ETH_00000555 | hypothetical protein

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  • Fasta :-

    >ETH_00000555 MHLRNGRVIGPTPRETSTMSVNKMPSGTPAHHRHATPKPTVAERPHGHKEAPPQVIPMTN VMPGDSPFVTWDQFQSAASVIRTVIGGTVESGATIPILPEDGSNMQAFLLRIECRYTQVG LEPRE
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00000555.fa Sequence name : ETH_00000555 Sequence length : 125 VALUES OF COMPUTED PARAMETERS Coef20 : 3.963 CoefTot : -2.530 ChDiff : 1 ZoneTo : 42 KR : 6 DE : 1 CleavSite : 35 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.029 0.982 0.118 0.514 MesoH : -0.395 0.149 -0.342 0.202 MuHd_075 : 30.914 18.112 8.946 6.693 MuHd_095 : 38.716 19.762 9.932 7.260 MuHd_100 : 34.495 12.625 7.365 6.641 MuHd_105 : 39.398 15.865 8.217 8.453 Hmax_075 : 3.733 2.567 -1.755 2.543 Hmax_095 : 11.300 7.000 1.299 3.380 Hmax_100 : 8.700 2.800 1.225 3.220 Hmax_105 : 11.900 6.700 1.261 3.510 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.0743 0.9257 DFMC : 0.2133 0.7867 This protein is probably imported in mitochondria. f(Ser) = 0.0714 f(Arg) = 0.0952 CMi = 0.35129 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 125 ETH_00000555 MHLRNGRVIGPTPRETSTMSVNKMPSGTPAHHRHATPKPTVAERPHGHKEAPPQVIPMTNVMPGDSPFVTWDQFQSAASV 80 IRTVIGGTVESGATIPILPEDGSNMQAFLLRIECRYTQVGLEPRE 160 ................................................................................ 80 ............................................. 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00000555 4 ---MHLR|NG 0.099 . ETH_00000555 7 MHLRNGR|VI 0.264 . ETH_00000555 14 VIGPTPR|ET 0.092 . ETH_00000555 23 STMSVNK|MP 0.073 . ETH_00000555 33 GTPAHHR|HA 0.144 . ETH_00000555 38 HRHATPK|PT 0.108 . ETH_00000555 44 KPTVAER|PH 0.118 . ETH_00000555 49 ERPHGHK|EA 0.070 . ETH_00000555 82 SAASVIR|TV 0.167 . ETH_00000555 111 MQAFLLR|IE 0.085 . ETH_00000555 115 LLRIECR|YT 0.131 . ETH_00000555 124 QVGLEPR|E- 0.085 . ____________________________^_________________

  • Fasta :-

    >ETH_00000555 ATGCATCTCCGCAACGGACGCGTTATCGGCCCCACACCGCGGGAGACTTCTACAATGTCA GTGAACAAAATGCCGAGCGGGACGCCGGCCCATCATCGTCATGCTACTCCGAAGCCCACC GTGGCAGAGCGGCCGCATGGGCATAAGGAGGCGCCCCCGCAGGTGATACCTATGACCAAC GTTATGCCAGGGGACAGTCCCTTCGTCACGTGGGACCAATTCCAGTCCGCTGCCAGTGTG ATAAGAACTGTTATAGGGGGGACCGTGGAATCCGGCGCAACGATTCCCATACTACCAGAA GATGGCAGCAATATGCAGGCCTTTCTGCTGCGCATCGAGTGCCGGTACACCCAGGTGGGA TTGGAGCCGCGCGAGTAG
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  • Fasta :-

    No Results
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IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_0000055579 SQSAASVIRT0.995unspETH_0000055579 SQSAASVIRT0.995unspETH_0000055579 SQSAASVIRT0.995unspETH_0000055512 TVIGPTPRET0.991unspETH_0000055536 THRHATPKPT0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India