• Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008236      

  • Computed_GO_Functions:  serine-type peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
EHI_182720SP0.0012390.9987490.000012CS pos: 17-18. LTA-DD. Pr: 0.4854
No Results
  • Fasta :-

    >EHI_182720 MISLLWLAIGIVSALTADDVLNKTSYVVAMTSDNNNYVYYIVKSVVNGIETNTLYQTSVQ NEGKYFIELAQGVGNELYYSVAHHSIFYTKCDGICSLYSLDSNMQEYQVTKDIAVSLPVI IKEHLYFVSPIFFGMTVQDSLDLQKKLANRKQTSHHVFTQTPFGEGSSYVTTNDDGTPQY KHLISSAITVDENGRIIVGQYTDVSNEVGNVISYDISDDESIVVFEAKSTASASDKKNYL KSSIYTISVGSDQATCISCNYPGNQIEPKATKTGKYIVFMRTTNTLEKNPAKYFVLYDLE DGSYRADVTLNEFTTEKYLIGKHSNEETITVFVINNRREALAVRKAVYSFESKAWNIEEV VVEGAVEMMAEVPCQDESSCLFIAQSFQYQPSEIYYCDEAMKLTKLTKLNDYTSYNLQKP ILVNPMGSLHDRIQSLLYLPSNNEKAPILLVVHEEEEGTVVDGFNKIMNPYVYTNEGYAV VMINSHVSKGFGERMRVKGSNDINVIIEDIQAVINELEKYPVDTSKIAVVGVFGASKIIT GLLDAKLPIVLAAVHAPILSIRSQYYTDAKYTLEYTFEGADYDNSYWYSHNDAMKNVASY NVPTLISYGDLDFVVDKSQPISLFQALQRRGIKSRLLRFPYSTNVLTKNEDIKVFYEQYI RWFNENMKN
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_182720.fa Sequence name : EHI_182720 Sequence length : 669 VALUES OF COMPUTED PARAMETERS Coef20 : 4.501 CoefTot : 0.885 ChDiff : -22 ZoneTo : 17 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.153 2.153 0.355 0.769 MesoH : -0.329 0.668 -0.322 0.304 MuHd_075 : 15.703 6.944 2.302 3.276 MuHd_095 : 14.012 11.459 3.631 1.789 MuHd_100 : 12.781 13.570 3.163 2.522 MuHd_105 : 6.222 14.144 1.760 2.790 Hmax_075 : 17.500 20.183 3.812 6.767 Hmax_095 : 17.500 21.200 3.745 6.370 Hmax_100 : 19.100 23.800 3.964 7.060 Hmax_105 : 19.400 24.500 4.464 7.360 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9666 0.0334 DFMC : 0.9409 0.0591
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 669 EHI_182720 MISLLWLAIGIVSALTADDVLNKTSYVVAMTSDNNNYVYYIVKSVVNGIETNTLYQTSVQNEGKYFIELAQGVGNELYYS 80 VAHHSIFYTKCDGICSLYSLDSNMQEYQVTKDIAVSLPVIIKEHLYFVSPIFFGMTVQDSLDLQKKLANRKQTSHHVFTQ 160 TPFGEGSSYVTTNDDGTPQYKHLISSAITVDENGRIIVGQYTDVSNEVGNVISYDISDDESIVVFEAKSTASASDKKNYL 240 KSSIYTISVGSDQATCISCNYPGNQIEPKATKTGKYIVFMRTTNTLEKNPAKYFVLYDLEDGSYRADVTLNEFTTEKYLI 320 GKHSNEETITVFVINNRREALAVRKAVYSFESKAWNIEEVVVEGAVEMMAEVPCQDESSCLFIAQSFQYQPSEIYYCDEA 400 MKLTKLTKLNDYTSYNLQKPILVNPMGSLHDRIQSLLYLPSNNEKAPILLVVHEEEEGTVVDGFNKIMNPYVYTNEGYAV 480 VMINSHVSKGFGERMRVKGSNDINVIIEDIQAVINELEKYPVDTSKIAVVGVFGASKIITGLLDAKLPIVLAAVHAPILS 560 IRSQYYTDAKYTLEYTFEGADYDNSYWYSHNDAMKNVASYNVPTLISYGDLDFVVDKSQPISLFQALQRRGIKSRLLRFP 640 YSTNVLTKNEDIKVFYEQYIRWFNENMKN 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ............................. 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_182720 23 ADDVLNK|TS 0.062 . EHI_182720 43 YVYYIVK|SV 0.101 . EHI_182720 64 SVQNEGK|YF 0.070 . EHI_182720 90 HSIFYTK|CD 0.068 . EHI_182720 111 QEYQVTK|DI 0.087 . EHI_182720 122 SLPVIIK|EH 0.053 . EHI_182720 145 DSLDLQK|KL 0.057 . EHI_182720 146 SLDLQKK|LA 0.132 . EHI_182720 150 QKKLANR|KQ 0.073 . EHI_182720 151 KKLANRK|QT 0.100 . EHI_182720 181 DGTPQYK|HL 0.065 . EHI_182720 195 TVDENGR|II 0.084 . EHI_182720 228 IVVFEAK|ST 0.085 . EHI_182720 236 TASASDK|KN 0.068 . EHI_182720 237 ASASDKK|NY 0.082 . EHI_182720 241 DKKNYLK|SS 0.074 . EHI_182720 269 GNQIEPK|AT 0.082 . EHI_182720 272 IEPKATK|TG 0.059 . EHI_182720 275 KATKTGK|YI 0.075 . EHI_182720 281 KYIVFMR|TT 0.111 . EHI_182720 288 TTNTLEK|NP 0.061 . EHI_182720 292 LEKNPAK|YF 0.063 . EHI_182720 305 LEDGSYR|AD 0.073 . EHI_182720 317 NEFTTEK|YL 0.065 . EHI_182720 322 EKYLIGK|HS 0.067 . EHI_182720 337 VFVINNR|RE 0.064 . EHI_182720 338 FVINNRR|EA 0.136 . EHI_182720 344 REALAVR|KA 0.093 . EHI_182720 345 EALAVRK|AV 0.097 . EHI_182720 353 VYSFESK|AW 0.073 . EHI_182720 402 YCDEAMK|LT 0.052 . EHI_182720 405 EAMKLTK|LT 0.059 . EHI_182720 408 KLTKLTK|LN 0.058 . EHI_182720 419 TSYNLQK|PI 0.076 . EHI_182720 432 MGSLHDR|IQ 0.093 . EHI_182720 445 LPSNNEK|AP 0.067 . EHI_182720 466 VVDGFNK|IM 0.058 . EHI_182720 489 INSHVSK|GF 0.104 . EHI_182720 494 SKGFGER|MR 0.089 . EHI_182720 496 GFGERMR|VK 0.092 . EHI_182720 498 GERMRVK|GS 0.078 . EHI_182720 519 VINELEK|YP 0.057 . EHI_182720 526 YPVDTSK|IA 0.079 . EHI_182720 537 GVFGASK|II 0.064 . EHI_182720 546 TGLLDAK|LP 0.056 . EHI_182720 562 APILSIR|SQ 0.106 . EHI_182720 570 QYYTDAK|YT 0.066 . EHI_182720 595 SHNDAMK|NV 0.079 . EHI_182720 617 LDFVVDK|SQ 0.086 . EHI_182720 629 LFQALQR|RG 0.078 . EHI_182720 630 FQALQRR|GI 0.143 . EHI_182720 633 LQRRGIK|SR 0.122 . EHI_182720 635 RRGIKSR|LL 0.101 . EHI_182720 638 IKSRLLR|FP 0.238 . EHI_182720 648 STNVLTK|NE 0.075 . EHI_182720 653 TKNEDIK|VF 0.066 . EHI_182720 661 FYEQYIR|WF 0.070 . EHI_182720 668 WFNENMK|N- 0.066 . ____________________________^_________________
  • Fasta :-

