EHI_200230 | cell surface protease gp63, putative

_IDPredictionOTHERSPmTPCS_Position
EHI_200230SP0.0035270.9964580.000015CS pos: 15-16. AEC-IF. Pr: 0.4728
No Results

  • Fasta :-

    >EHI_200230 MLIVLLLISFTFAECIFSQIQQKTESPLYHPKRKLASDDSEWVPLNVKFDTNALNYGSGY VSTPPVCFVVSGTCTQDNLLTQEKKAYIIRIIDEVQRLIKKYFRVHKGTLATLKSSIKDK DRCGEISSIKDSSIADDIGMVMYVTAHPIESQTVLAYAASCGSAADASSTNPNNQKRNIF GYTNINPANLDVSEGKFRINAHTVLHETMHAMGFVSPTGMMSISKGRGTETVPVVTSEKV LKVAREHFGDNSISYVEFEDGGGSGTAGAHWEKRVLYNEIMTGTASSYSVISNFTLAYFE DLGTYSVNYSAAEPLTWGKGMKKDFFKCSNWPTQAPYYGETQARGCTPDRGAIGICDTSV RKDLPKIYQNYEDPTKGGMIELMDYCIHTTLVSGGQCYEKSVLSTENIASLSFLDRGSSY GKDSRCFSSSLMKYSIPISDFSCYRVKCVDRGYRVNVNGNWILCPSGDSISVTGYGGVIT CVNQSELCNGEVEEWPDIWRTDPVKGKAGSIVTLIGDYFSHMKKVYVGETEQTQFSIDNS NQVRVKIQFNDPFVNLIQLLSDGYVTVDIKIGDGNDINAVYQNFKLQVELVEVVQNVGQW LYKNLFFTVGIIIFLIFLVLLFGFIITKRIIYRRAKQVARNLV
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/EHI_200230.fa Sequence name : EHI_200230 Sequence length : 643 VALUES OF COMPUTED PARAMETERS Coef20 : 4.839 CoefTot : 0.741 ChDiff : -2 ZoneTo : 13 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.912 3.341 0.651 1.156 MesoH : -0.026 0.999 -0.243 0.451 MuHd_075 : 18.253 14.772 4.120 4.869 MuHd_095 : 12.399 8.769 3.819 2.538 MuHd_100 : 11.940 8.578 3.547 2.578 MuHd_105 : 9.535 7.731 3.603 2.341 Hmax_075 : 22.300 26.700 5.013 8.800 Hmax_095 : 20.700 24.200 5.655 7.130 Hmax_100 : 20.700 24.200 5.655 7.130 Hmax_105 : 21.000 23.567 5.302 8.073 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9296 0.0704 DFMC : 0.9600 0.0400
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 643 EHI_200230 MLIVLLLISFTFAECIFSQIQQKTESPLYHPKRKLASDDSEWVPLNVKFDTNALNYGSGYVSTPPVCFVVSGTCTQDNLL 80 TQEKKAYIIRIIDEVQRLIKKYFRVHKGTLATLKSSIKDKDRCGEISSIKDSSIADDIGMVMYVTAHPIESQTVLAYAAS 160 CGSAADASSTNPNNQKRNIFGYTNINPANLDVSEGKFRINAHTVLHETMHAMGFVSPTGMMSISKGRGTETVPVVTSEKV 240 LKVAREHFGDNSISYVEFEDGGGSGTAGAHWEKRVLYNEIMTGTASSYSVISNFTLAYFEDLGTYSVNYSAAEPLTWGKG 320 MKKDFFKCSNWPTQAPYYGETQARGCTPDRGAIGICDTSVRKDLPKIYQNYEDPTKGGMIELMDYCIHTTLVSGGQCYEK 400 SVLSTENIASLSFLDRGSSYGKDSRCFSSSLMKYSIPISDFSCYRVKCVDRGYRVNVNGNWILCPSGDSISVTGYGGVIT 480 CVNQSELCNGEVEEWPDIWRTDPVKGKAGSIVTLIGDYFSHMKKVYVGETEQTQFSIDNSNQVRVKIQFNDPFVNLIQLL 560 SDGYVTVDIKIGDGNDINAVYQNFKLQVELVEVVQNVGQWLYKNLFFTVGIIIFLIFLVLLFGFIITKRIIYRRAKQVAR 