ETH_00000700 | hypothetical protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0003676      GO:0008270      

  • Computed_GO_Functions:  nucleic acid binding      zinc ion binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

No Results
No Results

  • Fasta :-

    >ETH_00000700 MSVNKMPSGTPAHHRHATPEPTVAERPHGHKEAPPQVIPMTNVMPGDSPFVTWDQFQSAM SVIRTVIGGAVESGATIPLLPEDGSTMQAFLLRIERRYTQMGLEPREWGNAIIDHLVGPA LTYWMYLRRTINLSDWATVQRRLLERFDKTMPQSQLLTELDKVRWNGNPKEYTDWFGAVA ERGLGVAPDELADYYCTGLPTDLHLLITNNGQVKYQSWEQATTAAARLYEPKQSVLEVRE RTSRAIRAAIQAKGPHRRQEIENRPGETHANCCECQGRGLPARVCPSKGESTKRPGEICK KCGGVGHHARDCPTYERGRPEPEDKSRREPTRPITEKTERLNRAA
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00000700.fa Sequence name : ETH_00000700 Sequence length : 345 VALUES OF COMPUTED PARAMETERS Coef20 : 3.137 CoefTot : -1.332 ChDiff : 5 ZoneTo : 19 KR : 2 DE : 0 CleavSite : 17 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.035 1.088 0.119 0.568 MesoH : -0.334 0.189 -0.359 0.215 MuHd_075 : 24.569 14.998 6.806 5.400 MuHd_095 : 18.520 8.953 4.007 3.181 MuHd_100 : 23.042 12.625 4.774 4.834 MuHd_105 : 22.030 12.077 4.039 5.290 Hmax_075 : 4.400 1.500 -1.493 1.830 Hmax_095 : 6.475 0.787 -1.576 1.575 Hmax_100 : 7.400 2.800 -1.107 2.210 Hmax_105 : 6.533 2.800 -1.866 2.368 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8052 0.1948 DFMC : 0.8063 0.1937
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 345 ETH_00000700 MSVNKMPSGTPAHHRHATPEPTVAERPHGHKEAPPQVIPMTNVMPGDSPFVTWDQFQSAMSVIRTVIGGAVESGATIPLL 80 PEDGSTMQAFLLRIERRYTQMGLEPREWGNAIIDHLVGPALTYWMYLRRTINLSDWATVQRRLLERFDKTMPQSQLLTEL 160 DKVRWNGNPKEYTDWFGAVAERGLGVAPDELADYYCTGLPTDLHLLITNNGQVKYQSWEQATTAAARLYEPKQSVLEVRE 240 RTSRAIRAAIQAKGPHRRQEIENRPGETHANCCECQGRGLPARVCPSKGESTKRPGEICKKCGGVGHHARDCPTYERGRP 320 EPEDKSRREPTRPITEKTERLNRAA 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ......................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00000700 5 --MSVNK|MP 0.067 . ETH_00000700 15 GTPAHHR|HA 0.142 . ETH_00000700 26 EPTVAER|PH 0.104 . ETH_00000700 31 ERPHGHK|EA 0.070 . ETH_00000700 64 SAMSVIR|TV 0.147 . ETH_00000700 93 MQAFLLR|IE 0.090 . ETH_00000700 96 FLLRIER|RY 0.153 . ETH_00000700 97 LLRIERR|YT 0.221 . ETH_00000700 106 QMGLEPR|EW 0.114 . ETH_00000700 128 TYWMYLR|RT 0.077 . ETH_00000700 129 YWMYLRR|TI 0.117 . ETH_00000700 141 DWATVQR|RL 0.076 . ETH_00000700 142 WATVQRR|LL 0.142 . ETH_00000700 146 QRRLLER|FD 0.114 . ETH_00000700 149 LLERFDK|TM 0.119 . ETH_00000700 162 LLTELDK|VR 0.058 . ETH_00000700 164 TELDKVR|WN 0.095 . ETH_00000700 170 RWNGNPK|EY 0.072 . ETH_00000700 182 FGAVAER|GL 0.124 . ETH_00000700 214 TNNGQVK|YQ 0.094 . ETH_00000700 227 ATTAAAR|LY 0.101 . ETH_00000700 232 ARLYEPK|QS 0.064 . ETH_00000700 239 QSVLEVR|ER 0.071 . ETH_00000700 241 VLEVRER|TS 0.093 . ETH_00000700 244 VRERTSR|AI 0.334 . ETH_00000700 247 RTSRAIR|AA 0.465 . ETH_00000700 253 RAAIQAK|GP 0.080 . ETH_00000700 257 QAKGPHR|RQ 0.084 . ETH_00000700 258 AKGPHRR|QE 0.198 . ETH_00000700 264 RQEIENR|PG 0.095 . ETH_00000700 278 CCECQGR|GL 0.089 . ETH_00000700 283 GRGLPAR|VC 0.109 . ETH_00000700 288 ARVCPSK|GE 0.093 . ETH_00000700 293 SKGESTK|RP 0.069 . ETH_00000700 294 KGESTKR|PG 0.170 . ETH_00000700 300 RPGEICK|KC 0.092 . ETH_00000700 301 PGEICKK|CG 0.100 . ETH_00000700 310 GVGHHAR|DC 0.193 . ETH_00000700 317 DCPTYER|GR 0.066 . ETH_00000700 319 PTYERGR|PE 0.064 . ETH_00000700 325 RPEPEDK|SR 0.072 . ETH_00000700 327 EPEDKSR|RE 0.084 . ETH_00000700 328 PEDKSRR|EP 0.105 . ETH_00000700 332 SRREPTR|PI 0.145 . ETH_00000700 337 TRPITEK|TE 0.066 . ETH_00000700 340 ITEKTER|LN 0.090 . ETH_00000700 343 KTERLNR|AA 0.292 . ____________________________^_________________

