ETH_00001580 | hypothetical protein, conserved

_IDPredictionOTHERSPmTPCS_Position
ETH_00001580SP0.0137660.9669150.019319CS pos: 27-28. TNA-VR. Pr: 0.4214
No Results

  • Fasta :-

    >ETH_00001580 MMGGPLLQATWLILLASAALSHLGTNAVRRFAQLEQRAMGAPAAGPRANSFEDSSNGGAP VYALPDFYHSYASMKKELRDLGKSCGLSVHQAALGGVTVEYFHLKESPDPSERLFLLPGD HPRELVAPEVVFSFLKALCSSQEAPEGYSAEALRQKLHVMAVLAVSVPARRAVEKGAYCM RSSPKGVDFNRNWGQSGDSAAAAEKSHPKYPRAPQQPEIQILKSLLKRFQPTVFVSVHSG RFGVYTSNEAPSGEPEKPPSTPSGGAGPPDHLQEAAEGAPTTAGESREQQIAGVVHASAC SGHSFDCEFGSIDMFFEAAGNEIDFVKAHLTTDEGEPPVALALEVYRQGNLSNEDAKLKE AKAQLLSLLKAPEELLDLTLPAAADVADLLPQETEGEDSLYTAEALIKWQLTRGPLDRLS CFLSFNPSTQSALNSVVRLWVEALFALAESL
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00001580.fa Sequence name : ETH_00001580 Sequence length : 451 VALUES OF COMPUTED PARAMETERS Coef20 : 4.319 CoefTot : 0.189 ChDiff : -16 ZoneTo : 51 KR : 4 DE : 1 CleavSite : 49 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.676 1.565 0.153 0.636 MesoH : -0.525 0.258 -0.391 0.183 MuHd_075 : 24.725 20.079 6.260 6.637 MuHd_095 : 41.911 28.463 11.383 11.168 MuHd_100 : 41.149 28.363 11.767 10.492 MuHd_105 : 35.119 25.142 10.180 9.240 Hmax_075 : 9.683 13.125 0.386 3.687 Hmax_095 : 7.613 12.513 0.565 4.860 Hmax_100 : 5.700 12.500 0.379 4.860 Hmax_105 : 5.900 8.300 2.876 3.390 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.1004 0.8996 DFMC : 0.1378 0.8622 This protein is probably imported in mitochondria. f(Ser) = 0.0588 f(Arg) = 0.0784 CMi = 0.32715 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 451 ETH_00001580 MMGGPLLQATWLILLASAALSHLGTNAVRRFAQLEQRAMGAPAAGPRANSFEDSSNGGAPVYALPDFYHSYASMKKELRD 80 LGKSCGLSVHQAALGGVTVEYFHLKESPDPSERLFLLPGDHPRELVAPEVVFSFLKALCSSQEAPEGYSAEALRQKLHVM 160 AVLAVSVPARRAVEKGAYCMRSSPKGVDFNRNWGQSGDSAAAAEKSHPKYPRAPQQPEIQILKSLLKRFQPTVFVSVHSG 240 RFGVYTSNEAPSGEPEKPPSTPSGGAGPPDHLQEAAEGAPTTAGESREQQIAGVVHASACSGHSFDCEFGSIDMFFEAAG 320 NEIDFVKAHLTTDEGEPPVALALEVYRQGNLSNEDAKLKEAKAQLLSLLKAPEELLDLTLPAAADVADLLPQETEGEDSL 400 YTAEALIKWQLTRGPLDRLSCFLSFNPSTQSALNSVVRLWVEALFALAESL 480 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................... 480 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00001580 29 LGTNAVR|RF 0.074 . ETH_00001580 30 GTNAVRR|FA 0.288 . ETH_00001580 37 FAQLEQR|AM 0.093 . ETH_00001580 47 APAAGPR|AN 0.105 . ETH_00001580 75 HSYASMK|KE 0.064 . ETH_00001580 76 SYASMKK|EL 0.115 . ETH_00001580 79 SMKKELR|DL 0.159 . ETH_00001580 83 ELRDLGK|SC 0.108 . ETH_00001580 105 VEYFHLK|ES 0.057 . ETH_00001580 113 SPDPSER|LF 0.071 . ETH_00001580 123 LPGDHPR|EL 0.116 . ETH_00001580 136 VVFSFLK|AL 0.063 . ETH_00001580 154 YSAEALR|QK 0.098 . ETH_00001580 156 AEALRQK|LH 0.058 . ETH_00001580 170 AVSVPAR|RA 0.132 . ETH_00001580 171 VSVPARR|AV 0.296 . ETH_00001580 175 ARRAVEK|GA 0.101 . ETH_00001580 181 KGAYCMR|SS 0.151 . ETH_00001580 185 CMRSSPK|GV 0.113 . ETH_00001580 191 KGVDFNR|NW 0.157 . ETH_00001580 205 SAAAAEK|SH 0.079 . ETH_00001580 209 AEKSHPK|YP 0.067 . ETH_00001580 212 SHPKYPR|AP 0.119 . ETH_00001580 223 PEIQILK|SL 0.066 . ETH_00001580 227 ILKSLLK|RF 0.058 . ETH_00001580 228 LKSLLKR|FQ 0.270 . ETH_00001580 241 VSVHSGR|FG 0.084 . ETH_00001580 257 PSGEPEK|PP 0.064 . ETH_00001580 287 TTAGESR|EQ 0.104 . ETH_00001580 327 NEIDFVK|AH 0.061 . ETH_00001580 347 LALEVYR|QG 0.075 . ETH_00001580 357 LSNEDAK|LK 0.075 . ETH_00001580 359 NEDAKLK|EA 0.074 . ETH_00001580 362 AKLKEAK|AQ 0.063 . ETH_00001580 370 QLLSLLK|AP 0.057 . ETH_00001580 408 TAEALIK|WQ 0.061 . ETH_00001580 413 IKWQLTR|GP 0.099 . ETH_00001580 418 TRGPLDR|LS 0.085 . ETH_00001580 438 ALNSVVR|LW 0.105 . ____________________________^_________________

