EHI_140630 | hypothetical protein, conserved

_IDPredictionOTHERSPmTPCS_Position
EHI_140630OTHER0.9643570.0000330.035610
No Results

  • Fasta :-

    >EHI_140630 MFQQHLKLLRNEMKKRKITHYYHEISDPHMTEFTHSFYHRLEWLCGFSGFTGEIVITQKQ ACLWTDSIYFLQAKKEIAQGWEVYDIDNIETISPCLMIKQSKKISLGLNPEITNYMSLEE LFDIELDIIPIDIFNIINPLPFILSPIHLFNECSTPVIQKIESIRKKYHNSTIILTDLAD VNWAFNIRAHDIPFSPIAYGYGVITPTQVHLFVGNKNQAQELEVQYPFNELKIKIHSYHS FFGSIKHLIKTPIVVYNKENVNMKLQDIIDSISNLKRKESLRFIQELRSIRSSKEIEMIK QIHINDSVILCYFFSKLNQLKGTDITEWDASVLLEKLRKELGEKYDEPSFLSIIATGKNG AMMHYEPTEQKNELINWDKTLLCDVGAQYKSGCTTDVTRTLHFGTPTQKERLCYTRVLQG HIDAQMTKILQDESIDKIDTVSRKLILNENEEWDFKHDIGHGVGHYSFVHEYPPMYGVGL KVKEGMTTSIEPGIYLEKEFGIRIENVIVFENTQNSSFKLTPLTLVPYCSCLIDYDLLTI EEKNWLKEYYQNIRTIIIPRIKDSYVIQWVESNLILE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_140630.fa Sequence name : EHI_140630 Sequence length : 577 VALUES OF COMPUTED PARAMETERS Coef20 : 3.852 CoefTot : -0.295 ChDiff : -13 ZoneTo : 11 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.135 1.729 0.208 0.724 MesoH : -0.422 0.506 -0.341 0.310 MuHd_075 : 20.727 10.937 5.229 4.698 MuHd_095 : 21.522 14.989 5.402 4.492 MuHd_100 : 20.696 13.083 5.771 4.625 MuHd_105 : 24.599 15.729 6.967 6.538 Hmax_075 : -0.933 7.700 -2.866 2.205 Hmax_095 : -7.000 3.938 -5.216 0.245 Hmax_100 : -10.200 1.100 -5.571 0.400 Hmax_105 : -4.317 5.017 -3.213 1.400 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.6474 0.3526 DFMC : 0.8283 0.1717
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 577 EHI_140630 MFQQHLKLLRNEMKKRKITHYYHEISDPHMTEFTHSFYHRLEWLCGFSGFTGEIVITQKQACLWTDSIYFLQAKKEIAQG 80 WEVYDIDNIETISPCLMIKQSKKISLGLNPEITNYMSLEELFDIELDIIPIDIFNIINPLPFILSPIHLFNECSTPVIQK 160 IESIRKKYHNSTIILTDLADVNWAFNIRAHDIPFSPIAYGYGVITPTQVHLFVGNKNQAQELEVQYPFNELKIKIHSYHS 240 FFGSIKHLIKTPIVVYNKENVNMKLQDIIDSISNLKRKESLRFIQELRSIRSSKEIEMIKQIHINDSVILCYFFSKLNQL 320 KGTDITEWDASVLLEKLRKELGEKYDEPSFLSIIATGKNGAMMHYEPTEQKNELINWDKTLLCDVGAQYKSGCTTDVTRT 400 LHFGTPTQKERLCYTRVLQGHIDAQMTKILQDESIDKIDTVSRKLILNENEEWDFKHDIGHGVGHYSFVHEYPPMYGVGL 480 KVKEGMTTSIEPGIYLEKEFGIRIENVIVFENTQNSSFKLTPLTLVPYCSCLIDYDLLTIEEKNWLKEYYQNIRTIIIPR 560 IKDSYVIQWVESNLILE 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................. 