  • Fasta :-

    >ETH_00000700 ATGTCAGTGAACAAAATGCCGAGCGGGACACCAGCCCATCATCGTCATGCTACTCCGGAG CCCACCGTGGCAGAGCGGCCGCATGGGCATAAGGAGGCGCCCCCGCAGGTGATACCTATG ACCAATGTTATGCCAGGGGACAGTCCCTTCGTCACGTGGGACCAATTCCAGTCCGCTATG AGTGTGATAAGAACTGTTATAGGGGGGGCAGTCGAGTCGGGCGCAACGATTCCCCTACTA CCAGAAGACGGCAGCACTATGCAGGCCTTTCTGCTGCGCATCGAGCGCCGGTACACCCAG ATGGGATTGGAACCGCGCGAGTGGGGAAATGCAATTATTGACCACCTTGTGGGCCCGGCC CTAACGTATTGGATGTATCTACGGAGAACTATCAACCTAAGCGACTGGGCGACCGTACAG CGCAGGCTTCTGGAGCGGTTTGACAAAACAATGCCGCAGAGTCAATTGTTAACGGAGCTG GATAAAGTACGGTGGAATGGTAACCCGAAGGAATACACGGACTGGTTTGGGGCTGTAGCT GAGCGTGGTTTGGGTGTTGCCCCCGACGAACTCGCTGACTATTACTGCACCGGGCTACCG ACAGACCTCCATCTTCTAATCACCAATAACGGGCAGGTGAAATATCAGTCGTGGGAACAA GCAACGACAGCCGCAGCACGTCTCTACGAGCCCAAGCAGAGTGTGCTGGAAGTCCGGGAA AGGACCAGTCGAGCCATTAGGGCTGCTATCCAAGCCAAAGGACCCCATCGGCGCCAGGAA ATTGAAAATCGACCTGGGGAAACCCACGCGAACTGCTGTGAGTGTCAGGGTCGCGGACTT CCGGCACGTGTCTGCCCCAGCAAAGGGGAAAGTACCAAACGTCCGGGAGAAATATGCAAG AAGTGTGGCGGTGTGGGACACCATGCTCGGGACTGTCCTACGTATGAACGAGGCCGGCCC GAGCCGGAGGACAAGAGCAGGAGGGAGCCCACCCGTCCTATCACTGAGAAGACGGAACGG TTAAACAGGGCAGCCTAG
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  • Fasta :-

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_00000700291 SSKGESTKRP0.996unspETH_00000700291 SSKGESTKRP0.996unspETH_00000700291 SSKGESTKRP0.996unspETH_00000700326 SPEDKSRREP0.996unspETH_0000070018 THRHATPEPT0.993unspETH_0000070061 SQSAMSVIRT0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India