ETH_00002855 | hypothetical protein, conserved

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_IDPredictionOTHERSPmTPCS_Position
ETH_00002855OTHER0.9999980.0000000.000002
No Results

  • Fasta :-

    >ETH_00002855 MDKLVPQQQEQQQRRAAAFEQQQQQQQDQQHYRLHPPPQKQQQYQQKQKQRPQQPHRRCS KRSGSSTTTIIRTGSSSTSSRAITRRSSKTTITRSSTTTSPPPFPAAAAAAAAAAMSGEL HPHDQHGRHGTHCIVPHGAKERSQVEETLRRAKLPPLSLARDDFPSVVLSERYRDRRIKL DQDRLICEGHKGWSSVFATHACSSGCYFFEVEALSPKTDTLHFAGYPPDMQPRVHPYFRV GWACRYQRFDLPIGSNSFSYAISDFDKISVVHEARREQLLSDVNIKVGDVIGCSICIPEP AEWPPDPREDSKLYEFLLGKQQLQQQQQD
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00002855.fa Sequence name : ETH_00002855 Sequence length : 329 VALUES OF COMPUTED PARAMETERS Coef20 : 3.459 CoefTot : 0.000 ChDiff : 10 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.418 1.188 0.135 0.519 MesoH : -0.576 -0.019 -0.383 0.122 MuHd_075 : 1.171 7.460 2.577 0.671 MuHd_095 : 32.930 16.019 7.447 6.305 MuHd_100 : 21.127 10.898 5.022 3.984 MuHd_105 : 7.333 7.476 2.368 1.106 Hmax_075 : -13.213 -1.983 -5.560 -1.269 Hmax_095 : -1.900 1.200 -3.695 0.910 Hmax_100 : -10.100 0.200 -4.630 -0.140 Hmax_105 : -11.100 -2.200 -5.084 -0.887 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9589 0.0411 DFMC : 0.9564 0.0436
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 329 ETH_00002855 MDKLVPQQQEQQQRRAAAFEQQQQQQQDQQHYRLHPPPQKQQQYQQKQKQRPQQPHRRCSKRSGSSTTTIIRTGSSSTSS 80 RAITRRSSKTTITRSSTTTSPPPFPAAAAAAAAAAMSGELHPHDQHGRHGTHCIVPHGAKERSQVEETLRRAKLPPLSLA 160 RDDFPSVVLSERYRDRRIKLDQDRLICEGHKGWSSVFATHACSSGCYFFEVEALSPKTDTLHFAGYPPDMQPRVHPYFRV 240 GWACRYQRFDLPIGSNSFSYAISDFDKISVVHEARREQLLSDVNIKVGDVIGCSICIPEPAEWPPDPREDSKLYEFLLGK 320 QQLQQQQQD 400 .............................................................P.................. 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ......... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ ETH_00002855 3 ----MDK|LV 0.083 . ETH_00002855 14 QQEQQQR|RA 0.131 . ETH_00002855 15 QEQQQRR|AA 0.228 . ETH_00002855 33 QDQQHYR|LH 0.096 . ETH_00002855 40 LHPPPQK|QQ 0.063 . ETH_00002855 47 QQQYQQK|QK 0.071 . ETH_00002855 49 QYQQKQK|QR 0.069 . ETH_00002855 51 QQKQKQR|PQ 0.110 . ETH_00002855 57 RPQQPHR|RC 0.100 . ETH_00002855 58 PQQPHRR|CS 0.177 . ETH_00002855 61 PHRRCSK|RS 0.165 . ETH_00002855 62 HRRCSKR|SG 0.518 *ProP* ETH_00002855 72 STTTIIR|TG 0.076 . ETH_00002855 81 SSSTSSR|AI 0.112 . ETH_00002855 85 SSRAITR|RS 0.106 . ETH_00002855 86 SRAITRR|SS 0.421 . ETH_00002855 89 ITRRSSK|TT 0.131 . ETH_00002855 94 SKTTITR|SS 0.107 . ETH_00002855 128 PHDQHGR|HG 0.087 . ETH_00002855 140 IVPHGAK|ER 0.075 . ETH_00002855 142 PHGAKER|SQ 0.113 . ETH_00002855 150 QVEETLR|RA 0.068 . ETH_00002855 151 VEETLRR|AK 0.091 . ETH_00002855 153 ETLRRAK|LP 0.080 . ETH_00002855 161 PPLSLAR|DD 0.106 . ETH_00002855 172 SVVLSER|YR 0.080 . ETH_00002855 174 VLSERYR|DR 0.131 . ETH_00002855 176 SERYRDR|RI 0.090 . ETH_00002855 177 ERYRDRR|IK 0.443 . ETH_00002855 179 YRDRRIK|LD 0.131 . ETH_00002855 184 IKLDQDR|LI 0.100 . ETH_00002855 191 LICEGHK|GW 0.073 . ETH_00002855 217 VEALSPK|TD 0.059 . ETH_00002855 233 PPDMQPR|VH 0.081 . ETH_00002855 239 RVHPYFR|VG 0.092 . ETH_00002855 245 RVGWACR|YQ 0.091 . ETH_00002855 248 WACRYQR|FD 0.260 . ETH_00002855 267 AISDFDK|IS 0.068 . ETH_00002855 275 SVVHEAR|RE 0.067 . ETH_00002855 276 VVHEARR|EQ 0.090 . ETH_00002855 286 LSDVNIK|VG 0.064 . ETH_00002855 308 EWPPDPR|ED 0.081 . ETH_00002855 312 DPREDSK|LY 0.067 . ETH_00002855 320 YEFLLGK|QQ 0.059 . ____________________________^_________________