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_140630 7 MFQQHLK|LL 0.062 . EHI_140630 10 QHLKLLR|NE 0.079 . EHI_140630 14 LLRNEMK|KR 0.060 . EHI_140630 15 LRNEMKK|RK 0.115 . EHI_140630 16 RNEMKKR|KI 0.274 . EHI_140630 17 NEMKKRK|IT 0.106 . EHI_140630 40 THSFYHR|LE 0.116 . EHI_140630 59 EIVITQK|QA 0.065 . EHI_140630 74 IYFLQAK|KE 0.067 . EHI_140630 75 YFLQAKK|EI 0.087 . EHI_140630 99 SPCLMIK|QS 0.065 . EHI_140630 102 LMIKQSK|KI 0.077 . EHI_140630 103 MIKQSKK|IS 0.093 . EHI_140630 160 STPVIQK|IE 0.059 . EHI_140630 165 QKIESIR|KK 0.086 . EHI_140630 166 KIESIRK|KY 0.075 . EHI_140630 167 IESIRKK|YH 0.117 . EHI_140630 188 NWAFNIR|AH 0.084 . EHI_140630 216 HLFVGNK|NQ 0.061 . EHI_140630 232 YPFNELK|IK 0.068 . EHI_140630 234 FNELKIK|IH 0.064 . EHI_140630 246 SFFGSIK|HL 0.065 . EHI_140630 250 SIKHLIK|TP 0.061 . EHI_140630 258 PIVVYNK|EN 0.055 . EHI_140630 264 KENVNMK|LQ 0.070 . EHI_140630 276 DSISNLK|RK 0.055 . EHI_140630 277 SISNLKR|KE 0.196 . EHI_140630 278 ISNLKRK|ES 0.089 . EHI_140630 282 KRKESLR|FI 0.132 . EHI_140630 288 RFIQELR|SI 0.117 . EHI_140630 291 QELRSIR|SS 0.417 . EHI_140630 294 RSIRSSK|EI 0.228 . EHI_140630 300 KEIEMIK|QI 0.066 . EHI_140630 316 LCYFFSK|LN 0.064 . EHI_140630 321 SKLNQLK|GT 0.081 . EHI_140630 336 ASVLLEK|LR 0.055 . EHI_140630 338 VLLEKLR|KE 0.070 . EHI_140630 339 LLEKLRK|EL 0.102 . EHI_140630 344 RKELGEK|YD 0.069 . EHI_140630 358 SIIATGK|NG 0.057 . EHI_140630 371 YEPTEQK|NE 0.052 . EHI_140630 379 ELINWDK|TL 0.059 . EHI_140630 390 DVGAQYK|SG 0.073 . EHI_140630 399 CTTDVTR|TL 0.094 . EHI_140630 409 FGTPTQK|ER 0.052 . EHI_140630 411 TPTQKER|LC 0.093 . EHI_140630 416 ERLCYTR|VL 0.095 . EHI_140630 428 IDAQMTK|IL 0.067 . EHI_140630 437 QDESIDK|ID 0.059 . EHI_140630 443 KIDTVSR|KL 0.085 . EHI_140630 444 IDTVSRK|LI 0.078 . EHI_140630 456 NEEWDFK|HD 0.063 . EHI_140630 481 MYGVGLK|VK 0.064 . EHI_140630 483 GVGLKVK|EG 0.058 . EHI_140630 498 PGIYLEK|EF 0.063 . EHI_140630 503 EKEFGIR|IE 0.076 . EHI_140630 519 TQNSSFK|LT 0.069 . EHI_140630 543 LLTIEEK|NW 0.057 . EHI_140630 547 EEKNWLK|EY 0.065 . EHI_140630 554 EYYQNIR|TI 0.070 . EHI_140630 560 RTIIIPR|IK 0.090 . EHI_140630 562 IIIPRIK|DS 0.073 . ____________________________^_________________

