EHI_153350 | prolyl oligopeptidase family protein

_IDPredictionOTHERSPmTPCS_Position
EHI_153350OTHER0.9969790.0009880.002033
No Results

  • Fasta :-

    >EHI_153350 MTNISKSNLIIKNRKFTAEALWSMGRINGYDLFDNKLLYTVSYYDIPKNGSSSHIIIKTL NSKEYTDLTSKMRDSNDQLTKNCAQSQTNAIFDKNGRGILFNSNGKLFEYYFDSEQVEQL STGSLDISEFKISPDYSKCLFISSVEHSYKNEDYNDLPLTSGMIFEDLNYRHWDEFNTSL PHPFVSKLNNMKFEDHPFDILENEPYESPLKPFGGIEQLCWSKDSKKIAYTCKKKVGKEY ATSTDSDIYVYDTETKTTINLCKDFEPKNYGFDSNPMYSPSGKKIAWVSMERDGYESDRS RLIIFDLGTKKKSFVSEWFESNVESFDWINDCQMVFTGVWHGLTHIYLIEINNDNELVNH EQITTGQYDYKSVKWFGNMLIVKRQSMIEADELYELDLKTKEIKQISFENDFIYTQIDKA SVQPKWMKTVDNKDMLVWVIYPPHFDSTKKYPTLLYCQGGPQSAVSQFWSYRWNFLLMAS EGYIIIAPNRRGLPGFGMEWLEEISLDYGGLCMKDLLTSVDIMKEESYVDSDRLGCVGAS FGGYSVYWLAGHHQKRFKVFIAHDGIFNTEEQYIETEEMWFSQWDMGSAVWEGKEKSKKT YENSPHRFVEEWDTPILCIHSEKDYRVVVSQGIAAFNAARMKGVAAELLYFPDENHWVVK AQNGMLWQRTFFRWLRRWLE
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_153350.fa Sequence name : EHI_153350 Sequence length : 680 VALUES OF COMPUTED PARAMETERS Coef20 : 4.369 CoefTot : -0.119 ChDiff : -21 ZoneTo : 18 KR : 4 DE : 0 CleavSite : 24 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.494 1.071 0.248 0.599 MesoH : -0.385 0.218 -0.339 0.233 MuHd_075 : 8.766 12.212 3.314 2.176 MuHd_095 : 14.557 5.252 1.838 2.818 MuHd_100 : 7.976 5.697 0.895 1.776 MuHd_105 : 4.373 7.397 3.344 1.295 Hmax_075 : -1.283 10.850 -0.042 2.147 Hmax_095 : 0.000 4.800 -2.946 1.880 Hmax_100 : -1.600 6.500 -1.676 1.600 Hmax_105 : 0.700 9.300 0.229 2.090 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.5212 0.4788 DFMC : 0.4622 0.5378 This protein is probably imported in mitochondria. f(Ser) = 0.1111 f(Arg) = 0.0556 CMi = 0.75188 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 680 EHI_153350 MTNISKSNLIIKNRKFTAEALWSMGRINGYDLFDNKLLYTVSYYDIPKNGSSSHIIIKTLNSKEYTDLTSKMRDSNDQLT 80 KNCAQSQTNAIFDKNGRGILFNSNGKLFEYYFDSEQVEQLSTGSLDISEFKISPDYSKCLFISSVEHSYKNEDYNDLPLT 160 SGMIFEDLNYRHWDEFNTSLPHPFVSKLNNMKFEDHPFDILENEPYESPLKPFGGIEQLCWSKDSKKIAYTCKKKVGKEY 240 ATSTDSDIYVYDTETKTTINLCKDFEPKNYGFDSNPMYSPSGKKIAWVSMERDGYESDRSRLIIFDLGTKKKSFVSEWFE 320 SNVESFDWINDCQMVFTGVWHGLTHIYLIEINNDNELVNHEQITTGQYDYKSVKWFGNMLIVKRQSMIEADELYELDLKT 400 KEIKQISFENDFIYTQIDKASVQPKWMKTVDNKDMLVWVIYPPHFDSTKKYPTLLYCQGGPQSAVSQFWSYRWNFLLMAS 480 EGYIIIAPNRRGLPGFGMEWLEEISLDYGGLCMKDLLTSVDIMKEESYVDSDRLGCVGASFGGYSVYWLAGHHQKRFKVF 560 IAHDGIFNTEEQYIETEEMWFSQWDMGSAVWEGKEKSKKTYENSPHRFVEEWDTPILCIHSEKDYRVVVSQGIAAFNAAR 640 MKGVAAELLYFPDENHWVVKAQNGMLWQRTFFRWLRRWLE 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ........................................ 