EHI_168240 | cysteine proteinase, putative

_IDPredictionOTHERSPmTPCS_Position
EHI_168240SP0.0196100.9798390.000552CS pos: 13-14. AYA-TN. Pr: 0.5011
No Results

  • Fasta :-

    >EHI_168240 MFTVLLLVVVAYATNFNTWVANNNKHFTIVESLRRRAIFNNNARFIAKFNKNNSFQLSVE GPFAAMTEAEYNSMLKPFVIDKQHEEIVYDSRGDVPESVDWRAKGKVPAIRDQASCGSCY SFASVAAIEGRLLVAGSKKFTVDDLDLSEQQLVDCSVSVGNKGCNGGSLLLSFRYVKLNG IMQEKDYPYVAAEETCTYDKKKVAVKITGQKLVRPGSEKALMRAAAEGPVAAAIDASGVK FQLYKSGIYNSKECSSTQLNHGVAVVGYGTQNGTEYWIVRNSWGTIWGDQGYVLMSRNKN NQCGIASGAAYPVGVADA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_168240.fa Sequence name : EHI_168240 Sequence length : 318 VALUES OF COMPUTED PARAMETERS Coef20 : 4.802 CoefTot : -0.265 ChDiff : 5 ZoneTo : 59 KR : 7 DE : 1 CleavSite : 54 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.465 1.741 0.224 0.626 MesoH : -0.569 0.292 -0.308 0.166 MuHd_075 : 42.895 26.601 12.509 8.314 MuHd_095 : 40.802 21.767 10.354 9.675 MuHd_100 : 34.596 17.713 8.195 8.360 MuHd_105 : 32.415 17.847 8.716 7.472 Hmax_075 : 15.167 15.517 2.434 4.310 Hmax_095 : 3.500 9.400 -0.913 3.680 Hmax_100 : 7.700 10.400 -0.753 4.840 Hmax_105 : 0.200 9.100 -0.677 4.840 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.1093 0.8907 DFMC : 0.0797 0.9203 This protein is probably imported in mitochondria. f(Ser) = 0.0508 f(Arg) = 0.0678 CMi = 0.30832 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 318 EHI_168240 MFTVLLLVVVAYATNFNTWVANNNKHFTIVESLRRRAIFNNNARFIAKFNKNNSFQLSVEGPFAAMTEAEYNSMLKPFVI 80 DKQHEEIVYDSRGDVPESVDWRAKGKVPAIRDQASCGSCYSFASVAAIEGRLLVAGSKKFTVDDLDLSEQQLVDCSVSVG 160 NKGCNGGSLLLSFRYVKLNGIMQEKDYPYVAAEETCTYDKKKVAVKITGQKLVRPGSEKALMRAAAEGPVAAAIDASGVK 240 FQLYKSGIYNSKECSSTQLNHGVAVVGYGTQNGTEYWIVRNSWGTIWGDQGYVLMSRNKNNQCGIASGAAYPVGVADA 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .............................................................................. 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_168240 25 WVANNNK|HF 0.072 . EHI_168240 34 TIVESLR|RR 0.073 . EHI_168240 35 IVESLRR|RA 0.098 . EHI_168240 36 VESLRRR|AI 0.164 . EHI_168240 44 IFNNNAR|FI 0.113 . EHI_168240 48 NARFIAK|FN 0.073 . EHI_168240 51 FIAKFNK|NN 0.078 . EHI_168240 76 EYNSMLK|PF 0.058 . EHI_168240 82 KPFVIDK|QH 0.070 . EHI_168240 92 EIVYDSR|GD 0.076 . EHI_168240 102 PESVDWR|AK 0.151 . EHI_168240 104 SVDWRAK|GK 0.073 . EHI_168240 106 DWRAKGK|VP 0.062 . EHI_168240 111 GKVPAIR|DQ 0.111 . EHI_168240 131 VAAIEGR|LL 0.093 . EHI_168240 138 LLVAGSK|KF 0.056 . EHI_168240 139 LVAGSKK|FT 0.127 . EHI_168240 162 SVSVGNK|GC 0.066 . EHI_168240 174 SLLLSFR|YV 0.120 . EHI_168240 177 LSFRYVK|LN 0.114 . EHI_168240 185 NGIMQEK|DY 0.066 . EHI_168240 200 ETCTYDK|KK 0.057 . EHI_168240 201 TCTYDKK|KV 0.135 . EHI_168240 202 CTYDKKK|VA 0.153 . EHI_168240 206 KKKVAVK|IT 0.090 . EHI_168240 211 VKITGQK|LV 0.067 . EHI_168240 214 TGQKLVR|PG 0.092 . EHI_168240 219 VRPGSEK|AL 0.067 . EHI_168240 223 SEKALMR|AA 0.145 . EHI_168240 240 IDASGVK|FQ 0.056 . EHI_168240 245 VKFQLYK|SG 0.069 . EHI_168240 252 SGIYNSK|EC 0.064 . EHI_168240 280 TEYWIVR|NS 0.094 . EHI_168240 297 GYVLMSR|NK 0.071 . EHI_168240 299 VLMSRNK|NN 0.062 . ____________________________^_________________

