ETH_00003350 | Presequence protease, related

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0003824      GO:0046872      

  • Computed_GO_Functions:  catalytic activity      metal ion binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
ETH_00003350OTHER0.7815300.1608920.057577
No Results

  • Fasta :-

    >ETH_00003350 MRRSPGWGVALQTSFSAVSGPLRLSNMSNKRSLSCRGPPGGPWGWGRPELLRGRGCVCVL LPLLLLQPLAAAAAAAAGPAGAPGAPPASPRGPPPLKPGAVCKSTLDPSGNPLEEALARG PPPPAGAPRGAPPSHPAFAVASDRLVGELGLRVTQYLHKASGLEVWNLESEKEEEEMAFN ICFRTPVSDSTGAAHVLEHAVLNGSELFAPAAAAAAAAAAPGFLLLQQRSLNSYANAWTW PDRTCFPFASSNSKDFQNLLSFYLSCVFRPLALAQPHHLRQEGWRYEAVPRSSSSSSSSS GSSSGGGGEGEAAVDCETSPELCELAFGGVVYSEMKGVWGIAAAAEELQRLQQLFPALQT YAQVAGGRPPDIPLLQQGALAAFHRALYVPRNAWITFFGGPRRGPQGGPPLDFLDKFLTQ NKIYSPQPPQVVGVQHSFKAPVYAEFPFASLAKDPKDLISVSWVLNPCPAPPSGPPEGGP QGAPEAGECPGGPGGPGRVALQVLDQLLLGSPACLLRKALAQSGLGLAVYAPGLDLDLKY AQFTVGLKEVQQQEGAAAAVERLVLQTLEAIAAKGFSAAEIEAAFNKVDFSLRETPRKEL PRGLIFSQRMAQELNYNRDPLGALEFEQDIWRLRERLAAGEKVFENMVKELLLENPHRVT LRMKSSAEYAEQQAAEERAALTAAEKEMGLEGIRQVAREHKALKLLQVTPQTQPDCSSSG SSSSSSSCSSRTDAGK
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00003350.fa Sequence name : ETH_00003350 Sequence length : 736 VALUES OF COMPUTED PARAMETERS Coef20 : 4.301 CoefTot : -2.921 ChDiff : -2 ZoneTo : 106 KR : 12 DE : 1 CleavSite : 93 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.712 2.276 0.441 0.709 MesoH : 0.050 0.539 -0.132 0.288 MuHd_075 : 30.541 17.998 7.050 6.552 MuHd_095 : 26.386 17.336 6.342 6.223 MuHd_100 : 23.787 16.934 7.259 5.514 MuHd_105 : 28.023 18.419 8.012 6.366 Hmax_075 : 10.967 21.788 1.495 2.847 Hmax_095 : 8.500 6.300 0.242 3.950 Hmax_100 : 11.200 7.600 2.342 5.610 Hmax_105 : 10.700 14.233 1.076 5.180 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.4839 0.5161 DFMC : 0.2333 0.7667 This protein is probably imported in mitochondria. f(Ser) = 0.0943 f(Arg) = 0.0849 CMi = 0.49950 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 736 ETH_00003350 MRRSPGWGVALQTSFSAVSGPLRLSNMSNKRSLSCRGPPGGPWGWGRPELLRGRGCVCVLLPLLLLQPLAAAAAAAAGPA 80 GAPGAPPASPRGPPPLKPGAVCKSTLDPSGNPLEEALARGPPPPAGAPRGAPPSHPAFAVASDRLVGELGLRVTQYLHKA 160 SGLEVWNLESEKEEEEMAFNICFRTPVSDSTGAAHVLEHAVLNGSELFAPAAAAAAAAAAPGFLLLQQRSLNSYANAWTW 240 PDRTCFPFASSNSKDFQNLLSFYLSCVFRPLALAQPHHLRQEGWRYEAVPRSSSSSSSSSGSSSGGGGEGEAAVDCETSP 320 ELCELAFGGVVYSEMKGVWGIAAAAEELQRLQQLFPALQTYAQVAGGRPPDIPLLQQGALAAFHRALYVPRNAWITFFGG 400 PRRGPQGGPPLDFLDKFLTQNKIYSPQPPQVVGVQHSFKAPVYAEFPFASLAKDPKDLISVSWVLNPCPAPPSGPPEGGP 480 QGAPEAGECPGGPGGPGRVALQVLDQLLLGSPACLLRKALAQSGLGLAVYAPGLDLDLKYAQFTVGLKEVQQQEGAAAAV 560 ERLVLQTLEAIAAKGFSAAEIEAAFNKVDFSLRETPRKELPRGLIFSQRMAQELNYNRDPLGALEFEQDIWRLRERLAAG 640 EKVFENMVKELLLENPHRVTLRMKSSAEYAEQQAAEERAALTAAEKEMGLEGIRQVAREHKALKLLQVTPQTQPDCSSSG 720 SSSSSSSCSSRTDAGK 800 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................ 