EHI_146330 | calpain large subunit domain III containing protein

_IDPredictionOTHERSPmTPCS_Position
EHI_146330OTHER0.9999670.0000250.000008
No Results

  • Fasta :-

    >EHI_146330 MSKTPRERAGREPKMGKVGMLTIQFEDCKDGALGYIVCDVDHLTYITTKKKASKTLKIDE TLYFPINSARPNIHFFLYKPRLIGSKCVGFYQLNMADIKESDQELHYVQSIKKPKNILEP DIGEVRQPEETGTGNDKKKKKKEKVLPQFKVSMKFTPVPVEEKKLDGIVLEGEWKKGFDA GNIISNPKWYENPQFLLTLTGKLHIKVCLKQDNINNRVTFFIVKYDQVFYENRPLTLFDP NEVIKIDENFLNTMASDNIEHSFELDAGSYVIIPTNLNRISSINPEPYHGKFQIAVSTEH MEAIEFIPIDYNKEWKFFEDSKKWTQTSNGGADRGSPYEFYHNYQYVIETKKDTKMSITM EQPDNKNKIGFYLFETKQTDRKEIDFGELVEETTNLISNVCVGKNFKLREGKYILVPCTS EAGEVGEFKLKIYYEEENVIIKELTKEWSNIVSVNGEWKEGTAGGSVDDPESFVTNPQYV IKAKYNKEECKDIIILLSQFIGASGKIESIGLPVFVNLEQKLDADDINEDNLVNLPEAWV RNRNVFTCFEVDEEDGLEVIVIPSTMKPNTFANFKITILTDVKDVTIEALE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_146330.fa Sequence name : EHI_146330 Sequence length : 591 VALUES OF COMPUTED PARAMETERS Coef20 : 3.514 CoefTot : -0.119 ChDiff : -17 ZoneTo : 6 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.782 1.253 0.027 0.558 MesoH : -1.049 0.190 -0.506 0.175 MuHd_075 : 37.276 15.702 9.445 6.049 MuHd_095 : 23.000 5.026 5.582 4.014 MuHd_100 : 26.132 9.758 7.056 4.481 MuHd_105 : 22.980 11.502 6.776 4.051 Hmax_075 : 0.467 -0.350 -2.779 1.167 Hmax_095 : -9.450 -6.900 -4.911 -0.385 Hmax_100 : -2.000 -4.200 -2.900 1.060 Hmax_105 : -2.100 -3.033 -2.857 1.097 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8694 0.1306 DFMC : 0.7718 0.2282
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 591 EHI_146330 MSKTPRERAGREPKMGKVGMLTIQFEDCKDGALGYIVCDVDHLTYITTKKKASKTLKIDETLYFPINSARPNIHFFLYKP 80 RLIGSKCVGFYQLNMADIKESDQELHYVQSIKKPKNILEPDIGEVRQPEETGTGNDKKKKKKEKVLPQFKVSMKFTPVPV 160 EEKKLDGIVLEGEWKKGFDAGNIISNPKWYENPQFLLTLTGKLHIKVCLKQDNINNRVTFFIVKYDQVFYENRPLTLFDP 240 NEVIKIDENFLNTMASDNIEHSFELDAGSYVIIPTNLNRISSINPEPYHGKFQIAVSTEHMEAIEFIPIDYNKEWKFFED 320 SKKWTQTSNGGADRGSPYEFYHNYQYVIETKKDTKMSITMEQPDNKNKIGFYLFETKQTDRKEIDFGELVEETTNLISNV 400 CVGKNFKLREGKYILVPCTSEAGEVGEFKLKIYYEEENVIIKELTKEWSNIVSVNGEWKEGTAGGSVDDPESFVTNPQYV 480 IKAKYNKEECKDIIILLSQFIGASGKIESIGLPVFVNLEQKLDADDINEDNLVNLPEAWVRNRNVFTCFEVDEEDGLEVI 560 VIPSTMKPNTFANFKITILTDVKDVTIEALE 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ............................... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_146330 3 ----MSK|TP 0.056 . EHI_146330 6 -MSKTPR|ER 0.104 . EHI_146330 8 SKTPRER|AG 0.081 . EHI_146330 11 PRERAGR|EP 0.245 . EHI_146330 14 RAGREPK|MG 0.167 . EHI_146330 17 REPKMGK|VG 0.055 . EHI_146330 29 IQFEDCK|DG 0.061 . EHI_146330 49 LTYITTK|KK 0.058 . EHI_146330 50 TYITTKK|KA 0.140 . EHI_146330 51 YITTKKK|AS 0.086 . EHI_146330 54 TKKKASK|TL 0.072 . EHI_146330 57 KASKTLK|ID 0.073 . EHI_146330 70 FPINSAR|PN 0.101 . EHI_146330 79 IHFFLYK|PR 0.062 . EHI_146330 81 FFLYKPR|LI 0.109 . EHI_146330 86 PRLIGSK|CV 0.083 . EHI_146330 99 LNMADIK|ES 0.079 . EHI_146330 112 HYVQSIK|KP 0.060 . EHI_146330 113 YVQSIKK|PK 0.095 . EHI_146330 115 QSIKKPK|NI 0.068 . EHI_146330 126 PDIGEVR|QP 0.080 . EHI_146330 137 TGTGNDK|KK 0.064 . EHI_146330 138 GTGNDKK|KK 0.098 . EHI_146330 139 TGNDKKK|KK 0.124 . EHI_146330 140 GNDKKKK|KK 0.216 . EHI_146330 141 NDKKKKK|KE 0.096 . EHI_146330 142 DKKKKKK|EK 0.091 . EHI_146330 144 KKKKKEK|VL 0.075 . EHI_146330 150 KVLPQFK|VS 0.056 . EHI_146330 154 QFKVSMK|FT 0.067 . EHI_146330 163 PVPVEEK|KL 0.061 . EHI_146330 164 VPVEEKK|LD 0.125 . EHI_146330 175 VLEGEWK|KG 0.063 . EHI_146330 176 LEGEWKK|GF 0.146 . EHI_146330 188 NIISNPK|WY 0.064 . EHI_146330 202 LLTLTGK|LH 0.058 . EHI_146330 206 TGKLHIK|VC 0.061 . EHI_146330 210 HIKVCLK|QD 0.060 . EHI_146330 217 QDNINNR|VT 0.099 . EHI_146330 224 VTFFIVK|YD 0.058 . EHI_146330 233 QVFYENR|PL 0.077 . EHI_146330 245 DPNEVIK|ID 0.080 . EHI_146330 279 IPTNLNR|IS 0.088 . EHI_146330 291 PEPYHGK|FQ 0.073 . EHI_146330 313 IPIDYNK|EW 0.069 . EHI_146330 316 DYNKEWK|FF 0.090 . EHI_146330 322 KFFEDSK|KW 0.061 . EHI_146330 323 FFEDSKK|WT 0.116 . EHI_146330 334 SNGGADR|GS 0.094 . EHI_146330 351 QYVIETK|KD 0.059 . EHI_146330 352 YVIETKK|DT 0.128 . EHI_146330 355 ETKKDTK|MS 0.064 . EHI_146330 366 MEQPDNK|NK 0.058 . EHI_146330 368 QPDNKNK|IG 0.066 . EHI_146330 377 FYLFETK|QT 0.069 . EHI_146330 381 ETKQTDR|KE 0.075 . EHI_146330 382 TKQTDRK|EI 0.123 . EHI_146330 404 SNVCVGK|NF 0.061 . EHI_146330 407 CVGKNFK|LR 0.056 . EHI_146330 409 GKNFKLR|EG 0.106 . EHI_146330 412 FKLREGK|YI 0.126 . EHI_146330 429 GEVGEFK|LK 0.062 . EHI_146330 431 VGEFKLK|IY 0.067 . EHI_146330 442 EENVIIK|EL 0.066 . EHI_146330 446 IIKELTK|EW 0.064 . EHI_146330 459 SVNGEWK|EG 0.071 . EHI_146330 482 NPQYVIK|AK 0.082 . EHI_146330 484 QYVIKAK|YN 0.076 . EHI_146330 487 IKAKYNK|EE 0.063 . EHI_146330 491 YNKEECK|DI 0.094 . EHI_146330 506 FIGASGK|IE 0.075 . EHI_146330 521 FVNLEQK|LD 0.058 . EHI_146330 541 LPEAWVR|NR 0.078 . EHI_146330 543 EAWVRNR|NV 0.125 . EHI_146330 567 VIPSTMK|PN 0.058 . EHI_146330 575 NTFANFK|IT 0.056 . EHI_146330 583 TILTDVK|DV 0.072 . ____________________________^_________________