  • Fasta :-

    >EHI_168240 ATGTTCACTGTTCTGTTATTAGTGGTTGTAGCATATGCTACAAATTTCAATACTTGGGTT GCAAATAATAATAAACATTTTACTATTGTTGAATCTCTTAGAAGAAGAGCTATTTTCAAT AATAATGCTCGTTTTATTGCTAAATTCAATAAGAACAATTCATTCCAATTATCAGTTGAA GGACCATTTGCTGCTATGACTGAGGCTGAATATAATTCTATGTTAAAACCATTTGTCATT GATAAACAACATGAAGAGATTGTTTATGATTCTAGGGGAGATGTACCAGAATCTGTTGAT TGGAGAGCTAAAGGGAAAGTTCCAGCTATTAGAGACCAAGCATCATGTGGATCATGTTAT AGTTTTGCTTCTGTTGCTGCTATTGAAGGAAGATTGTTGGTTGCTGGATCAAAGAAATTT ACAGTTGATGACCTTGATCTTTCTGAGCAACAACTTGTTGATTGCTCAGTTTCTGTTGGA AATAAAGGATGTAATGGAGGTTCTCTTCTTTTAAGTTTCAGATATGTTAAATTAAATGGA ATAATGCAAGAAAAAGATTATCCATATGTTGCTGCTGAAGAAACTTGTACTTATGATAAG AAGAAAGTTGCTGTTAAAATTACTGGACAAAAATTAGTTAGACCAGGAAGTGAAAAAGCA CTTATGCGTGCTGCTGCTGAAGGACCAGTTGCCGCTGCTATTGATGCTTCTGGAGTTAAA TTCCAATTATATAAGAGTGGTATATATAATAGTAAAGAATGTTCATCAACTCAGCTTAAT CATGGTGTAGCAGTAGTTGGTTATGGTACTCAAAATGGAACTGAATATTGGATTGTTAGA AATTCATGGGGAACTATTTGGGGAGATCAAGGATATGTTTTAATGTCAAGAAATAAGAAT AATCAATGTGGTATTGCTTCAGGAGCTGCTTATCCAGTTGGGGTTGCTGATGCTTAAGAG ATTTTGATTTAA
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  • Fasta :-

    MFTVLLLVVVAYATNFNTWVANNNKHFTIVESLRRRAIFNNNARFIAKFNKNNSFQLSVE GPFAAMTEAEYNSMLKPFVIDKQHEEIVYDSRGDVPESVDWRAKGKVPAIRDQASCGSCY SFASVAAIEGRLLVAGSKKFTVDDLDLSEQQLVDCSVSVGNKGCNGGSLLLSFRYVKLNG IMQEKDYPYVAAEETCTYDKKKVAVKITGQKLVRPGSEKALMRAAAEGPVAAAIDASGVK FQLYKSGIYNSKECSSTQLNHGVAVVGYGTQNGTEYWIVRNSWGTIWGDQGYVLMSRNKN NQCGIASGAAYPVGVADA

  • title: active site
  • coordinates: Q113,C119,H261,N281
No Results
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EHI_168240      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India