ETH_00000830 | proteasome component PRE3 precursor, putative

_IDPredictionOTHERSPmTPCS_Position
ETH_00000830OTHER0.9996550.0003360.000009
No Results

  • Fasta :-

    >ETH_00000830 MAQVVLDSDGLPTLSFPTADPCTAAAAASAAAAEVKTGTTIVACCYSDGVVLGADTRTSA GSYVVNRAARKITKLADRICVCRSGSAADTQTLAQIVRLHLELYTQQLPPQFNREAQVRV AAHLLQRLAYEYKDMLTAGLIVGGWDSQRGPQVYSVPLGGCCVPVPYTAGGSGSMFITAY LDEHYRPDMTKEETVNLVKRAVSHAIHRDGSSGGMIRLVTISKDEMEEMYVEGNRLPGGW GGRQGDAHGAAAAAEAAAIVGACKEPATEKRWGCSSSDEG
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00000830.fa Sequence name : ETH_00000830 Sequence length : 280 VALUES OF COMPUTED PARAMETERS Coef20 : 3.602 CoefTot : 0.108 ChDiff : -4 ZoneTo : 6 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.488 1.276 0.337 0.518 MesoH : -0.256 0.462 -0.150 0.213 MuHd_075 : 17.705 18.521 5.467 4.834 MuHd_095 : 8.056 4.668 1.633 1.831 MuHd_100 : 10.567 7.081 2.519 1.571 MuHd_105 : 13.096 9.296 3.363 1.669 Hmax_075 : 15.400 14.583 2.501 4.947 Hmax_095 : 13.500 9.900 1.316 3.800 Hmax_100 : 13.300 10.900 1.512 3.800 Hmax_105 : 5.133 8.750 -0.402 3.780 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9686 0.0314 DFMC : 0.9342 0.0658
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 280 ETH_00000830 MAQVVLDSDGLPTLSFPTADPCTAAAAASAAAAEVKTGTTIVACCYSDGVVLGADTRTSAGSYVVNRAARKITKLADRIC 80 VCRSGSAADTQTLAQIVRLHLELYTQQLPPQFNREAQVRVAAHLLQRLAYEYKDMLTAGLIVGGWDSQRGPQVYSVPLGG 160 CCVPVPYTAGGSGSMFITAYLDEHYRPDMTKEETVNLVKRAVSHAIHRDGSSGGMIRLVTISKDEMEEMYVEGNRLPGGW 240 GGRQGDAHGAAAAAEAAAIVGACKEPATEKRWGCSSSDEG 320 ................................................................................ 80 ................................................................................ 160 .......................................P........................................ 240 ........................................ 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ ETH_00000830 36 AAAAEVK|TG 0.068 . ETH_00000830 57 VLGADTR|TS 0.071 . ETH_00000830 67 GSYVVNR|AA 0.156 . ETH_00000830 70 VVNRAAR|KI 0.336 . ETH_00000830 71 VNRAARK|IT 0.079 . ETH_00000830 74 AARKITK|LA 0.073 . ETH_00000830 78 ITKLADR|IC 0.065 . ETH_00000830 83 DRICVCR|SG 0.174 . ETH_00000830 98 TLAQIVR|LH 0.077 . ETH_00000830 114 LPPQFNR|EA 0.101 . ETH_00000830 119 NREAQVR|VA 0.111 . ETH_00000830 127 AAHLLQR|LA 0.100 . ETH_00000830 133 RLAYEYK|DM 0.078 . ETH_00000830 149 GGWDSQR|GP 0.077 . ETH_00000830 186 YLDEHYR|PD 0.103 . ETH_00000830 191 YRPDMTK|EE 0.063 . ETH_00000830 199 ETVNLVK|RA 0.055 . ETH_00000830 200 TVNLVKR|AV 0.513 *ProP* ETH_00000830 208 VSHAIHR|DG 0.134 . ETH_00000830 217 SSGGMIR|LV 0.132 . ETH_00000830 223 RLVTISK|DE 0.066 . ETH_00000830 235 MYVEGNR|LP 0.079 . ETH_00000830 243 PGGWGGR|QG 0.093 . ETH_00000830 264 AIVGACK|EP 0.061 . ETH_00000830 270 KEPATEK|RW 0.062 . ETH_00000830 271 EPATEKR|WG 0.202 . ____________________________^_________________

  • Fasta :-

    >ETH_00000830 ATGGCTCAGGTTGTACTCGACAGCGACGGGCTTCCTACCCTGTCTTTTCCCACTGCCGAT CCCTGCACCGCAGCAGCCGCAGCTAGCGCCGCAGCAGCAGAGGTGAAGACGGGCACGACT ATCGTGGCTTGCTGTTACTCTGATGGCGTGGTGCTGGGCGCGGACACGCGCACATCAGCT GGCTCTTATGTAGTGAACAGAGCTGCGCGGAAGATAACGAAACTGGCGGATAGGATCTGC GTGTGCCGCAGTGGAAGTGCTGCCGATACCCAGACGTTGGCGCAGATAGTGCGGCTGCAC CTGGAGCTGTACACGCAGCAGCTGCCTCCCCAGTTCAACAGGGAGGCCCAGGTGCGCGTT GCTGCCCACCTGCTGCAGAGGCTCGCCTACGAGTACAAGGACATGCTGACCGCCGGCCTT ATAGTGGGTGGCTGGGACAGCCAGCGGGGCCCCCAGGTATACTCAGTGCCATTGGGCGGC TGCTGCGTCCCTGTCCCATACACGGCTGGGGGCTCGGGCTCTATGTTCATTACGGCCTAC CTGGATGAGCACTACCGCCCCGATATGACGAAGGAAGAGACCGTCAATTTAGTGAAGAGG GCAGTCTCACACGCAATTCACAGAGATGGCAGCTCAGGGGGAATGATAAGGCTCGTGACC ATCAGCAAGGATGAGATGGAGGAGATGTATGTAGAGGGAAACAGACTACCTGGTGGCTGG GGAGGGCGTCAAGGTGACGCGCATGGAGCTGCAGCAGCTGCTGAAGCAGCAGCAATTGTT GGCGCTTGCAAGGAACCAGCAACAGAGAAGCGGTGGGGCTGTAGCAGTTCTGACGAGGGG TAG
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  • Fasta :-

    MAQVVLDSDGLPTLSFPTADPCTAAAAASAAAAEVKTGTTIVACCYSDGVVLGADTRTSA GSYVVNRAARKITKLADRICVCRSGSAADTQTLAQIVRLHLELYTQQLPPQFNREAQVRV AAHLLQRLAYEYKDMLTAGLIVGGWDSQRGPQVYSVPLGGCCVPVPYTAGGSGSMFITAY LDEHYRPDMTKEETVNLVKRAVSHAIHRDGSSGGMIRLVTISKDEMEEMYVEGNRLPGGW GGRQGDAHGAAAAAEAAAIVGACKEPATEKRWGCSSSDEG

  • title: active site
  • coordinates: T39,D55,R57,K71,S172,D209,S212,G213
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India