    >EHI_182720 ATGATTAGTTTATTGTGGCTTGCAATTGGCATCGTTAGTGCACTTACAGCAGATGATGTC TTGAATAAAACTAGTTATGTTGTTGCTATGACATCAGATAATAACAATTATGTTTATTAT ATTGTTAAATCAGTTGTTAATGGTATAGAAACAAATACATTATATCAAACAAGTGTTCAA AATGAAGGGAAATATTTCATTGAACTTGCTCAAGGAGTTGGAAATGAATTATACTACAGT GTTGCACATCATTCCATATTTTACACTAAATGTGATGGTATTTGTTCATTATATTCACTC GATTCAAATATGCAAGAGTATCAAGTAACTAAGGACATTGCTGTTTCATTACCTGTTATT ATTAAAGAACATCTTTATTTTGTTTCACCTATATTCTTTGGAATGACTGTTCAAGACTCA TTAGATCTTCAAAAGAAATTAGCAAATAGAAAACAAACTTCTCATCATGTTTTTACACAA ACACCATTTGGAGAAGGGTCATCTTATGTTACAACAAATGACGATGGTACTCCACAATAT AAACATTTAATTTCATCAGCAATTACTGTAGATGAAAATGGAAGAATTATTGTTGGACAA TATACAGATGTTTCAAATGAAGTAGGAAATGTTATTTCATATGATATTAGTGATGATGAA TCAATAGTTGTTTTTGAGGCTAAATCAACAGCATCAGCAAGTGATAAAAAGAATTATTTG AAATCATCAATCTATACAATTTCTGTTGGATCTGATCAAGCAACATGTATTTCATGTAAT TATCCTGGAAATCAAATTGAACCAAAAGCAACAAAAACAGGAAAGTATATTGTCTTTATG AGAACTACAAATACACTTGAGAAAAATCCAGCTAAGTATTTTGTTTTATATGATCTTGAA GATGGTTCATATAGAGCTGATGTTACTCTTAATGAATTTACTACAGAAAAGTATTTAATT GGTAAACATAGTAATGAGGAAACAATTACAGTATTTGTAATCAATAATAGAAGAGAGGCA TTAGCTGTAAGAAAAGCTGTATATTCATTTGAATCAAAGGCATGGAATATTGAAGAGGTT GTTGTTGAAGGAGCTGTAGAAATGATGGCTGAAGTTCCATGTCAAGATGAGAGTTCATGT TTATTCATTGCACAATCATTCCAATACCAACCAAGTGAAATTTATTATTGTGATGAAGCA ATGAAACTAACCAAATTAACCAAATTAAATGATTATACTTCTTATAACCTTCAAAAACCA ATTCTTGTTAATCCAATGGGATCATTACATGACAGAATTCAATCATTACTCTATCTTCCA TCAAATAATGAAAAGGCACCAATTCTTTTAGTTGTTCATGAAGAAGAAGAAGGAACTGTT GTTGATGGGTTTAATAAAATTATGAATCCATATGTTTATACAAATGAAGGATATGCTGTT GTAATGATTAACTCACATGTCAGTAAAGGATTTGGAGAACGTATGAGAGTTAAAGGGTCA AATGATATTAATGTTATTATTGAGGACATTCAAGCTGTTATCAATGAATTAGAAAAATAT CCAGTAGACACTTCTAAAATTGCAGTTGTTGGAGTTTTTGGAGCATCAAAAATTATTACT GGCTTATTAGATGCTAAATTACCCATTGTTTTAGCTGCAGTTCATGCACCAATTCTTTCA ATTCGATCACAATATTATACTGATGCCAAATATACATTAGAATATACATTTGAAGGAGCA GATTATGACAATTCTTATTGGTATAGTCATAATGATGCTATGAAAAATGTAGCATCATAT AATGTTCCAACACTTATTTCATATGGTGATCTTGATTTTGTTGTTGATAAATCACAACCA ATTTCATTATTCCAAGCATTACAACGTAGAGGAATCAAGTCTAGACTTCTTAGATTCCCA TATTCTACAAATGTATTAACAAAGAATGAAGATATTAAAGTGTTCTATGAACAATACATA CGATGGTTTAATGAGAATATGAAGAATTAA
  • Download Fasta
  • Fasta :-