640 NLV 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ EHI_200230 23 FSQIQQK|TE 0.065 . EHI_200230 32 SPLYHPK|RK 0.066 . EHI_200230 33 PLYHPKR|KL 0.157 . EHI_200230 34 LYHPKRK|LA 0.122 . EHI_200230 48 WVPLNVK|FD 0.059 . EHI_200230 84 NLLTQEK|KA 0.064 . EHI_200230 85 LLTQEKK|AY 0.095 . EHI_200230 90 KKAYIIR|II 0.140 . EHI_200230 97 IIDEVQR|LI 0.089 . EHI_200230 100 EVQRLIK|KY 0.113 . EHI_200230 101 VQRLIKK|YF 0.097 . EHI_200230 104 LIKKYFR|VH 0.083 . EHI_200230 107 KYFRVHK|GT 0.163 . EHI_200230 114 GTLATLK|SS 0.070 . EHI_200230 118 TLKSSIK|DK 0.081 . EHI_200230 120 KSSIKDK|DR 0.110 . EHI_200230 122 SIKDKDR|CG 0.089 . EHI_200230 130 GEISSIK|DS 0.083 . EHI_200230 176 TNPNNQK|RN 0.063 . EHI_200230 177 NPNNQKR|NI 0.315 . EHI_200230 196 LDVSEGK|FR 0.069 . EHI_200230 198 VSEGKFR|IN 0.090 . EHI_200230 225 GMMSISK|GR 0.071 . EHI_200230 227 MSISKGR|GT 0.156 . EHI_200230 239 PVVTSEK|VL 0.062 . EHI_200230 242 TSEKVLK|VA 0.076 . EHI_200230 245 KVLKVAR|EH 0.083 . EHI_200230 273 AGAHWEK|RV 0.073 . EHI_200230 274 GAHWEKR|VL 0.274 . EHI_200230 319 EPLTWGK|GM 0.059 . EHI_200230 322 TWGKGMK|KD 0.065 . EHI_200230 323 WGKGMKK|DF 0.113 . EHI_200230 327 MKKDFFK|CS 0.068 . EHI_200230 344 YGETQAR|GC 0.116 . EHI_200230 350 RGCTPDR|GA 0.125 . EHI_200230 361 ICDTSVR|KD 0.077 . EHI_200230 362 CDTSVRK|DL 0.088 . EHI_200230 366 VRKDLPK|IY 0.072 . EHI_200230 376 NYEDPTK|GG 0.064 . EHI_200230 400 GGQCYEK|SV 0.100 . EHI_200230 416 SLSFLDR|GS 0.154 . EHI_200230 422 RGSSYGK|DS 0.069 . EHI_200230 425 SYGKDSR|CF 0.097 . EHI_200230 433 FSSSLMK|YS 0.083 . EHI_200230 445 SDFSCYR|VK 0.075 . EHI_200230 447 FSCYRVK|CV 0.089 . EHI_200230 451 RVKCVDR|GY 0.101 . EHI_200230 454 CVDRGYR|VN 0.146 . EHI_200230 500 EWPDIWR|TD 0.072 . EHI_200230 505 WRTDPVK|GK 0.072 . EHI_200230 507 TDPVKGK|AG 0.077 . EHI_200230 523 DYFSHMK|KV 0.083 . EHI_200230 524 YFSHMKK|VY 0.104 . EHI_200230 544 DNSNQVR|VK 0.099 . EHI_200230 546 SNQVRVK|IQ 0.065 . EHI_200230 570 YVTVDIK|IG 0.054 . EHI_200230 585 AVYQNFK|LQ 0.057 . EHI_200230 603 VGQWLYK|NL 0.063 . EHI_200230 628 FGFIITK|RI 0.056 . EHI_200230 629 GFIITKR|II 0.151 . EHI_200230 633 TKRIIYR|RA 0.133 . EHI_200230 634 KRIIYRR|AK 0.171 . EHI_200230 636 IIYRRAK|QV 0.226 . EHI_200230 640 RAKQVAR|NL 0.099 . ____________________________^_________________