  • Fasta :-

    >ETH_00001580 ATGATGGGGGGTCCGTTGCTGCAAGCCACCTGGCTGATTCTCCTTGCTAGTGCAGCCCTC AGCCACCTTGGAACAAATGCTGTAAGGCGTTTTGCTCAGCTCGAGCAGAGAGCCATGGGA GCACCAGCTGCAGGGCCACGCGCAAACTCCTTCGAAGATTCGTCAAACGGAGGCGCCCCA GTTTACGCCTTGCCAGACTTCTACCACTCATACGCCAGCATGAAGAAGGAGCTCCGAGAT TTGGGGAAGTCCTGCGGCCTTTCTGTGCACCAAGCAGCCCTCGGCGGCGTGACGGTTGAG TATTTCCATTTGAAGGAAAGCCCTGACCCATCAGAGCGGCTCTTCCTGCTGCCCGGGGAC CACCCAAGGGAGTTGGTGGCCCCCGAAGTCGTTTTTTCCTTTCTCAAAGCCTTATGCAGC AGCCAAGAGGCCCCCGAAGGCTACAGTGCCGAGGCACTAAGGCAGAAGCTGCATGTCATG GCAGTACTTGCAGTCAGCGTCCCAGCAAGGCGCGCAGTTGAAAAGGGAGCCTACTGCATG CGAAGCAGCCCAAAGGGAGTAGATTTTAATAGGAATTGGGGGCAGAGTGGCGACTCGGCA GCAGCAGCAGAGAAAAGCCACCCAAAGTACCCGAGGGCCCCGCAACAGCCCGAAATACAA ATTCTGAAATCCCTTTTGAAGCGGTTTCAACCCACTGTCTTCGTCTCCGTGCATTCCGGG AGATTCGGAGTCTACACATCTAATGAGGCCCCCTCAGGAGAGCCAGAAAAGCCCCCCTCC ACCCCTAGCGGCGGTGCAGGGCCCCCGGACCATTTGCAGGAAGCTGCAGAGGGGGCCCCC ACCACCGCTGGGGAGTCTCGGGAGCAGCAGATAGCTGGAGTTGTCCATGCTTCTGCTTGT TCTGGCCACAGTTTTGACTGCGAGTTCGGATCCATTGACATGTTTTTCGAGGCCGCCGGG AACGAAATAGATTTTGTGAAGGCACATCTAACCACTGACGAAGGCGAGCCCCCCGTAGCC CTCGCTCTTGAGGTGTACAGACAGGGAAACCTCAGCAACGAAGACGCAAAGCTGAAGGAG GCTAAGGCTCAGTTGCTGTCTTTGTTGAAGGCCCCCGAAGAACTTCTGGATCTGACCCTG CCGGCTGCAGCAGATGTGGCAGACCTGCTGCCACAGGAAACTGAGGGGGAAGACTCCCTG TACACTGCAGAGGCCCTCATTAAGTGGCAGCTAACGAGAGGCCCTCTGGACCGACTCAGC TGTTTCTTATCTTTCAACCCTTCCACGCAGTCTGCCCTCAACTCCGTCGTGCGCCTCTGG GTAGAGGCCCTGTTTGCCCTCGCTGAGTCTCTCTGA
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  • Fasta :-

    MMGGPLLQATWLILLASAALSHLGTNAVRRFAQLEQRAMGAPAAGPRANSFEDSSNGGAP VYALPDFYHSYASMKKELRDLGKSCGLSVHQAALGGVTVEYFHLKESPDPSERLFLLPGD HPRELVAPEVVFSFLKALCSSQEAPEGYSAEALRQKLHVMAVLAVSVPARRAVEKGAYCM RSSPKGVDFNRNWGQSGDSAAAAEKSHPKYPRAPQQPEIQILKSLLKRFQPTVFVSVHSG RFGVYTSNEAPSGEPEKPPSTPSGGAGPPDHLQEAAEGAPTTAGESREQQIAGVVHASAC SGHSFDCEFGSIDMFFEAAGNEIDFVKAHLTTDEGEPPVALALEVYRQGNLSNEDAKLKE AKAQLLSLLKAPEELLDLTLPAAADVADLLPQETEGEDSLYTAEALIKWQLTRGPLDRLS CFLSFNPSTQSALNSVVRLWVEALFALAESL

  • title: Zn binding site
  • coordinates: H121,E124,H238
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_00001580252 SNEAPSGEPE0.995unspETH_00001580252 SNEAPSGEPE0.995unspETH_00001580252 SNEAPSGEPE0.995unspETH_00001580286 STAGESREQQ0.991unspETH_00001580352 SQGNLSNEDA0.998unspETH_0000158050 SPRANSFEDS0.998unspETH_00001580183 SCMRSSPKGV0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India