EHI_140220 | cysteine protease, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008234      

  • Computed_GO_Functions:  cysteine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EHI_140220SP0.0269600.9729020.000138CS pos: 21-22. VIP-KL. Pr: 0.4052
No Results

  • Fasta :-

    >EHI_140220 MSHLIIIVSLVICSFSLKVIPKLEYLKGNENKLWEEWKIKYGKTYNNINEIHRKLIFMKN LMEIKTLNQKREKDVDAYFDLNQWSDLSNQEFEDLMLMKKPKRSNAKELHDTINITIPYP KGPVPINYSACNQKTLFGKLNPGEIDFCNGIEFDQQSCGSCYCVSNALALQLKWANLTYL RDGKPQYKMFSPQQLLDCEVGGYRCAGGYADSVLDFSHYVSTIDDYPYYSGREPSKRMAC VKGKRTPIKLSYTIFDSAEDINIIKPIIHHYGGFVSCVYPKYWTAYRGGILRGLKCEKGV VTTHVVGIVGYGIEDGIEYVVVRNSWGKNWGLGGYIKLGADSLCGIGGNDGGDVPVSVVL HVDFSDVEYGPYGEFRNNTDVPQRLYNESAEANESSSNIESSNDSSNESQSLNSRQSEES LVVEDSSSVEPNIRPNNENHLRSITIYVLYVLVGISIITMVVAVIILHRSIIFN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_140220.fa Sequence name : EHI_140220 Sequence length : 474 VALUES OF COMPUTED PARAMETERS Coef20 : 4.875 CoefTot : 0.218 ChDiff : -6 ZoneTo : 23 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.465 3.112 0.592 0.954 MesoH : -0.450 0.405 -0.280 0.316 MuHd_075 : 23.106 15.863 5.584 6.506 MuHd_095 : 20.434 14.265 7.679 4.188 MuHd_100 : 19.356 11.436 7.816 3.442 MuHd_105 : 20.593 14.362 8.213 4.193 Hmax_075 : 16.450 19.800 4.035 6.640 Hmax_095 : 18.800 24.238 5.202 7.455 Hmax_100 : 16.300 20.500 5.452 6.040 Hmax_105 : 17.500 22.800 5.846 6.510 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9434 0.0566 DFMC : 0.9697 0.0303
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 474 EHI_140220 MSHLIIIVSLVICSFSLKVIPKLEYLKGNENKLWEEWKIKYGKTYNNINEIHRKLIFMKNLMEIKTLNQKREKDVDAYFD 80 LNQWSDLSNQEFEDLMLMKKPKRSNAKELHDTINITIPYPKGPVPINYSACNQKTLFGKLNPGEIDFCNGIEFDQQSCGS 160 CYCVSNALALQLKWANLTYLRDGKPQYKMFSPQQLLDCEVGGYRCAGGYADSVLDFSHYVSTIDDYPYYSGREPSKRMAC 240 VKGKRTPIKLSYTIFDSAEDINIIKPIIHHYGGFVSCVYPKYWTAYRGGILRGLKCEKGVVTTHVVGIVGYGIEDGIEYV 320 VVRNSWGKNWGLGGYIKLGADSLCGIGGNDGGDVPVSVVLHVDFSDVEYGPYGEFRNNTDVPQRLYNESAEANESSSNIE 400 SSNDSSNESQSLNSRQSEESLVVEDSSSVEPNIRPNNENHLRSITIYVLYVLVGISIITMVVAVIILHRSIIFN 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 .......................................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_140220 18 ICSFSLK|VI 0.067 . EHI_140220 22 SLKVIPK|LE 0.063 . EHI_140220 27 PKLEYLK|GN 0.065 . EHI_140220 32 LKGNENK|LW 0.070 . EHI_140220 38 KLWEEWK|IK 0.064 . EHI_140220 40 WEEWKIK|YG 0.066 . EHI_140220 43 WKIKYGK|TY 0.069 . EHI_140220 53 NINEIHR|KL 0.081 . EHI_140220 54 INEIHRK|LI 0.103 . EHI_140220 59 RKLIFMK|NL 0.071 . EHI_140220 65 KNLMEIK|TL 0.062 . EHI_140220 70 IKTLNQK|RE 0.054 . EHI_140220 71 KTLNQKR|EK 0.140 . EHI_140220 73 LNQKREK|DV 0.132 . EHI_140220 99 EDLMLMK|KP 0.057 . EHI_140220 100 DLMLMKK|PK 0.079 . EHI_140220 102 MLMKKPK|RS 0.087 . EHI_140220 103 LMKKPKR|SN 0.381 . EHI_140220 107 PKRSNAK|EL 0.084 . EHI_140220 121 ITIPYPK|GP 0.063 . EHI_140220 134 YSACNQK|TL 0.073 . EHI_140220 139 QKTLFGK|LN 0.065 . EHI_140220 173 ALALQLK|WA 0.060 . EHI_140220 181 ANLTYLR|DG 0.091 . EHI_140220 184 TYLRDGK|PQ 0.101 . EHI_140220 188 DGKPQYK|MF 0.072 . EHI_140220 204 CEVGGYR|CA 0.106 . EHI_140220 232 YPYYSGR|EP 0.101 . EHI_140220 236 SGREPSK|RM 0.060 . EHI_140220 237 GREPSKR|MA 0.406 . EHI_140220 242 KRMACVK|GK 0.078 . EHI_140220 244 MACVKGK|RT 0.073 . EHI_140220 245 ACVKGKR|TP 0.114 . EHI_140220 249 GKRTPIK|LS 0.106 . EHI_140220 265 EDINIIK|PI 0.067 . EHI_140220 281 VSCVYPK|YW 0.084 . EHI_140220 287 KYWTAYR|GG 0.069 . EHI_140220 292 YRGGILR|GL 0.094 . EHI_140220 295 GILRGLK|CE 0.103 . EHI_140220 298 RGLKCEK|GV 0.069 . EHI_140220 323 IEYVVVR|NS 0.099 . EHI_140220 328 VRNSWGK|NW 0.087 . EHI_140220 337 GLGGYIK|LG 0.065 . EHI_140220 376 GPYGEFR|NN 0.136 . EHI_140220 384 NTDVPQR|LY 0.076 . EHI_140220 415 SQSLNSR|QS 0.118 . EHI_140220 434 SVEPNIR|PN 0.075 . EHI_140220 442 NNENHLR|SI 0.146 . EHI_140220 469 AVIILHR|SI 0.114 . ____________________________^_________________