  • Fasta :-

    >EHI_200230 ATGTTGATTGTATTACTACTCATCTCATTTACATTCGCTGAATGTATCTTTTCTCAAATA CAACAAAAAACAGAAAGTCCATTGTATCATCCAAAAAGAAAATTAGCAAGTGATGACTCT GAATGGGTTCCATTAAATGTTAAGTTTGATACTAATGCATTAAATTATGGTAGTGGATAT GTAAGTACTCCACCTGTTTGTTTTGTTGTATCAGGAACCTGTACACAAGATAATTTGTTA ACACAAGAGAAAAAGGCATATATTATAAGAATTATAGACGAAGTACAACGTTTAATTAAG AAATATTTTAGAGTACATAAAGGAACGTTAGCCACATTAAAATCAAGTATAAAAGATAAA GATAGATGTGGAGAAATTTCTAGTATAAAAGATAGCTCAATTGCTGATGATATTGGAATG GTAATGTATGTTACGGCACATCCTATTGAATCACAAACTGTATTAGCTTATGCTGCATCA TGTGGAAGTGCTGCTGATGCAAGCTCTACTAATCCAAATAATCAGAAACGAAATATTTTT GGTTATACAAATATTAATCCAGCAAATTTAGATGTTAGTGAAGGAAAATTCAGAATCAAT GCCCATACTGTCCTTCATGAAACAATGCATGCAATGGGATTTGTATCACCTACTGGTATG ATGTCTATTTCTAAAGGAAGAGGAACAGAGACAGTACCTGTTGTTACCAGTGAAAAAGTT CTTAAAGTTGCTCGAGAACATTTTGGTGATAATTCAATTTCATATGTAGAGTTTGAGGAT GGTGGAGGAAGTGGAACTGCAGGAGCTCATTGGGAAAAAAGAGTTCTTTATAATGAAATT ATGACAGGAACAGCATCATCTTATTCAGTCATTTCTAATTTCACATTGGCATATTTTGAA GACCTAGGAACTTATTCAGTTAATTATAGTGCTGCTGAACCATTAACATGGGGTAAAGGT ATGAAAAAAGATTTTTTCAAATGTTCTAATTGGCCAACACAAGCGCCATATTATGGTGAG ACTCAAGCAAGGGGATGTACTCCTGATAGAGGAGCCATTGGAATTTGTGATACTTCTGTT CGTAAAGATTTGCCTAAAATTTATCAAAATTATGAAGACCCAACTAAAGGAGGGATGATT GAATTAATGGATTATTGTATTCACACAACATTAGTTTCAGGAGGTCAATGTTATGAAAAG AGTGTATTATCAACAGAAAATATTGCCTCATTATCATTCCTTGATAGAGGAAGTTCATAT GGAAAAGATTCAAGATGTTTTTCATCTAGTTTAATGAAATATTCTATTCCAATTAGTGAC TTTAGTTGTTATAGAGTAAAATGTGTAGACCGAGGATATAGAGTTAATGTTAATGGAAAT TGGATTCTTTGTCCATCAGGAGATAGTATTAGTGTTACTGGATATGGTGGAGTAATTACA TGTGTGAATCAAAGTGAATTATGTAATGGCGAAGTAGAAGAATGGCCAGATATATGGAGG ACAGACCCAGTAAAAGGAAAAGCAGGGTCTATAGTAACATTAATTGGTGATTATTTCAGT CACATGAAAAAAGTATATGTTGGAGAAACAGAACAAACACAATTTTCTATTGATAATTCC AATCAAGTCAGAGTAAAAATTCAGTTTAATGATCCTTTTGTTAATCTTATTCAACTTCTT TCTGATGGTTATGTTACAGTAGATATTAAAATTGGAGATGGAAATGATATAAATGCAGTA TATCAAAATTTTAAATTACAAGTTGAATTAGTTGAAGTAGTACAAAATGTTGGTCAATGG TTATATAAAAATCTCTTCTTTACAGTTGGTATTATTATCTTCCTTATCTTCTTAGTGTTA TTATTTGGTTTTATCATTACAAAAAGAATCATTTATAGAAGAGCAAAACAAGTTGCAAGA AATCTTGTTTAA
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  • Fasta :-

    MLIVLLLISFTFAECIFSQIQQKTESPLYHPKRKLASDDSEWVPLNVKFDTNALNYGSGY VSTPPVCFVVSGTCTQDNLLTQEKKAYIIRIIDEVQRLIKKYFRVHKGTLATLKSSIKDK DRCGEISSIKDSSIADDIGMVMYVTAHPIESQTVLAYAASCGSAADASSTNPNNQKRNIF GYTNINPANLDVSEGKFRINAHTVLHETMHAMGFVSPTGMMSISKGRGTETVPVVTSEKV LKVAREHFGDNSISYVEFEDGGGSGTAGAHWEKRVLYNEIMTGTASSYSVISNFTLAYFE DLGTYSVNYSAAEPLTWGKGMKKDFFKCSNWPTQAPYYGETQARGCTPDRGAIGICDTSV RKDLPKIYQNYEDPTKGGMIELMDYCIHTTLVSGGQCYEKSVLSTENIASLSFLDRGSSY GKDSRCFSSSLMKYSIPISDFSCYRVKCVDRGYRVNVNGNWILCPSGDSISVTGYGGVIT CVNQSELCNGEVEEWPDIWRTDPVKGKAGSIVTLIGDYFSHMKKVYVGETEQTQFSIDNS NQVRVKIQFNDPFVNLIQLLSDGYVTVDIKIGDGNDINAVYQNFKLQVELVEVVQNVGQW LYKNLFFTVGIIIFLIFLVLLFGFIITKRIIYRRAKQVARNLV

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
EHI_200230404 SKSVLSTENI0.991unspEHI_200230404 SKSVLSTENI0.991unspEHI_200230404 SKSVLSTENI0.991unspEHI_200230116 STLKSSIKDK0.997unspEHI_200230133 SIKDSSIADD0.991unsp

EHI_200230      



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India