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_153350 6 -MTNISK|SN 0.064 . EHI_153350 12 KSNLIIK|NR 0.058 . EHI_153350 14 NLIIKNR|KF 0.096 . EHI_153350 15 LIIKNRK|FT 0.113 . EHI_153350 26 ALWSMGR|IN 0.090 . EHI_153350 36 YDLFDNK|LL 0.056 . EHI_153350 48 SYYDIPK|NG 0.061 . EHI_153350 58 SSHIIIK|TL 0.080 . EHI_153350 63 IKTLNSK|EY 0.058 . EHI_153350 71 YTDLTSK|MR 0.053 . EHI_153350 73 DLTSKMR|DS 0.120 . EHI_153350 81 SNDQLTK|NC 0.069 . EHI_153350 94 TNAIFDK|NG 0.079 . EHI_153350 97 IFDKNGR|GI 0.075 . EHI_153350 106 LFNSNGK|LF 0.064 . EHI_153350 131 LDISEFK|IS 0.059 . EHI_153350 138 ISPDYSK|CL 0.062 . EHI_153350 150 SVEHSYK|NE 0.061 . EHI_153350 171 FEDLNYR|HW 0.082 . EHI_153350 187 PHPFVSK|LN 0.062 . EHI_153350 192 SKLNNMK|FE 0.069 . EHI_153350 211 PYESPLK|PF 0.065 . EHI_153350 223 EQLCWSK|DS 0.063 . EHI_153350 226 CWSKDSK|KI 0.064 . EHI_153350 227 WSKDSKK|IA 0.122 . EHI_153350 233 KIAYTCK|KK 0.071 . EHI_153350 234 IAYTCKK|KV 0.198 . EHI_153350 235 AYTCKKK|VG 0.076 . EHI_153350 238 CKKKVGK|EY 0.075 . EHI_153350 256 VYDTETK|TT 0.056 . EHI_153350 263 TTINLCK|DF 0.096 . EHI_153350 268 CKDFEPK|NY 0.062 . EHI_153350 283 MYSPSGK|KI 0.076 . EHI_153350 284 YSPSGKK|IA 0.093 . EHI_153350 292 AWVSMER|DG 0.082 . EHI_153350 299 DGYESDR|SR 0.113 . EHI_153350 301 YESDRSR|LI 0.100 . EHI_153350 310 IFDLGTK|KK 0.055 . EHI_153350 311 FDLGTKK|KS 0.087 . EHI_153350 312 DLGTKKK|SF 0.151 . EHI_153350 371 TGQYDYK|SV 0.136 . EHI_153350 374 YDYKSVK|WF 0.074 . EHI_153350 383 GNMLIVK|RQ 0.070 . EHI_153350 384 NMLIVKR|QS 0.158 . EHI_153350 399 LYELDLK|TK 0.057 . EHI_153350 401 ELDLKTK|EI 0.064 . EHI_153350 404 LKTKEIK|QI 0.072 . EHI_153350 419 IYTQIDK|AS 0.054 . EHI_153350 425 KASVQPK|WM 0.088 . EHI_153350 428 VQPKWMK|TV 0.079 . EHI_153350 433 MKTVDNK|DM 0.063 . EHI_153350 449 PHFDSTK|KY 0.063 . EHI_153350 450 HFDSTKK|YP 0.084 . EHI_153350 472 SQFWSYR|WN 0.097 . EHI_153350 490 IIIAPNR|RG 0.087 . EHI_153350 491 IIAPNRR|GL 0.152 . EHI_153350 514 YGGLCMK|DL 0.069 . EHI_153350 524 TSVDIMK|EE 0.067 . EHI_153350 533 SYVDSDR|LG 0.078 . EHI_153350 555 LAGHHQK|RF 0.065 . EHI_153350 556 AGHHQKR|FK 0.259 . EHI_153350 558 HHQKRFK|VF 0.074 . EHI_153350 594 SAVWEGK|EK 0.069 . EHI_153350 596 VWEGKEK|SK 0.091 . EHI_153350 598 EGKEKSK|KT 0.067 . EHI_153350 599 GKEKSKK|TY 0.144 . EHI_153350 607 YENSPHR|FV 0.156 . EHI_153350 623 LCIHSEK|DY 0.083 . EHI_153350 626 HSEKDYR|VV 0.120 . EHI_153350 640 AAFNAAR|MK 0.106 . EHI_153350 642 FNAARMK|GV 0.101 . EHI_153350 660 ENHWVVK|AQ 0.084 . EHI_153350 669 NGMLWQR|TF 0.084 . EHI_153350 673 WQRTFFR|WL 0.113 . EHI_153350 676 TFFRWLR|RW 0.174 . EHI_153350 677 FFRWLRR|WL 0.170 . ____________________________^_________________

