5.905 6.031 MuHd_100 : 16.603 19.188 4.563 4.714 MuHd_105 : 17.912 18.992 4.672 5.205 Hmax_075 : 14.300 22.100 1.960 7.910 Hmax_095 : 21.500 28.613 -0.319 8.200 Hmax_100 : 19.000 27.500 1.106 8.300 Hmax_105 : 2.188 21.700 3.478 6.178 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8440 0.1560 DFMC : 0.5640 0.4360
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 122 EHI_133210 MGPFAGLISVFLVDLALTNQSYKVQFKRAVFTSLIGLLVIVFAQLFPLQDFTCLLGSVIVGLVLGVLYFVNLNPWFSQQP 80 LLLQTIVYVSLVTFLLTYFIVFCLLLFIWIQPLQITISAQTN 160 ................................................................................ 80 .......................................... 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_133210 23 LTNQSYK|VQ 0.060 . EHI_133210 27 SYKVQFK|RA 0.059 . EHI_133210 28 YKVQFKR|AV 0.446 . ____________________________^_________________

  • Fasta :-

    >EHI_133210 ATGGGACCATTTGCTGGATTAATATCAGTATTTCTTGTTGACTTAGCGTTAACAAACCAA AGTTATAAAGTACAATTTAAAAGAGCAGTTTTTACATCATTAATAGGTCTTTTAGTAATA GTATTTGCACAATTATTTCCATTACAAGATTTTACATGTTTATTAGGAAGTGTTATTGTT GGGTTAGTTCTTGGAGTGTTATATTTTGTTAATTTAAATCCATGGTTTTCTCAACAACCA TTATTACTACAGACAATTGTTTATGTTTCATTGGTGACATTTCTTTTAACATATTTTATT GTTTTTTGTTTATTATTATTCATATGGATTCAACCTTTACAAATTACTATATCAGCTCAA ACAAATTGA
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  • Fasta :-

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EHI_133210      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India