EHI_152110 | ubiquitin carboxyl-terminal hydrolase domain containing protein

UniProt_ID: C4LSP9

Computed_GO_Component_IDs:
Computed_GO_Components:
Computed_GO_Function_IDs: GO:0004221 GO:0036459 GO:0008270
Computed_GO_Functions: obsolete ubiquitin thiolesterase activity thiol-dependent ubiquitinyl hydrolase activity zinc ion binding
Computed_GO_Process_IDs: GO:0016579 GO:0006511
Computed_GO_Processes: protein deubiquitination ubiquitin-dependent protein catabolic process
Curated_GO_Component_IDs:
Curated_GO_Components:
Curated_GO_Function_IDs:
Curated_GO_Functions:
Curated_GO_Processes:

	_ID	Prediction	OTHER	SP	mTP	CS_Position
	EHI_152110	OTHER	0.999757	0.000177	0.000066

No Results

Fasta :-
>EHI_152110 MKRTTQSSSECQSKRTYCPYVETVDRSLIDFDKEKVCCKTLKTNQLYCCMICGKFYQGRD VGSPAYVHSLEENHHIFLSLSTKQFFNLPHGNEVIETSFKDIINALDPVYTLNDISHLDD ENKVIQLKDHFNKKYIIGYIGFNNLGRTDSINCLLQSIGHCKEIRNLLLSYEEIENISSK ARCGELIKRVSMLIRKQWNSTIIKSVISPYELMSELSRLRKNFSIEKQEDVIEFYMFFIN ALLPLTQCFQGQIQIEEDGKKSIKKCTCIPLDLPPMPLYPDQMKEKIIPQLLLKDILKKY DGKTDTLIGKRSVRFLIKTLPKYLTFVIKRFERNTFQGEKNITVVEFEDTLDMSDYVVND SIKQQTKFVFLLLFYKVLLCSLLSYHLVSAIKHDGGIEDGTYSSFLYHQSLKKWFEINNE EVKEAFFPLIKVSAICLLIYEQDE
Download Fasta

MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_152110.fa Sequence name : EHI_152110 Sequence length : 444 VALUES OF COMPUTED PARAMETERS Coef20 : 4.123 CoefTot : 0.203 ChDiff : 1 ZoneTo : 9 KR : 2 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.741 2.300 0.310 0.717 MesoH : -0.515 0.451 -0.403 0.276 MuHd_075 : 6.029 2.286 2.635 0.336 MuHd_095 : 33.629 9.120 6.747 4.921 MuHd_100 : 24.225 11.316 6.968 2.765 MuHd_105 : 16.420 12.594 6.862 2.462 Hmax_075 : -3.733 -5.133 -1.769 -1.948 Hmax_095 : 4.113 -5.300 -1.999 -0.516 Hmax_100 : -2.500 0.100 0.678 -1.690 Hmax_105 : 1.000 0.700 0.431 -0.250 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9130 0.0870 DFMC : 0.8752 0.1248