  • Fasta :-

    >EHI_153350 ATGACTAATATCTCAAAATCAAATCTTATAATTAAAAATAGAAAATTCACAGCTGAGGCT TTATGGTCAATGGGACGAATTAATGGATATGACCTTTTTGATAACAAATTGTTATATACA GTTTCCTATTATGACATACCTAAAAATGGAAGTTCAAGTCATATCATTATTAAAACATTA AATTCAAAAGAGTACACAGACCTTACTTCAAAAATGAGAGACAGTAATGACCAACTAACT AAAAATTGTGCACAGTCTCAAACTAATGCGATTTTTGATAAAAATGGAAGAGGAATCTTA TTTAATTCAAATGGAAAGTTGTTCGAATATTATTTTGATTCAGAACAAGTAGAACAACTC TCAACAGGTTCTTTAGATATTAGTGAATTTAAAATATCTCCAGACTATTCTAAATGTTTA TTTATTTCATCTGTTGAACATAGCTACAAAAATGAAGACTATAATGATTTACCTTTGACT AGTGGAATGATATTTGAAGACTTAAATTATCGTCATTGGGATGAGTTTAATACATCTCTA CCTCATCCATTTGTTTCAAAATTAAATAATATGAAATTTGAAGATCATCCATTTGACATT CTTGAAAATGAACCATATGAATCACCATTAAAGCCATTTGGTGGAATAGAACAATTATGT TGGTCAAAAGACTCGAAGAAAATAGCATATACATGTAAGAAGAAAGTAGGAAAAGAATAT GCGACATCAACAGACTCAGACATTTATGTCTATGATACTGAAACAAAGACAACCATTAAT CTTTGTAAAGACTTTGAACCAAAGAATTATGGGTTTGACTCAAATCCAATGTACTCACCT AGTGGAAAAAAAATTGCATGGGTTAGCATGGAACGTGATGGATATGAAAGTGATCGTAGT AGATTAATTATATTTGACCTAGGCACTAAGAAAAAAAGTTTTGTGTCAGAATGGTTTGAA AGTAACGTTGAAAGTTTTGATTGGATTAACGATTGTCAAATGGTATTTACTGGTGTATGG CATGGCTTAACACATATATATCTTATTGAAATTAATAACGATAATGAATTAGTTAATCAT GAGCAAATTACAACAGGGCAATATGACTATAAGTCTGTTAAATGGTTTGGAAATATGTTA ATTGTTAAAAGACAATCAATGATAGAGGCTGATGAGTTATATGAACTTGATTTAAAAACT AAAGAAATCAAACAAATTAGCTTCGAAAATGATTTTATCTATACCCAAATAGATAAAGCC TCTGTGCAACCAAAGTGGATGAAAACAGTTGACAATAAAGACATGTTAGTTTGGGTTATT TATCCACCTCATTTTGATTCAACAAAAAAATATCCAACGTTGCTGTATTGTCAAGGTGGT CCTCAAAGTGCTGTTAGTCAATTTTGGTCTTACAGATGGAATTTCTTATTAATGGCATCA GAAGGGTACATTATTATTGCACCGAATAGAAGAGGATTACCAGGTTTTGGAATGGAATGG TTAGAAGAAATTTCATTAGATTATGGAGGTCTTTGTATGAAGGATTTGTTAACTTCTGTT GACATAATGAAAGAAGAGTCATACGTTGATTCTGACAGACTTGGATGTGTTGGAGCAAGT TTTGGAGGATATTCGGTTTATTGGCTTGCTGGGCATCATCAAAAACGATTCAAAGTATTT ATTGCACATGATGGAATATTTAATACAGAGGAACAATATATAGAAACAGAAGAAATGTGG TTTTCACAATGGGATATGGGAAGTGCTGTGTGGGAAGGAAAAGAGAAAAGTAAGAAAACA TATGAAAATTCACCACACCGATTTGTTGAAGAATGGGACACACCTATTTTATGTATTCAT AGTGAAAAAGATTATCGAGTAGTGGTGAGCCAAGGGATTGCAGCATTTAATGCTGCAAGG ATGAAAGGAGTGGCAGCGGAGTTATTATATTTTCCCGACGAAAACCACTGGGTTGTTAAA GCACAAAATGGGATGTTATGGCAAAGAACATTTTTTAGATGGTTGAGACGATGGTTAGAA TGA
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  • Fasta :-