  • Fasta :-

    >ETH_00002855 ATGGACAAACTGGTGCCACAGCAGCAAGAGCAGCAACAACGCCGTGCTGCTGCATTCGAA CAGCAGCAGCAGCAGCAGCAGGATCAGCAGCATTATCGTCTTCATCCTCCTCCGCAGAAG CAGCAGCAGTACCAGCAAAAGCAGAAGCAGCGGCCACAGCAGCCTCATCGCCGCTGCAGC AAAAGGAGCGGCAGCAGCACCACCACCATCATACGTACGGGCAGCAGCAGCACCAGCAGC AGAGCCATTACCCGGCGCAGCAGCAAAACCACCATAACCCGCAGCAGCACCACCACCTCA CCACCGCCATTCCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAATGTCTGGGGAGCTG CACCCGCACGACCAGCACGGGCGACATGGGACGCACTGCATTGTGCCCCACGGGGCGAAG GAAAGGTCGCAGGTGGAGGAAACCCTCAGGAGGGCCAAGCTGCCCCCGCTGTCTTTAGCC AGAGATGACTTTCCTTCAGTGGTGCTGTCTGAGCGCTACCGCGACAGAAGAATTAAACTT GACCAAGACAGACTGATTTGCGAAGGACACAAGGGCTGGTCAAGCGTTTTCGCCACGCAT GCATGCAGCAGCGGCTGCTACTTCTTCGAGGTTGAAGCCCTCAGCCCCAAAACAGATACT TTGCATTTTGCCGGCTATCCCCCGGACATGCAGCCCAGGGTCCACCCTTACTTCAGAGTC GGCTGGGCGTGCCGGTACCAACGCTTTGACCTTCCCATCGGCAGCAACTCTTTCTCTTAC GCCATTTCCGACTTCGACAAAATTTCTGTTGTGCATGAGGCCAGGAGGGAGCAGCTTTTG AGCGACGTAAATATAAAAGTAGGAGACGTAATAGGCTGCTCCATCTGCATTCCTGAGCCC GCCGAGTGGCCGCCAGACCCTCGCGAAGACAGCAAACTCTATGAGTTCTTACTAGGCAAG CAGCAGCTACAGCAGCAACAGCAGGACTAG
  • Download Fasta

  • Fasta :-

    MDKLVPQQQEQQQRRAAAFEQQQQQQQDQQHYRLHPPPQKQQQYQQKQKQRPQQPHRRCS KRSGSSTTTIIRTGSSSTSSRAITRRSSKTTITRSSTTTSPPPFPAAAAAAAAAAMSGEL HPHDQHGRHGTHCIVPHGAKERSQVEETLRRAKLPPLSLARDDFPSVVLSERYRDRRIKL DQDRLICEGHKGWSSVFATHACSSGCYFFEVEALSPKTDTLHFAGYPPDMQPRVHPYFRV GWACRYQRFDLPIGSNSFSYAISDFDKISVVHEARREQLLSDVNIKVGDVIGCSICIPEP AEWPPDPREDSKLYEFLLGKQQLQQQQQD

    No Results
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IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_0000285588 STRRSSKTTI0.997unspETH_0000285588 STRRSSKTTI0.997unspETH_0000285588 STRRSSKTTI0.997unspETH_0000285596 SITRSSTTTS0.995unspETH_00002855215 SVEALSPKTD0.995unspETH_0000285560 SHRRCSKRSG0.997unspETH_0000285587 SITRRSSKTT0.996unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India