ETH_00002875 | phospholipase/carboxylesterase domain containing protein, putative

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_IDPredictionOTHERSPmTPCS_Position
ETH_00002875OTHER0.9033750.0895440.007081
No Results

  • Fasta :-

    >ETH_00002875 MSWWSLAAILTRAAWVGGFLLSVVVGLLWFFQEKLVFYPAVPKGYETPDKNPKGLHHPGE RNLPYEDVYIRTSDGLTLHGWLLRQPNARQAPTFLYFHGNAGNIGFRLPNLELMFRMVGV NILIISYRGYGYSEGSPTEEGVYTDAEAALDFLLENKTVNNRDIFVFGRSIGGAVAIELA RRRSDELKGIVVENTFTSLLEMLYIVFPFLGPFNLLVKAVQRMYMLNDEKVRTLTLPVLF ISGRQDKLVPPSHMDVLYSSCGARLKLREDVENGGHNDTWEVGGQSYYNRLREFVQVALS ASTSSEVSRASGAHSTISDTSTDVSLRRLQCSSAAKEKAVCT
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00002875.fa Sequence name : ETH_00002875 Sequence length : 342 VALUES OF COMPUTED PARAMETERS Coef20 : 4.843 CoefTot : 0.862 ChDiff : 0 ZoneTo : 32 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.359 2.153 0.310 0.899 MesoH : -0.458 0.605 -0.345 0.244 MuHd_075 : 22.568 19.716 4.386 6.856 MuHd_095 : 14.157 17.979 5.278 3.797 MuHd_100 : 14.094 19.853 5.576 4.461 MuHd_105 : 17.466 19.969 5.966 5.321 Hmax_075 : 18.463 21.175 3.890 7.376 Hmax_095 : 15.313 25.900 3.385 6.037 Hmax_100 : 16.900 25.800 3.988 6.900 Hmax_105 : 17.100 18.025 3.836 6.737 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.3704 0.6296 DFMC : 0.4050 0.5950 This protein is probably imported in mitochondria. f(Ser) = 0.0938 f(Arg) = 0.0313 CMi = 0.82418 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 342 ETH_00002875 MSWWSLAAILTRAAWVGGFLLSVVVGLLWFFQEKLVFYPAVPKGYETPDKNPKGLHHPGERNLPYEDVYIRTSDGLTLHG 80 WLLRQPNARQAPTFLYFHGNAGNIGFRLPNLELMFRMVGVNILIISYRGYGYSEGSPTEEGVYTDAEAALDFLLENKTVN 160 NRDIFVFGRSIGGAVAIELARRRSDELKGIVVENTFTSLLEMLYIVFPFLGPFNLLVKAVQRMYMLNDEKVRTLTLPVLF 240 ISGRQDKLVPPSHMDVLYSSCGARLKLREDVENGGHNDTWEVGGQSYYNRLREFVQVALSASTSSEVSRASGAHSTISDT 320 STDVSLRRLQCSSAAKEKAVCT 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ...................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00002875 12 LAAILTR|AA 0.134 . ETH_00002875 34 LWFFQEK|LV 0.064 . ETH_00002875 43 FYPAVPK|GY 0.063 . ETH_00002875 50 GYETPDK|NP 0.058 . ETH_00002875 53 TPDKNPK|GL 0.076 . ETH_00002875 61 LHHPGER|NL 0.077 . ETH_00002875 71 YEDVYIR|TS 0.076 . ETH_00002875 84 LHGWLLR|QP 0.077 . ETH_00002875 89 LRQPNAR|QA 0.146 . ETH_00002875 107 AGNIGFR|LP 0.074 . ETH_00002875 116 NLELMFR|MV 0.122 . ETH_00002875 128 ILIISYR|GY 0.169 . ETH_00002875 157 DFLLENK|TV 0.057 . ETH_00002875 162 NKTVNNR|DI 0.108 . ETH_00002875 169 DIFVFGR|SI 0.225 . ETH_00002875 181 VAIELAR|RR 0.094 . ETH_00002875 182 AIELARR|RS 0.099 . ETH_00002875 183 IELARRR|SD 0.176 . ETH_00002875 188 RRSDELK|GI 0.088 . ETH_00002875 218 PFNLLVK|AV 0.068 . ETH_00002875 222 LVKAVQR|MY 0.080 . ETH_00002875 230 YMLNDEK|VR 0.052 . ETH_00002875 232 LNDEKVR|TL 0.074 . ETH_00002875 244 VLFISGR|QD 0.085 . ETH_00002875 247 ISGRQDK|LV 0.233 . ETH_00002875 264 YSSCGAR|LK 0.084 . ETH_00002875 266 SCGARLK|LR 0.076 . ETH_00002875 268 GARLKLR|ED 0.090 . ETH_00002875 290 GQSYYNR|LR 0.114 . ETH_00002875 292 SYYNRLR|EF 0.085 . ETH_00002875 309 TSSEVSR|AS 0.183 . ETH_00002875 327 STDVSLR|RL 0.075 . ETH_00002875 328 TDVSLRR|LQ 0.102 . ETH_00002875 336 QCSSAAK|EK 0.066 . ETH_00002875 338 SSAAKEK|AV 0.117 . ____________________________^_________________