##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 444 EHI_152110 MKRTTQSSSECQSKRTYCPYVETVDRSLIDFDKEKVCCKTLKTNQLYCCMICGKFYQGRDVGSPAYVHSLEENHHIFLSL 80 STKQFFNLPHGNEVIETSFKDIINALDPVYTLNDISHLDDENKVIQLKDHFNKKYIIGYIGFNNLGRTDSINCLLQSIGH 160 CKEIRNLLLSYEEIENISSKARCGELIKRVSMLIRKQWNSTIIKSVISPYELMSELSRLRKNFSIEKQEDVIEFYMFFIN 240 ALLPLTQCFQGQIQIEEDGKKSIKKCTCIPLDLPPMPLYPDQMKEKIIPQLLLKDILKKYDGKTDTLIGKRSVRFLIKTL 320 PKYLTFVIKRFERNTFQGEKNITVVEFEDTLDMSDYVVNDSIKQQTKFVFLLLFYKVLLCSLLSYHLVSAIKHDGGIEDG 400 TYSSFLYHQSLKKWFEINNEEVKEAFFPLIKVSAICLLIYEQDE 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ............................................ 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_152110 2 -----MK|RT 0.066 . EHI_152110 3 ----MKR|TT 0.155 . EHI_152110 14 SSECQSK|RT 0.063 . EHI_152110 15 SECQSKR|TY 0.253 . EHI_152110 26 YVETVDR|SL 0.115 . EHI_152110 33 SLIDFDK|EK 0.058 . EHI_152110 35 IDFDKEK|VC 0.068 . EHI_152110 39 KEKVCCK|TL 0.065 . EHI_152110 42 VCCKTLK|TN 0.062 . EHI_152110 54 CCMICGK|FY 0.065 . EHI_152110 59 GKFYQGR|DV 0.204 . EHI_152110 83 FLSLSTK|QF 0.072 . EHI_152110 100 VIETSFK|DI 0.080 . EHI_152110 123 HLDDENK|VI 0.059 . EHI_152110 128 NKVIQLK|DH 0.066 . EHI_152110 133 LKDHFNK|KY 0.072 . EHI_152110 134 KDHFNKK|YI 0.156 . EHI_152110 147 GFNNLGR|TD 0.085 . EHI_152110 162 QSIGHCK|EI 0.073 . EHI_152110 165 GHCKEIR|NL 0.079 . EHI_152110 180 IENISSK|AR 0.069 . EHI_152110 182 NISSKAR|CG 0.123 . EHI_152110 188 RCGELIK|RV 0.068 . EHI_152110 189 CGELIKR|VS 0.127 . EHI_152110 195 RVSMLIR|KQ 0.094 . EHI_152110 196 VSMLIRK|QW 0.072 . EHI_152110 204 WNSTIIK|SV 0.100 . EHI_152110 218 LMSELSR|LR 0.069 . EHI_152110 220 SELSRLR|KN 0.087 . EHI_152110 221 ELSRLRK|NF 0.245 . EHI_152110 227 KNFSIEK|QE 0.066 . EHI_152110 260 QIEEDGK|KS 0.061 . EHI_152110 261 IEEDGKK|SI 0.145 . EHI_152110 264 DGKKSIK|KC 0.061 . EHI_152110 265 GKKSIKK|CT 0.129 . EHI_152110 284 LYPDQMK|EK 0.058 . EHI_152110 286 PDQMKEK|II 0.071 . EHI_152110 294 IPQLLLK|DI 0.076 . EHI_152110 298 LLKDILK|KY 0.068 . EHI_152110 299 LKDILKK|YD 0.112 . EHI_152110 303 LKKYDGK|TD 0.062 . EHI_152110 310 TDTLIGK|RS 0.057 . EHI_152110 311 DTLIGKR|SV 0.254 . EHI_152110 314 IGKRSVR|FL 0.344 . EHI_152110 318 SVRFLIK|TL 0.070 . EHI_152110 322 LIKTLPK|YL 0.072 . EHI_152110 329 YLTFVIK|RF 0.068 . EHI_152110 330 LTFVIKR|FE 0.166 . EHI_152110 333 VIKRFER|NT 0.399 . EHI_152110 340 NTFQGEK|NI 0.064 . EHI_152110 363 VVNDSIK|QQ 0.063 . EHI_152110 367 SIKQQTK|FV 0.091 . EHI_152110 376 FLLLFYK|VL 0.056 . EHI_152110 392 HLVSAIK|HD 0.080 . EHI_152110 412 LYHQSLK|KW 0.068 . EHI_152110 413 YHQSLKK|WF 0.097 . EHI_152110 423 INNEEVK|EA 0.065 . EHI_152110 431 AFFPLIK|VS 0.054 . ____________________________^_________________

Fasta :-
>EHI_152110 ATGAAAAGAACAACTCAAAGCTCTAGTGAGTGTCAAAGTAAAAGAACATACTGTCCATAT GTAGAAACTGTTGACAGAAGTCTTATTGATTTTGATAAAGAAAAGGTATGTTGTAAAACC TTAAAGACAAATCAATTATATTGTTGTATGATTTGTGGAAAGTTTTATCAAGGAAGAGAT GTTGGGTCTCCTGCTTATGTCCATAGTTTAGAAGAGAATCATCATATCTTTCTTTCTTTA AGTACAAAACAATTTTTTAATTTACCACATGGAAATGAAGTAATTGAAACGTCGTTTAAA GATATTATTAATGCATTAGATCCTGTATATACTTTAAATGATATATCTCATCTTGATGAT GAAAATAAAGTAATCCAATTAAAAGATCATTTTAATAAGAAATATATTATTGGGTATATT GGATTTAATAACTTAGGAAGGACTGACTCTATCAATTGTTTACTTCAAAGTATTGGACAT TGTAAAGAAATTAGAAACTTATTACTTAGTTATGAAGAAATAGAAAATATATCATCGAAA GCAAGGTGTGGAGAGTTAATTAAACGAGTTAGTATGTTAATAAGAAAACAATGGAATTCA ACAATAATTAAATCAGTAATTTCACCATATGAATTAATGAGTGAACTAAGTAGATTAAGA AAAAATTTCAGTATAGAAAAACAAGAAGATGTAATAGAATTTTATATGTTTTTCATAAAT GCATTACTTCCTCTAACCCAATGTTTTCAAGGACAAATACAAATAGAAGAAGATGGAAAG AAATCTATTAAAAAATGTACTTGCATTCCATTAGACCTTCCTCCAATGCCTTTATATCCA GATCAAATGAAAGAAAAAATAATTCCTCAGTTGTTACTTAAAGATATACTTAAAAAGTAT GACGGTAAAACAGACACACTTATTGGTAAACGTAGTGTGAGGTTTTTAATAAAAACATTA CCAAAGTATTTAACATTCGTTATTAAACGGTTTGAGAGAAATACTTTTCAAGGAGAGAAA AATATTACTGTTGTTGAGTTTGAAGATACTTTAGATATGTCGGATTATGTAGTTAATGAT TCAATAAAACAACAAACCAAGTTTGTCTTTTTGTTACTTTTTTATAAAGTATTATTATGC TCATTACTTAGTTATCATTTGGTATCAGCAATAAAACATGATGGAGGTATTGAAGATGGA ACATACTCCTCCTTTTTATATCATCAGTCTTTAAAAAAGTGGTTTGAAATTAATAACGAA GAGGTGAAAGAAGCATTTTTCCCATTAATTAAAGTATCAGCAATATGCTTGTTAATATAT GAACAAGATGAATAA
Download Fasta