  • Fasta :-

    >EHI_140630 ATGTTTCAACAACATTTAAAACTCTTAAGAAATGAAATGAAAAAACGTAAAATTACTCAT TATTATCATGAAATATCTGATCCTCATATGACAGAATTTACTCATTCATTTTATCATCGA TTAGAGTGGTTATGTGGATTTAGTGGATTTACAGGTGAAATTGTTATAACTCAAAAACAA GCATGTTTATGGACTGATAGTATTTATTTTTTACAAGCAAAAAAAGAAATTGCACAAGGA TGGGAAGTATATGATATTGATAATATAGAAACTATTTCTCCATGTTTAATGATTAAACAA AGTAAAAAGATTTCTCTAGGACTCAATCCTGAAATTACAAATTACATGTCATTAGAAGAA CTTTTTGATATTGAATTGGATATTATCCCAATTGATATTTTTAATATTATTAATCCTTTA CCATTTATTTTATCTCCAATTCATCTTTTTAATGAATGTTCAACACCAGTAATTCAAAAA ATAGAAAGTATTAGAAAGAAATATCATAATAGTACTATTATATTAACTGATCTTGCTGAT GTTAATTGGGCTTTCAATATTAGAGCACATGATATTCCTTTTTCACCAATAGCATATGGG TATGGAGTTATTACTCCAACCCAAGTTCATCTGTTTGTGGGAAATAAAAACCAAGCACAA GAATTAGAAGTACAATATCCATTTAATGAATTAAAGATTAAAATTCACTCTTATCATTCA TTCTTTGGATCTATTAAACATTTAATAAAAACTCCCATTGTTGTTTATAATAAAGAAAAT GTTAATATGAAATTACAAGATATTATTGACTCGATTTCAAATTTGAAAAGAAAAGAATCA CTAAGATTTATTCAAGAATTAAGATCAATAAGAAGTTCAAAAGAAATTGAGATGATAAAA CAAATTCATATCAATGATAGTGTTATTCTTTGTTATTTCTTTAGTAAATTAAATCAATTA AAAGGGACTGATATTACAGAATGGGATGCAAGTGTATTATTAGAAAAATTAAGAAAAGAA CTTGGAGAAAAATATGATGAACCAAGTTTCCTTTCTATCATTGCTACTGGAAAGAATGGA GCAATGATGCATTATGAACCAACAGAACAAAAAAATGAATTAATTAATTGGGATAAAACA TTGTTATGTGATGTTGGAGCACAATATAAAAGTGGATGCACAACTGATGTTACAAGAACT CTTCATTTTGGAACACCGACACAAAAAGAAAGACTGTGTTATACCAGAGTACTTCAAGGA CATATAGATGCACAGATGACAAAAATTCTTCAGGACGAAAGTATTGATAAAATTGATACA GTTTCAAGAAAACTCATTTTAAATGAAAATGAAGAATGGGACTTTAAACATGACATTGGT CATGGAGTTGGTCATTATTCTTTTGTTCATGAATACCCACCAATGTATGGAGTTGGTTTA AAAGTAAAAGAAGGGATGACAACAAGTATTGAACCAGGTATTTATCTTGAGAAAGAATTT GGAATTAGAATAGAAAATGTTATTGTTTTTGAAAATACACAAAACTCATCTTTTAAGTTA ACACCATTAACATTGGTTCCATATTGTTCTTGTTTAATTGATTATGATCTACTAACAATT GAAGAGAAAAATTGGTTGAAAGAATATTATCAAAATATTAGAACCATTATTATTCCACGT ATAAAAGATAGTTATGTAATTCAGTGGGTTGAATCTAATTTAATACTTGAATAA
  • Download Fasta

  • Fasta :-

    MFQQHLKLLRNEMKKRKITHYYHEISDPHMTEFTHSFYHRLEWLCGFSGFTGEIVITQKQ ACLWTDSIYFLQAKKEIAQGWEVYDIDNIETISPCLMIKQSKKISLGLNPEITNYMSLEE LFDIELDIIPIDIFNIINPLPFILSPIHLFNECSTPVIQKIESIRKKYHNSTIILTDLAD VNWAFNIRAHDIPFSPIAYGYGVITPTQVHLFVGNKNQAQELEVQYPFNELKIKIHSYHS FFGSIKHLIKTPIVVYNKENVNMKLQDIIDSISNLKRKESLRFIQELRSIRSSKEIEMIK QIHINDSVILCYFFSKLNQLKGTDITEWDASVLLEKLRKELGEKYDEPSFLSIIATGKNG AMMHYEPTEQKNELINWDKTLLCDVGAQYKSGCTTDVTRTLHFGTPTQKERLCYTRVLQG HIDAQMTKILQDESIDKIDTVSRKLILNENEEWDFKHDIGHGVGHYSFVHEYPPMYGVGL KVKEGMTTSIEPGIYLEKEFGIRIENVIVFENTQNSSFKLTPLTLVPYCSCLIDYDLLTI EEKNWLKEYYQNIRTIIIPRIKDSYVIQWVESNLILE

  • title: active site
  • coordinates: H364,D384,D396,H465,E491,E505
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
EHI_140630292 SRSIRSSKEI0.994unspEHI_140630292 SRSIRSSKEI0.994unspEHI_140630292 SRSIRSSKEI0.994unspEHI_140630293 SSIRSSKEIE0.995unspEHI_140630117 STNYMSLEEL0.994unspEHI_140630289 SQELRSIRSS0.992unsp

EHI_140630      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India