  • Fasta :-

    >ETH_00002875 ATGTCCTGGTGGAGCCTGGCCGCCATCCTAACCCGCGCGGCCTGGGTGGGCGGCTTTCTC CTATCTGTTGTCGTTGGTCTTTTGTGGTTCTTCCAAGAGAAGCTCGTCTTCTATCCTGCA GTTCCAAAAGGATATGAGACTCCGGATAAAAATCCAAAGGGGCTACATCATCCCGGAGAA CGAAATTTACCATATGAAGATGTTTATATTCGGACCAGCGATGGATTAACTCTTCACGGG TGGCTCTTGCGCCAGCCTAACGCTCGACAAGCACCTACCTTCCTTTACTTTCATGGAAAT GCCGGCAACATCGGATTTCGGCTACCGAATTTGGAGTTGATGTTCCGCATGGTTGGTGTG AATATTCTGATAATATCGTATAGAGGGTATGGGTACAGTGAAGGCTCACCCACGGAGGAG GGCGTGTACACAGACGCGGAGGCCGCCTTAGACTTCCTCTTGGAGAATAAGACGGTTAAC AATAGAGATATTTTTGTCTTTGGCCGCAGCATTGGGGGAGCAGTGGCGATAGAGCTTGCA AGACGTAGAAGTGACGAGTTGAAGGGGATTGTGGTTGAAAACACGTTCACGTCGCTCCTG GAGATGTTGTACATTGTTTTTCCCTTTTTGGGGCCATTCAACCTGCTGGTAAAAGCCGTG CAGCGCATGTACATGTTGAATGATGAGAAGGTTCGTACACTAACTCTACCTGTTTTATTC ATTTCTGGCCGCCAAGACAAGCTCGTACCCCCTTCGCATATGGACGTGTTATACAGCAGC TGTGGTGCGCGTCTGAAGCTGAGAGAAGATGTTGAAAATGGCGGCCACAACGACACGTGG GAAGTTGGGGGTCAAAGCTACTACAACAGACTTCGCGAGTTCGTGCAGGTGGCGCTTTCG GCTTCGACATCTTCTGAAGTCAGCCGTGCCTCCGGTGCCCATTCCACCATCAGCGACACG TCAACAGATGTTTCGTTGAGGCGGTTACAGTGCAGCTCCGCTGCAAAGGAGAAAGCCGTG TGCACGTAA
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  • Fasta :-

    MSWWSLAAILTRAAWVGGFLLSVVVGLLWFFQEKLVFYPAVPKGYETPDKNPKGLHHPGE RNLPYEDVYIRTSDGLTLHGWLLRQPNARQAPTFLYFHGNAGNIGFRLPNLELMFRMVGV NILIISYRGYGYSEGSPTEEGVYTDAEAALDFLLENKTVNNRDIFVFGRSIGGAVAIELA RRRSDELKGIVVENTFTSLLEMLYIVFPFLGPFNLLVKAVQRMYMLNDEKVRTLTLPVLF ISGRQDKLVPPSHMDVLYSSCGARLKLREDVENGGHNDTWEVGGQSYYNRLREFVQVALS ASTSSEVSRASGAHSTISDTSTDVSLRRLQCSSAAKEKAVCT

    No Results
    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_00002875136 SYSEGSPTEE0.995unspETH_00002875184 SARRRSDELK0.991unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India