ETH_00001105 | hypothetical protein

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  • Fasta :-

    >ETH_00001105 MICAVAAGPNVIPVSPEWENQLLNSVEGTNTSEKDAETTQSEK
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00001105.fa Sequence name : ETH_00001105 Sequence length : 43 VALUES OF COMPUTED PARAMETERS Coef20 : 3.484 CoefTot : -0.608 ChDiff : -5 ZoneTo : 16 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.718 1.082 0.065 0.482 MesoH : -1.370 -1.370 -1.370 -1.370 MuHd_075 : 3.549 8.156 1.668 1.625 MuHd_095 : 12.882 6.913 4.572 1.129 MuHd_100 : 18.003 9.451 3.828 2.929 MuHd_105 : 20.226 12.922 4.041 4.362 Hmax_075 : 9.683 12.400 1.843 4.520 Hmax_095 : 12.900 13.600 4.073 4.515 Hmax_100 : 14.900 15.400 2.857 5.260 Hmax_105 : 14.700 13.767 2.389 5.553 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9986 0.0014 DFMC : 0.9979 0.0021
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 43 ETH_00001105 MICAVAAGPNVIPVSPEWENQLLNSVEGTNTSEKDAETTQSEK 80 ........................................... 80 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00001105 34 GTNTSEK|DA 0.102 . ETH_00001105 43 ETTQSEK|-- 0.059 . ____________________________^_________________

  • Fasta :-

    >ETH_00001105 ATGATATGTGCGGTAGCAGCAGGCCCTAATGTCATTCCAGTCTCGCCTGAGTGGGAAAAC CAACTCCTCAACAGTGTGGAGGGAACTAATACGAGCGAAAAGGACGCGGAAACGACTCAG AGTGAAAAGTAG
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  • Fasta :-

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IDSitePeptideScoreMethod
ETH_0000110532 SGTNTSEKDA0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India