  • Fasta :-

    >EHI_140220 ATGAGCCATTTGATTATTATTGTTTCATTGGTTATATGTTCTTTTTCACTCAAAGTAATT CCAAAATTAGAATATTTAAAAGGAAATGAGAATAAACTTTGGGAAGAATGGAAAATAAAA TATGGAAAGACATATAATAATATTAATGAAATTCATAGAAAATTAATTTTTATGAAAAAT TTAATGGAAATTAAAACGTTAAATCAAAAAAGAGAAAAAGATGTTGATGCTTATTTTGAT TTAAATCAATGGAGTGATTTATCTAATCAAGAGTTTGAAGATTTAATGTTAATGAAAAAG CCTAAAAGAAGTAATGCTAAAGAATTACATGATACAATTAATATTACTATTCCATATCCA AAAGGTCCTGTTCCTATTAACTATTCTGCTTGTAACCAAAAAACACTTTTTGGAAAGTTA AATCCTGGAGAAATTGATTTTTGCAATGGGATTGAGTTTGATCAACAATCTTGTGGGTCA TGTTATTGTGTAAGTAATGCTCTTGCTCTTCAATTAAAATGGGCTAATCTCACTTATTTA AGAGATGGAAAGCCTCAATACAAAATGTTTAGTCCTCAACAACTTCTTGACTGTGAAGTC GGAGGATATCGTTGTGCTGGAGGATATGCTGATAGTGTATTAGACTTTTCGCATTATGTT TCTACAATAGATGATTATCCTTATTATTCAGGTAGAGAACCATCAAAAAGAATGGCTTGT GTTAAAGGAAAAAGAACACCAATTAAACTCAGTTATACTATTTTCGATTCTGCAGAAGAC ATTAATATTATTAAACCAATTATTCATCATTATGGTGGATTTGTTTCATGTGTTTATCCT AAATACTGGACTGCATATCGTGGAGGTATATTAAGGGGTCTTAAATGTGAAAAAGGAGTT GTCACAACTCACGTTGTTGGAATTGTTGGATATGGTATTGAAGATGGTATTGAGTATGTT GTTGTTCGAAATTCATGGGGTAAAAATTGGGGTCTTGGAGGCTATATTAAACTTGGAGCA GATTCTTTATGTGGTATTGGTGGGAATGATGGAGGAGATGTTCCTGTTTCAGTAGTTCTT CATGTAGATTTCTCTGACGTAGAGTATGGACCATACGGTGAGTTTAGAAATAATACTGAT GTCCCTCAACGTCTATACAATGAGTCTGCAGAAGCAAATGAGTCTTCAAGTAATATTGAA AGTAGTAATGATTCATCCAATGAAAGTCAAAGCTTAAATAGCCGTCAGTCTGAAGAGAGT TTAGTAGTAGAAGACTCTTCATCTGTGGAGCCAAACATACGACCTAACAATGAAAATCAT TTAAGGTCTATTACAATCTATGTTTTATATGTACTTGTTGGAATTAGTATTATTACTATG GTAGTTGCTGTCATAATTCTTCATCGCTCAATAATTTTTAATTGA
  • Download Fasta

  • Fasta :-

    MSHLIIIVSLVICSFSLKVIPKLEYLKGNENKLWEEWKIKYGKTYNNINEIHRKLIFMKN LMEIKTLNQKREKDVDAYFDLNQWSDLSNQEFEDLMLMKKPKRSNAKELHDTINITIPYP KGPVPINYSACNQKTLFGKLNPGEIDFCNGIEFDQQSCGSCYCVSNALALQLKWANLTYL RDGKPQYKMFSPQQLLDCEVGGYRCAGGYADSVLDFSHYVSTIDDYPYYSGREPSKRMAC VKGKRTPIKLSYTIFDSAEDINIIKPIIHHYGGFVSCVYPKYWTAYRGGILRGLKCEKGV VTTHVVGIVGYGIEDGIEYVVVRNSWGKNWGLGGYIKLGADSLCGIGGNDGGDVPVSVVL HVDFSDVEYGPYGEFRNNTDVPQRLYNESAEANESSSNIESSNDSSNESQSLNSRQSEES LVVEDSSSVEPNIRPNNENHLRSITIYVLYVLVGISIITMVVAVIILHRSIIFN

  • title: active site
  • coordinates: Q155,C161,H304,N324
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
EHI_140220235 SGREPSKRMA0.992unspEHI_140220235 SGREPSKRMA0.992unspEHI_140220235 SGREPSKRMA0.992unspEHI_140220397 SNESSSNIES0.99unspEHI_140220417 SNSRQSEESL0.996unspEHI_140220221 SSHYVSTIDD0.994unspEHI_140220230 SYPYYSGREP0.993unsp

EHI_140220      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India