800 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00003350 2 -----MR|RS 0.081 . ETH_00003350 3 ----MRR|SP 0.316 . ETH_00003350 23 AVSGPLR|LS 0.083 . ETH_00003350 30 LSNMSNK|RS 0.063 . ETH_00003350 31 SNMSNKR|SL 0.355 . ETH_00003350 36 KRSLSCR|GP 0.172 . ETH_00003350 47 GPWGWGR|PE 0.086 . ETH_00003350 52 GRPELLR|GR 0.092 . ETH_00003350 54 PELLRGR|GC 0.071 . ETH_00003350 91 APPASPR|GP 0.103 . ETH_00003350 97 RGPPPLK|PG 0.059 . ETH_00003350 103 KPGAVCK|ST 0.093 . ETH_00003350 119 LEEALAR|GP 0.082 . ETH_00003350 129 PPAGAPR|GA 0.195 . ETH_00003350 144 FAVASDR|LV 0.123 . ETH_00003350 152 VGELGLR|VT 0.063 . ETH_00003350 159 VTQYLHK|AS 0.067 . ETH_00003350 172 WNLESEK|EE 0.061 . ETH_00003350 184 AFNICFR|TP 0.071 . ETH_00003350 229 FLLLQQR|SL 0.109 . ETH_00003350 243 AWTWPDR|TC 0.080 . ETH_00003350 254 FASSNSK|DF 0.073 . ETH_00003350 269 YLSCVFR|PL 0.125 . ETH_00003350 280 AQPHHLR|QE 0.096 . ETH_00003350 285 LRQEGWR|YE 0.098 . ETH_00003350 291 RYEAVPR|SS 0.136 . ETH_00003350 336 VVYSEMK|GV 0.076 . ETH_00003350 350 AAEELQR|LQ 0.063 . ETH_00003350 368 AQVAGGR|PP 0.083 . ETH_00003350 385 ALAAFHR|AL 0.106 . ETH_00003350 391 RALYVPR|NA 0.114 . ETH_00003350 402 TFFGGPR|RG 0.078 . ETH_00003350 403 FFGGPRR|GP 0.135 . ETH_00003350 416 PLDFLDK|FL 0.065 . ETH_00003350 422 KFLTQNK|IY 0.071 . ETH_00003350 439 GVQHSFK|AP 0.072 . ETH_00003350 453 PFASLAK|DP 0.074 . ETH_00003350 456 SLAKDPK|DL 0.082 . ETH_00003350 498 GPGGPGR|VA 0.191 . ETH_00003350 517 SPACLLR|KA 0.105 . ETH_00003350 518 PACLLRK|AL 0.087 . ETH_00003350 539 GLDLDLK|YA 0.061 . ETH_00003350 548 QFTVGLK|EV 0.073 . ETH_00003350 562 AAAAVER|LV 0.147 . ETH_00003350 574 LEAIAAK|GF 0.090 . ETH_00003350 587 IEAAFNK|VD 0.065 . ETH_00003350 593 KVDFSLR|ET 0.079 . ETH_00003350 597 SLRETPR|KE 0.082 . ETH_00003350 598 LRETPRK|EL 0.097 . ETH_00003350 602 PRKELPR|GL 0.142 . ETH_00003350 609 GLIFSQR|MA 0.107 . ETH_00003350 618 QELNYNR|DP 0.082 . ETH_00003350 632 FEQDIWR|LR 0.070 . ETH_00003350 634 QDIWRLR|ER 0.080 . ETH_00003350 636 IWRLRER|LA 0.096 . ETH_00003350 642 RLAAGEK|VF 0.060 . ETH_00003350 649 VFENMVK|EL 0.061 . ETH_00003350 658 LLENPHR|VT 0.087 . ETH_00003350 662 PHRVTLR|MK 0.130 . ETH_00003350 664 RVTLRMK|SS 0.080 . ETH_00003350 678 QQAAEER|AA 0.099 . ETH_00003350 686 ALTAAEK|EM 0.059 . ETH_00003350 694 MGLEGIR|QV 0.084 . ETH_00003350 698 GIRQVAR|EH 0.091 . ETH_00003350 701 QVAREHK|AL 0.133 . ETH_00003350 704 REHKALK|LL 0.064 . ETH_00003350 731 SSSCSSR|TD 0.120 . ETH_00003350 736 SRTDAGK|-- 0.072 . ____________________________^_________________