  • Fasta :-

    >EHI_146330 ATGTCTAAAACACCGAGAGAAAGAGCAGGAAGAGAACCTAAAATGGGAAAAGTAGGAATG CTTACCATTCAATTTGAAGATTGTAAAGATGGTGCATTAGGATATATTGTATGTGATGTT GATCATTTAACATACATTACTACAAAAAAGAAAGCAAGTAAAACATTAAAGATAGATGAA ACATTATATTTTCCAATAAATAGTGCAAGACCAAACATTCATTTCTTTTTATATAAACCA CGTTTAATTGGAAGTAAATGTGTTGGATTTTATCAATTAAATATGGCAGATATAAAAGAA AGTGATCAAGAATTACATTATGTTCAAAGTATAAAGAAACCTAAAAACATTCTTGAACCA GATATTGGAGAAGTTAGACAACCTGAAGAAACTGGAACAGGAAATGATAAAAAGAAAAAA AAGAAAGAAAAAGTATTACCACAATTTAAAGTTTCAATGAAATTTACACCAGTTCCAGTA GAAGAAAAAAAATTAGATGGAATTGTTCTTGAAGGAGAATGGAAAAAAGGATTTGATGCA GGAAATATTATTTCTAATCCTAAATGGTATGAAAATCCACAATTTTTATTAACATTAACA GGAAAATTACATATTAAAGTATGTTTAAAACAAGATAATATTAATAATAGAGTTACATTC TTTATTGTTAAATATGATCAAGTATTTTATGAAAATAGACCATTAACTTTATTTGATCCA AATGAAGTTATTAAAATAGATGAAAATTTCTTAAATACTATGGCTTCTGATAATATTGAA CATTCATTTGAATTAGATGCTGGTTCTTATGTTATTATTCCAACTAATCTTAATAGAATT TCTAGTATTAATCCAGAACCTTATCATGGTAAATTCCAAATTGCTGTTTCAACAGAACAT ATGGAAGCTATTGAATTTATTCCAATTGATTATAATAAAGAATGGAAATTCTTTGAAGAT AGTAAAAAGTGGACACAAACTAGTAATGGAGGAGCTGATAGAGGAAGTCCATATGAATTT TATCATAATTATCAATATGTAATTGAAACTAAGAAAGACACTAAAATGTCTATTACTATG GAACAACCTGATAATAAAAATAAAATTGGATTTTATCTTTTTGAAACTAAACAAACTGAT AGAAAAGAAATTGACTTTGGTGAATTAGTTGAAGAAACTACAAATTTGATTTCAAATGTT TGTGTTGGAAAGAATTTTAAATTAAGAGAAGGAAAATATATTTTAGTTCCATGTACTTCA GAAGCTGGAGAAGTTGGAGAATTTAAATTAAAGATTTATTATGAAGAAGAAAATGTTATA ATTAAAGAATTAACAAAAGAATGGTCAAATATTGTTTCAGTTAATGGTGAATGGAAAGAA GGAACAGCTGGAGGAAGTGTTGATGATCCTGAATCATTTGTAACAAATCCACAATATGTT ATTAAAGCAAAATACAATAAAGAAGAATGTAAAGACATTATTATTTTATTATCACAATTT ATTGGAGCATCAGGAAAGATTGAAAGTATTGGACTACCAGTATTTGTTAATCTTGAACAA AAATTAGATGCTGATGATATAAATGAAGATAACTTAGTTAATTTACCAGAAGCATGGGTA AGAAATAGAAATGTATTTACTTGTTTTGAAGTTGATGAAGAAGATGGATTAGAAGTTATT GTTATTCCATCAACAATGAAACCAAATACATTTGCTAATTTTAAAATTACAATTTTAACT GATGTGAAAGATGTTACAATTGAAGCATTAGAATAA
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  • Fasta :-

    MSKTPRERAGREPKMGKVGMLTIQFEDCKDGALGYIVCDVDHLTYITTKKKASKTLKIDE TLYFPINSARPNIHFFLYKPRLIGSKCVGFYQLNMADIKESDQELHYVQSIKKPKNILEP DIGEVRQPEETGTGNDKKKKKKEKVLPQFKVSMKFTPVPVEEKKLDGIVLEGEWKKGFDA GNIISNPKWYENPQFLLTLTGKLHIKVCLKQDNINNRVTFFIVKYDQVFYENRPLTLFDP NEVIKIDENFLNTMASDNIEHSFELDAGSYVIIPTNLNRISSINPEPYHGKFQIAVSTEH MEAIEFIPIDYNKEWKFFEDSKKWTQTSNGGADRGSPYEFYHNYQYVIETKKDTKMSITM EQPDNKNKIGFYLFETKQTDRKEIDFGELVEETTNLISNVCVGKNFKLREGKYILVPCTS EAGEVGEFKLKIYYEEENVIIKELTKEWSNIVSVNGEWKEGTAGGSVDDPESFVTNPQYV IKAKYNKEECKDIIILLSQFIGASGKIESIGLPVFVNLEQKLDADDINEDNLVNLPEAWV RNRNVFTCFEVDEEDGLEVIVIPSTMKPNTFANFKITILTDVKDVTIEALE

    No Results
IDSitePositionGscoreIscore
EHI_146330T40.5140.029
IDSitePositionGscoreIscore
EHI_146330T40.5140.029
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
EHI_146330336 SADRGSPYEF0.997unspEHI_146330336 SADRGSPYEF0.997unspEHI_146330336 SADRGSPYEF0.997unspEHI_146330466 STAGGSVDDP0.993unspEHI_1463304 T#NAME?0.991unspEHI_146330152 SQFKVSMKFT0.994unsp

EHI_146330      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India