EHI_177320 | 26S protease regulatory subunit, putative

_IDPredictionOTHERSPmTPCS_Position
EHI_177320OTHER0.9999390.0000390.000022
No Results

  • Fasta :-

    >EHI_177320 MSETKHQLRDAYLKMKSLQADLDHLRLIDGYIHEEQQALRLELSRAQEEVKRVQSVPLHI GQFVEMVDKDTAVVTLSSGTTQFVRILSTINRELLKPGTSVAHHKQSNALVDVLPPEADS AIRILSKGETPNVTYADIGGCDIQKQEIREAVELPLTQSELYKQIGIDPPRGCLLYGPPG TGKTMLAKAVAHHTSASFIQIVGSEFAQQYLGEGPRMVRDVFRLARENAPSIVFIDEVDS IATKRHDAQNGADREVQRVLLELLTQMDGFDQTTNVKVIMATNRADSLDPALLRPGRLDR KIEFPLPDRRQKRLIFQVLTSKMNLSKEIDLEDYASRPDKISGAEIASICQEAGMHAVRK NRYIILPADFEKAYKKVVRKQTQAMDFYR
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_177320.fa Sequence name : EHI_177320 Sequence length : 389 VALUES OF COMPUTED PARAMETERS Coef20 : 3.827 CoefTot : 0.112 ChDiff : 0 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.729 0.971 0.006 0.366 MesoH : -0.705 0.151 -0.414 0.159 MuHd_075 : 17.726 9.311 5.387 3.719 MuHd_095 : 21.854 10.892 5.842 4.283 MuHd_100 : 29.600 16.659 7.458 5.597 MuHd_105 : 32.856 19.067 8.090 5.855 Hmax_075 : 1.300 5.100 -1.161 2.590 Hmax_095 : 2.900 3.600 -2.303 1.820 Hmax_100 : 14.500 11.200 1.316 4.310 Hmax_105 : 2.013 4.463 -2.719 1.488 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9165 0.0835 DFMC : 0.8091 0.1909
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 389 EHI_177320 MSETKHQLRDAYLKMKSLQADLDHLRLIDGYIHEEQQALRLELSRAQEEVKRVQSVPLHIGQFVEMVDKDTAVVTLSSGT 80 TQFVRILSTINRELLKPGTSVAHHKQSNALVDVLPPEADSAIRILSKGETPNVTYADIGGCDIQKQEIREAVELPLTQSE 160 LYKQIGIDPPRGCLLYGPPGTGKTMLAKAVAHHTSASFIQIVGSEFAQQYLGEGPRMVRDVFRLARENAPSIVFIDEVDS 240 IATKRHDAQNGADREVQRVLLELLTQMDGFDQTTNVKVIMATNRADSLDPALLRPGRLDRKIEFPLPDRRQKRLIFQVLT 320 SKMNLSKEIDLEDYASRPDKISGAEIASICQEAGMHAVRKNRYIILPADFEKAYKKVVRKQTQAMDFYR 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ........................................................................P....... 320 ..................................................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ EHI_177320 5 --MSETK|HQ 0.054 . EHI_177320 9 ETKHQLR|DA 0.125 . EHI_177320 14 LRDAYLK|MK 0.064 . EHI_177320 16 DAYLKMK|SL 0.098 . EHI_177320 26 ADLDHLR|LI 0.096 . EHI_177320 40 EEQQALR|LE 0.062 . EHI_177320 45 LRLELSR|AQ 0.094 . EHI_177320 51 RAQEEVK|RV 0.075 . EHI_177320 52 AQEEVKR|VQ 0.150 . EHI_177320 69 FVEMVDK|DT 0.068 . EHI_177320 85 GTTQFVR|IL 0.103 . EHI_177320 92 ILSTINR|EL 0.100 . EHI_177320 96 INRELLK|PG 0.065 . EHI_177320 105 TSVAHHK|QS 0.082 . EHI_177320 123 EADSAIR|IL 0.112 . EHI_177320 127 AIRILSK|GE 0.066 . EHI_177320 145 GGCDIQK|QE 0.059 . EHI_177320 149 IQKQEIR|EA 0.098 . EHI_177320 163 TQSELYK|QI 0.097 . EHI_177320 171 IGIDPPR|GC 0.083 . EHI_177320 183 GPPGTGK|TM 0.059 . EHI_177320 188 GKTMLAK|AV 0.087 . EHI_177320 216 YLGEGPR|MV 0.145 . EHI_177320 219 EGPRMVR|DV 0.294 . EHI_177320 223 MVRDVFR|LA 0.128 . EHI_177320 226 DVFRLAR|EN 0.208 . EHI_177320 244 VDSIATK|RH 0.066 . EHI_177320 245 DSIATKR|HD 0.191 . EHI_177320 254 AQNGADR|EV 0.136 . EHI_177320 258 ADREVQR|VL 0.105 . EHI_177320 277 DQTTNVK|VI 0.057 . EHI_177320 284 VIMATNR|AD 0.082 . EHI_177320 294 LDPALLR|PG 0.070 . EHI_177320 297 ALLRPGR|LD 0.217 . EHI_177320 300 RPGRLDR|KI 0.309 . EHI_177320 301 PGRLDRK|IE 0.069 . EHI_177320 309 EFPLPDR|RQ 0.062 . EHI_177320 310 FPLPDRR|QK 0.103 . EHI_177320 312 LPDRRQK|RL 0.131 . EHI_177320 313 PDRRQKR|LI 0.760 *ProP* EHI_177320 322 FQVLTSK|MN 0.058 . EHI_177320 327 SKMNLSK|EI 0.069 . EHI_177320 337 LEDYASR|PD 0.079 . EHI_177320 340 YASRPDK|IS 0.297 . EHI_177320 359 AGMHAVR|KN 0.082 . EHI_177320 360 GMHAVRK|NR 0.109 . EHI_177320 362 HAVRKNR|YI 0.262 . EHI_177320 372 LPADFEK|AY 0.076 . EHI_177320 375 DFEKAYK|KV 0.071 . EHI_177320 376 FEKAYKK|VV 0.153 . EHI_177320 379 AYKKVVR|KQ 0.110 . EHI_177320 380 YKKVVRK|QT 0.108 . EHI_177320 389 QAMDFYR|-- 0.110 . ____________________________^_________________