  • Fasta :-

    >ETH_00003350 ATGCGGCGGAGCCCGGGCTGGGGCGTCGCCCTTCAGACTTCGTTTTCTGCAGTTTCTGGA CCTCTGAGGCTCTCAAATATGTCCAATAAAAGATCCTTGTCGTGTCGGGGGCCCCCTGGG GGCCCCTGGGGGTGGGGGCGGCCGGAGTTGCTGCGCGGGCGCGGGTGTGTCTGTGTGCTG CTGCCGCTGCTGCTGCTGCAGCCGCTCGCCGCGGCCGCAGCAGCAGCAGCAGGGCCTGCC GGGGCCCCCGGGGCCCCCCCCGCGAGCCCGCGGGGCCCCCCGCCCCTGAAGCCCGGCGCA GTGTGCAAGTCCACCCTGGACCCCAGCGGAAACCCGCTGGAGGAGGCGCTGGCGAGGGGC CCCCCCCCCCCCGCAGGGGCCCCCCGGGGGGCCCCCCCCAGCCACCCCGCGTTCGCAGTG GCCTCGGACCGGCTGGTGGGGGAGCTGGGGCTGCGGGTGACGCAGTACCTTCACAAGGCC TCGGGACTTGAAGTTTGGAACTTGGAAAGTGAAAAAGAAGAAGAAGAAATGGCATTTAAC ATTTGCTTCCGAACTCCCGTGTCGGACTCGACGGGCGCTGCGCACGTGCTGGAGCACGCG GTGCTGAACGGCTCGGAGCTGTTCGCGCCCGCTGCAGCAGCAGCAGCAGCAGCAGCGGCG CCGGGCTTCCTGCTGCTGCAGCAGCGCAGCCTCAACTCCTACGCCAACGCCTGGACCTGG CCTGACCGCACCTGCTTCCCCTTCGCCTCCTCCAACTCCAAAGACTTCCAAAACCTCCTC AGCTTTTACCTCAGCTGCGTCTTCAGGCCCCTGGCCCTCGCCCAGCCCCACCACCTGCGC CAGGAGGGCTGGCGCTACGAGGCCGTCCCCCGCAGCAGCAGCAGCAGCAGCAGCAGCAGC GGCAGCAGCAGCGGCGGCGGCGGGGAGGGCGAAGCGGCAGTGGACTGCGAGACGTCTCCG GAGCTTTGCGAGTTGGCCTTCGGGGGCGTGGTCTACAGCGAGATGAAGGGAGTGTGGGGT ATTGCTGCAGCAGCAGAAGAGCTGCAGCGGCTGCAGCAGCTTTTTCCCGCGCTGCAGACC TACGCACAAGTGGCTGGCGGGAGGCCCCCCGACATCCCTCTGCTGCAGCAGGGGGCCCTC GCGGCTTTCCACAGGGCCCTCTACGTGCCCCGCAACGCCTGGATTACCTTCTTCGGGGGC CCCCGCAGGGGCCCCCAGGGGGGCCCCCCCCTCGACTTCCTCGACAAGTTCCTCACCCAA AACAAAATCTACTCTCCCCAACCCCCCCAAGTCGTCGGCGTCCAGCACTCCTTCAAGGCC CCCGTGTACGCGGAGTTCCCTTTCGCCTCTTTAGCAAAAGACCCCAAAGACCTCATCAGC GTCAGCTGGGTACTAAATCCGTGCCCTGCGCCCCCCTCGGGGCCCCCCGAGGGGGGCCCC CAGGGGGCCCCCGAGGCGGGGGAGTGCCCCGGGGGCCCCGGGGGCCCCGGGAGAGTGGCG CTGCAGGTGCTGGATCAGCTGCTGCTGGGGTCTCCAGCATGTTTGCTGCGCAAGGCTTTG GCCCAGAGCGGGCTGGGGCTGGCTGTGTATGCCCCTGGGCTGGACTTGGATCTGAAATAT GCGCAGTTCACTGTGGGGCTGAAGGAAGTGCAGCAGCAGGAAGGCGCAGCAGCAGCAGTG GAGCGTTTGGTGCTGCAGACTTTGGAAGCAATTGCTGCTAAGGGATTTTCTGCTGCAGAA ATCGAAGCAGCTTTTAACAAGGTGGACTTCAGCTTGAGGGAAACTCCCCGCAAAGAGCTC CCCAGGGGGCTCATCTTCTCCCAGCGCATGGCCCAGGAACTCAACTACAACAGGGACCCT TTGGGGGCTCTCGAGTTTGAACAGGATATTTGGCGGCTGCGGGAGCGGCTGGCAGCGGGG GAAAAGGTCTTCGAGAATATGGTCAAGGAACTTTTGCTGGAGAATCCCCACCGCGTGACT TTGCGCATGAAGAGCAGCGCGGAATATGCAGAGCAGCAAGCAGCAGAAGAGAGAGCAGCA CTGACAGCAGCAGAAAAGGAAATGGGACTCGAAGGAATTCGGCAAGTTGCCAGGGAACAT AAGGCCCTCAAGCTGCTGCAGGTGACCCCCCAAACACAGCCAGACTGCAGCAGCAGCGGC AGCAGTAGCAGCAGCAGCAGTTGCAGCAGCAGAACGGACGCCGGGAAGTAG
  • Download Fasta

