ETH_00001365 | hypothetical protein

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  • Fasta :-

    >ETH_00001365 MICAVATGPNATPVSLEWGNQLLSTAEESNTSGGHAEGAHPLLETRWKSGSASILSEEAP GATTDSSRKSAEATEDGYGSDATEIVPHWWRETCTKEPYNQGEALCYVGATAVLRVELAG SPCEALLDTGA
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00001365.fa Sequence name : ETH_00001365 Sequence length : 131 VALUES OF COMPUTED PARAMETERS Coef20 : 3.720 CoefTot : -0.233 ChDiff : -12 ZoneTo : 16 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.700 1.347 0.092 0.429 MesoH : -0.882 -0.355 -0.497 0.066 MuHd_075 : 5.307 9.068 1.173 0.741 MuHd_095 : 11.926 2.853 3.676 0.958 MuHd_100 : 16.780 7.106 3.167 2.293 MuHd_105 : 18.251 8.855 3.654 3.317 Hmax_075 : 9.683 9.100 1.177 4.515 Hmax_095 : 13.200 9.800 2.215 4.010 Hmax_100 : 13.900 11.700 2.077 4.790 Hmax_105 : 13.300 14.000 3.226 5.005 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9977 0.0023 DFMC : 0.9966 0.0034
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 131 ETH_00001365 MICAVATGPNATPVSLEWGNQLLSTAEESNTSGGHAEGAHPLLETRWKSGSASILSEEAPGATTDSSRKSAEATEDGYGS 80 DATEIVPHWWRETCTKEPYNQGEALCYVGATAVLRVELAGSPCEALLDTGA 160 ................................................................................ 80 ................................................... 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00001365 46 HPLLETR|WK 0.089 . ETH_00001365 48 LLETRWK|SG 0.104 . ETH_00001365 68 ATTDSSR|KS 0.086 . ETH_00001365 69 TTDSSRK|SA 0.206 . ETH_00001365 91 IVPHWWR|ET 0.113 . ETH_00001365 96 WRETCTK|EP 0.071 . ETH_00001365 115 GATAVLR|VE 0.073 . ____________________________^_________________

  • Fasta :-

    >ETH_00001365 ATGATTTGTGCAGTAGCAACTGGCCCTAATGCCACTCCAGTCTCCCTTGAGTGGGGAAAC CAACTCCTCAGCACTGCGGAAGAAAGTAATACGAGTGGTGGGCACGCGGAAGGGGCTCAT CCGCTTTTGGAAACGCGGTGGAAGTCTGGGTCGGCGTCGATCCTGAGTGAAGAGGCTCCG GGAGCGACGACGGATAGCAGCAGGAAGTCTGCAGAGGCAACAGAAGACGGCTATGGATCA GACGCGACAGAGATTGTGCCACACTGGTGGAGGGAAACTTGCACGAAAGAGCCTTACAAC CAAGGGGAAGCATTGTGTTATGTGGGTGCGACGGCGGTACTTCGTGTTGAGCTCGCAGGG AGTCCCTGTGAGGCCCTCTTGGACACTGGGGCTTGA
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  • Fasta :-

    No Results
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IDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_0000136567 STTDSSRKSA0.995unspETH_0000136570 SSSRKSAEAT0.998unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India