  • Fasta :-

    >EHI_177320 ATGAGTGAAACAAAACATCAATTAAGAGACGCATATTTAAAAATGAAATCGCTTCAGGCA GACTTAGATCATTTGAGATTGATTGATGGATATATTCATGAAGAGCAACAAGCCCTTAGA CTAGAATTATCACGAGCACAAGAAGAAGTCAAAAGGGTTCAAAGTGTACCATTGCATATT GGTCAATTTGTTGAGATGGTAGACAAAGACACAGCTGTTGTTACTCTTTCTAGTGGAACA ACACAGTTTGTTCGTATTTTATCTACTATTAACAGAGAACTTCTTAAACCAGGAACATCT GTTGCACATCATAAACAATCAAACGCTTTAGTTGATGTATTACCACCAGAGGCTGATAGT GCCATTAGAATATTGTCCAAAGGAGAAACACCTAATGTAACATATGCTGATATTGGAGGG TGTGATATTCAAAAACAAGAAATTAGAGAAGCTGTAGAACTTCCATTAACTCAAAGTGAG TTGTATAAACAAATTGGTATTGATCCACCACGTGGTTGTTTGTTATATGGACCACCAGGA ACTGGAAAAACTATGTTAGCTAAAGCTGTTGCACATCATACCTCGGCATCTTTTATCCAA ATTGTTGGATCTGAATTTGCACAACAATATCTTGGAGAAGGTCCAAGAATGGTTAGAGAC GTTTTTAGATTAGCACGTGAAAATGCACCATCTATTGTATTTATTGATGAAGTTGATTCC ATTGCCACAAAACGTCATGACGCACAAAATGGAGCTGACCGAGAAGTTCAAAGAGTTTTA TTGGAGTTGTTAACTCAAATGGATGGGTTTGATCAAACAACTAATGTAAAAGTAATTATG GCAACAAATAGAGCTGACTCATTAGATCCAGCATTATTAAGACCTGGAAGACTTGATAGA AAAATTGAATTTCCATTACCAGACAGAAGGCAAAAGAGGTTAATCTTCCAAGTGCTTACA TCTAAAATGAACCTTTCTAAAGAAATTGACCTAGAAGATTATGCTTCACGTCCTGATAAA ATCAGTGGTGCAGAAATAGCTTCTATTTGTCAAGAAGCTGGTATGCATGCAGTAAGAAAG AATAGATATATTATCCTTCCAGCTGACTTTGAGAAGGCTTACAAGAAAGTTGTTAGAAAA CAAACACAAGCAATGGACTTTTACAGATAA
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  • Fasta :-

    MSETKHQLRDAYLKMKSLQADLDHLRLIDGYIHEEQQALRLELSRAQEEVKRVQSVPLHI GQFVEMVDKDTAVVTLSSGTTQFVRILSTINRELLKPGTSVAHHKQSNALVDVLPPEADS AIRILSKGETPNVTYADIGGCDIQKQEIREAVELPLTQSELYKQIGIDPPRGCLLYGPPG TGKTMLAKAVAHHTSASFIQIVGSEFAQQYLGEGPRMVRDVFRLARENAPSIVFIDEVDS IATKRHDAQNGADREVQRVLLELLTQMDGFDQTTNVKVIMATNRADSLDPALLRPGRLDR KIEFPLPDRRQKRLIFQVLTSKMNLSKEIDLEDYASRPDKISGAEIASICQEAGMHAVRK NRYIILPADFEKAYKKVVRKQTQAMDFYR

  • title: ATP binding site
  • coordinates: P178,P179,G180,T181,G182,K183,T184,M185,D236,N283
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
EHI_177320126 SIRILSKGET0.996unspEHI_177320287 SNRADSLDPA0.995unsp

EHI_177320      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India