  • Fasta :-

    MRRSPGWGVALQTSFSAVSGPLRLSNMSNKRSLSCRGPPGGPWGWGRPELLRGRGCVCVL LPLLLLQPLAAAAAAAAGPAGAPGAPPASPRGPPPLKPGAVCKSTLDPSGNPLEEALARG PPPPAGAPRGAPPSHPAFAVASDRLVGELGLRVTQYLHKASGLEVWNLESEKEEEEMAFN ICFRTPVSDSTGAAHVLEHAVLNGSELFAPAAAAAAAAAAPGFLLLQQRSLNSYANAWTW PDRTCFPFASSNSKDFQNLLSFYLSCVFRPLALAQPHHLRQEGWRYEAVPRSSSSSSSSS GSSSGGGGEGEAAVDCETSPELCELAFGGVVYSEMKGVWGIAAAAEELQRLQQLFPALQT YAQVAGGRPPDIPLLQQGALAAFHRALYVPRNAWITFFGGPRRGPQGGPPLDFLDKFLTQ NKIYSPQPPQVVGVQHSFKAPVYAEFPFASLAKDPKDLISVSWVLNPCPAPPSGPPEGGP QGAPEAGECPGGPGGPGRVALQVLDQLLLGSPACLLRKALAQSGLGLAVYAPGLDLDLKY AQFTVGLKEVQQQEGAAAAVERLVLQTLEAIAAKGFSAAEIEAAFNKVDFSLRETPRKEL PRGLIFSQRMAQELNYNRDPLGALEFEQDIWRLRERLAAGEKVFENMVKELLLENPHRVT LRMKSSAEYAEQQAAEERAALTAAEKEMGLEGIRQVAREHKALKLLQVTPQTQPDCSSSG SSSSSSSCSSRTDAGK

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_0000335089 SAPPASPRGP0.994unspETH_0000335089 SAPPASPRGP0.994unspETH_0000335089 SAPPASPRGP0.994unspETH_00003350293 SVPRSSSSSS0.993unspETH_00003350296 SSSSSSSSSS0.992unspETH_00003350297 SSSSSSSSSG0.99unspETH_00003350298 SSSSSSSSGS0.99unspETH_00003350300 SSSSSSGSSS0.99unspETH_00003350304 SSGSSSGGGG0.991unspETH_00003350591 SKVDFSLRET0.995unspETH_00003350595 TSLRETPRKE0.994unspETH_00003350665 SLRMKSSAEY0.991unspETH_00003350726 SSSSSSSCSS0.991unspETH_00003350730 SSSCSSRTDA0.995unspETH_0000335028 SLSNMSNKRS0.993unspETH_0000335034 SKRSLSCRGP0.993unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India