    MTNISKSNLIIKNRKFTAEALWSMGRINGYDLFDNKLLYTVSYYDIPKNGSSSHIIIKTL NSKEYTDLTSKMRDSNDQLTKNCAQSQTNAIFDKNGRGILFNSNGKLFEYYFDSEQVEQL STGSLDISEFKISPDYSKCLFISSVEHSYKNEDYNDLPLTSGMIFEDLNYRHWDEFNTSL PHPFVSKLNNMKFEDHPFDILENEPYESPLKPFGGIEQLCWSKDSKKIAYTCKKKVGKEY ATSTDSDIYVYDTETKTTINLCKDFEPKNYGFDSNPMYSPSGKKIAWVSMERDGYESDRS RLIIFDLGTKKKSFVSEWFESNVESFDWINDCQMVFTGVWHGLTHIYLIEINNDNELVNH EQITTGQYDYKSVKWFGNMLIVKRQSMIEADELYELDLKTKEIKQISFENDFIYTQIDKA SVQPKWMKTVDNKDMLVWVIYPPHFDSTKKYPTLLYCQGGPQSAVSQFWSYRWNFLLMAS EGYIIIAPNRRGLPGFGMEWLEEISLDYGGLCMKDLLTSVDIMKEESYVDSDRLGCVGAS FGGYSVYWLAGHHQKRFKVFIAHDGIFNTEEQYIETEEMWFSQWDMGSAVWEGKEKSKKT YENSPHRFVEEWDTPILCIHSEKDYRVVVSQGIAAFNAARMKGVAAELLYFPDENHWVVK AQNGMLWQRTFFRWLRRWLE

  • title: WD40 repeat
  • coordinates: E217-P267
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
EHI_153350386 SVKRQSMIEA0.998unspEHI_153350386 SVKRQSMIEA0.998unspEHI_153350386 SVKRQSMIEA0.998unspEHI_153350527 SMKEESYVDS0.997unspEHI_153350528 YKEESYVDSD0.993unspEHI_153350621 SLCIHSEKDY0.997unspEHI_15335062 SKTLNSKEYT0.991unspEHI_153350148 SSVEHSYKNE0.997unsp

EHI_153350      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India