ETH_00003360 | Chromosome III, complete sequence, related

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

No Results
No Results

  • Fasta :-

    >ETH_00003360 MGEGNAQQLADQRKMHIVSLNFLNPEFFLEDFVAKEYSFLRQYCSNISIFCDAHDGALWW SELFSGKQALGRSVFGLYARPNEGQSGEQQQQQQQQQQDLRKPPLYASSTACFQGYEPQH MQADTRDWLDVDVIDMTWLGNNVHALRHSYWSLNREVIEDLRDGAAPP
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00003360.fa Sequence name : ETH_00003360 Sequence length : 168 VALUES OF COMPUTED PARAMETERS Coef20 : 3.421 CoefTot : -0.250 ChDiff : -9 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : -0.006 0.918 -0.158 0.453 MesoH : -0.857 0.066 -0.488 0.165 MuHd_075 : 19.931 10.063 4.174 3.136 MuHd_095 : 8.851 12.614 3.589 2.090 MuHd_100 : 10.094 5.907 1.535 0.383 MuHd_105 : 12.769 0.468 1.110 1.253 Hmax_075 : -2.800 2.333 -3.748 1.190 Hmax_095 : -3.150 6.388 -2.024 1.382 Hmax_100 : -5.200 3.800 -2.650 1.320 Hmax_105 : -2.400 0.700 -4.561 0.380 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9389 0.0611 DFMC : 0.9729 0.0271
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 168 ETH_00003360 MGEGNAQQLADQRKMHIVSLNFLNPEFFLEDFVAKEYSFLRQYCSNISIFCDAHDGALWWSELFSGKQALGRSVFGLYAR 80 PNEGQSGEQQQQQQQQQQDLRKPPLYASSTACFQGYEPQHMQADTRDWLDVDVIDMTWLGNNVHALRHSYWSLNREVIED 160 LRDGAAPP 240 ................................................................................ 80 ................................................................................ 160 ........ 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00003360 13 QQLADQR|KM 0.074 . ETH_00003360 14 QLADQRK|MH 0.103 . ETH_00003360 35 LEDFVAK|EY 0.066 . ETH_00003360 41 KEYSFLR|QY 0.088 . ETH_00003360 67 SELFSGK|QA 0.061 . ETH_00003360 72 GKQALGR|SV 0.218 . ETH_00003360 80 VFGLYAR|PN 0.092 . ETH_00003360 101 QQQQDLR|KP 0.068 . ETH_00003360 102 QQQDLRK|PP 0.074 . ETH_00003360 126 HMQADTR|DW 0.125 . ETH_00003360 147 NNVHALR|HS 0.095 . ETH_00003360 155 SYWSLNR|EV 0.109 . ETH_00003360 162 EVIEDLR|DG 0.069 . ____________________________^_________________

  • Fasta :-

    >ETH_00003360 ATGGGCGAAGGGAATGCGCAGCAGCTGGCGGACCAGCGGAAAATGCATATTGTGTCTTTG AACTTCTTGAACCCCGAGTTCTTCCTCGAAGACTTTGTTGCCAAGGAATATTCCTTCTTG AGGCAGTACTGCAGCAACATTTCCATCTTCTGCGACGCCCACGACGGAGCCTTGTGGTGG TCGGAGCTGTTTAGCGGCAAGCAGGCGCTGGGGCGAAGTGTCTTTGGGCTTTACGCGAGG CCCAACGAGGGCCAGTCTGGAGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAGACCTG CGGAAGCCGCCGCTGTACGCCAGCAGCACGGCTTGCTTCCAGGGCTACGAGCCGCAGCAC ATGCAGGCCGACACCCGCGACTGGCTCGATGTAGACGTCATCGACATGACTTGGCTCGGA AATAATGTGCATGCACTTCGCCACTCTTACTGGTCTCTGAACAGAGAGGTTATTGAGGAC CTCCGGGATGGGGCTGCACCGCCCTGA
  • Download Fasta

  • Fasta :-

    No Results
    No Results
No Results
No Results
No Results

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India