Fasta :-

MKRTTQSSSECQSKRTYCPYVETVDRSLIDFDKEKVCCKTLKTNQLYCCMICGKFYQGRD VGSPAYVHSLEENHHIFLSLSTKQFFNLPHGNEVIETSFKDIINALDPVYTLNDISHLDD ENKVIQLKDHFNKKYIIGYIGFNNLGRTDSINCLLQSIGHCKEIRNLLLSYEEIENISSK ARCGELIKRVSMLIRKQWNSTIIKSVISPYELMSELSRLRKNFSIEKQEDVIEFYMFFIN ALLPLTQCFQGQIQIEEDGKKSIKKCTCIPLDLPPMPLYPDQMKEKIIPQLLLKDILKKY DGKTDTLIGKRSVRFLIKTLPKYLTFVIKRFERNTFQGEKNITVVEFEDTLDMSDYVVND SIKQQTKFVFLLLFYKVLLCSLLSYHLVSAIKHDGGIEDGTYSSFLYHQSLKKWFEINNE EVKEAFFPLIKVSAICLLIYEQDE

Zf-UBP

title: Active Site
coordinates: N144,D149,T401,N419

	ID	Site	Position	Gscore	Iscore
	EHI_152110	T	4	0.531	0.020

	ID	Site	Position	Gscore	Iscore
	EHI_152110	T	4	0.531	0.020

	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method	ID	Site	Peptide	Score	Method
	EHI_152110	98 S	VIETSFKDI	0.993	unsp	EHI_152110	98 S	VIETSFKDI	0.993	unsp	EHI_152110	98 S	VIETSFKDI	0.993	unsp	EHI_152110	170 S	NLLLSYEEI	0.997	unsp	EHI_152110	208 S	KSVISPYEL	0.996	unsp	EHI_152110	8 S	TTQSSSECQ	0.994	unsp	EHI_152110	27 S	TVDRSLIDF	0.994	unsp

EHI_152110 | ubiquitin carboxyl-terminal hydrolase domain containing protein

ID's

UniProt_ID: C4LSP9

GEO Functions

Computed_GO_Component_IDs:

Computed_GO_Components:

Computed_GO_Function_IDs: GO:0004221 GO:0036459 GO:0008270

Computed_GO_Functions: obsolete ubiquitin thiolesterase activity thiol-dependent ubiquitinyl hydrolase activity zinc ion binding

Computed_GO_Process_IDs: GO:0016579 GO:0006511

Computed_GO_Processes: protein deubiquitination ubiquitin-dependent protein catabolic process

Curated_GO_Component_IDs:

Curated_GO_Components:

Curated_GO_Function_IDs:

Curated_GO_Functions:

Curated_GO_Processes:

Subcellular Localization

Targetp

Signalp

Fasta :-

Mitoprot

ProPeptide Prediction

Sequence

Nucleotide sequence

Fasta :-

Protein sequence

Fasta :-

Domains

Zf-UBP

Structure

Post Translational Modifications

N_Linked Glycosylation

O_Linked Glycosylation

Phosphorylation

Protein-Protein Interaction

String

EHI_152110

Literature

PubMed

Google Scholar

Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India