    MISLLWLAIGIVSALTADDVLNKTSYVVAMTSDNNNYVYYIVKSVVNGIETNTLYQTSVQ NEGKYFIELAQGVGNELYYSVAHHSIFYTKCDGICSLYSLDSNMQEYQVTKDIAVSLPVI IKEHLYFVSPIFFGMTVQDSLDLQKKLANRKQTSHHVFTQTPFGEGSSYVTTNDDGTPQY KHLISSAITVDENGRIIVGQYTDVSNEVGNVISYDISDDESIVVFEAKSTASASDKKNYL KSSIYTISVGSDQATCISCNYPGNQIEPKATKTGKYIVFMRTTNTLEKNPAKYFVLYDLE DGSYRADVTLNEFTTEKYLIGKHSNEETITVFVINNRREALAVRKAVYSFESKAWNIEEV VVEGAVEMMAEVPCQDESSCLFIAQSFQYQPSEIYYCDEAMKLTKLTKLNDYTSYNLQKP ILVNPMGSLHDRIQSLLYLPSNNEKAPILLVVHEEEEGTVVDGFNKIMNPYVYTNEGYAV VMINSHVSKGFGERMRVKGSNDINVIIEDIQAVINELEKYPVDTSKIAVVGVFGASKIIT GLLDAKLPIVLAAVHAPILSIRSQYYTDAKYTLEYTFEGADYDNSYWYSHNDAMKNVASY NVPTLISYGDLDFVVDKSQPISLFQALQRRGIKSRLLRFPYSTNVLTKNEDIKVFYEQYI RWFNENMKN

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
EHI_182720232 SKSTASASDK0.994unspEHI_182720324 SIGKHSNEET0.994unsp

EHI_182720      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India