ETH_00003895 | hypothetical protein, conserved

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0003676      GO:0008270      

  • Computed_GO_Functions:  nucleic acid binding      zinc ion binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

No Results
No Results

  • Fasta :-

    >ETH_00003895 MLENSPYITWDPFHSAVTVIENVIARSRELSAMSPMLPEDGSTMQAFLMRKERRYIQMGM GTSNWGNAPIDRLVGPALTYWMYLQRTIDLSDWATAQRRLLECFDKTMSQSQLLTELAIV RWNGNTKEYTDQFAAVAEREVGVAPDELADSYCAGLPTDHHLLIRNNGLVKYTSWEQAAT AAARLYESMQTVLELREGANQAIRAATEATETQRKQKNGTRPGENTGSCYERQGRGHPAR VCPSKEERTKRPGETCKKCGGLEHYARDCPTHHRGRAEPENKSSVVGDERSRPRSHGKGM MCPVATGPNAIPVSLERGNRLLKTVEKNKMSDEVVQGTQPVGVWPGAAAERGGSEREDG
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00003895.fa Sequence name : ETH_00003895 Sequence length : 359 VALUES OF COMPUTED PARAMETERS Coef20 : 3.720 CoefTot : 0.122 ChDiff : 1 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.265 0.941 0.143 0.460 MesoH : -0.898 -0.095 -0.503 0.087 MuHd_075 : 0.829 11.646 2.753 3.158 MuHd_095 : 30.601 19.825 8.087 5.122 MuHd_100 : 26.664 17.482 8.081 4.532 MuHd_105 : 18.807 10.716 6.655 2.785 Hmax_075 : 5.483 8.900 -0.537 4.440 Hmax_095 : 14.000 10.587 1.635 4.244 Hmax_100 : 13.600 9.500 1.385 4.900 Hmax_105 : 11.500 6.300 1.089 3.628 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8134 0.1866 DFMC : 0.8869 0.1131
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 359 ETH_00003895 MLENSPYITWDPFHSAVTVIENVIARSRELSAMSPMLPEDGSTMQAFLMRKERRYIQMGMGTSNWGNAPIDRLVGPALTY 80 WMYLQRTIDLSDWATAQRRLLECFDKTMSQSQLLTELAIVRWNGNTKEYTDQFAAVAEREVGVAPDELADSYCAGLPTDH 160 HLLIRNNGLVKYTSWEQAATAAARLYESMQTVLELREGANQAIRAATEATETQRKQKNGTRPGENTGSCYERQGRGHPAR 240 VCPSKEERTKRPGETCKKCGGLEHYARDCPTHHRGRAEPENKSSVVGDERSRPRSHGKGMMCPVATGPNAIPVSLERGNR 320 LLKTVEKNKMSDEVVQGTQPVGVWPGAAAERGGSEREDG 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ..........P..................................................................... 320 ....................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ ETH_00003895 26 IENVIAR|SR 0.157 . ETH_00003895 28 NVIARSR|EL 0.094 . ETH_00003895 50 MQAFLMR|KE 0.102 . ETH_00003895 51 QAFLMRK|ER 0.076 . ETH_00003895 53 FLMRKER|RY 0.336 . ETH_00003895 54 LMRKERR|YI 0.300 . ETH_00003895 72 GNAPIDR|LV 0.204 . ETH_00003895 86 YWMYLQR|TI 0.088 . ETH_00003895 98 DWATAQR|RL 0.074 . ETH_00003895 99 WATAQRR|LL 0.133 . ETH_00003895 106 LLECFDK|TM 0.069 . ETH_00003895 121 TELAIVR|WN 0.087 . ETH_00003895 127 RWNGNTK|EY 0.076 . ETH_00003895 139 FAAVAER|EV 0.154 . ETH_00003895 165 DHHLLIR|NN 0.102 . ETH_00003895 171 RNNGLVK|YT 0.085 . ETH_00003895 184 AATAAAR|LY 0.098 . ETH_00003895 196 QTVLELR|EG 0.064 . ETH_00003895 204 GANQAIR|AA 0.133 . ETH_00003895 214 EATETQR|KQ 0.072 . ETH_00003895 215 ATETQRK|QK 0.085 . ETH_00003895 217 ETQRKQK|NG 0.119 . ETH_00003895 221 KQKNGTR|PG 0.090 . ETH_00003895 232 TGSCYER|QG 0.113 . ETH_00003895 235 CYERQGR|GH 0.163 . ETH_00003895 240 GRGHPAR|VC 0.134 . ETH_00003895 245 ARVCPSK|EE 0.081 . ETH_00003895 248 CPSKEER|TK 0.169 . ETH_00003895 250 SKEERTK|RP 0.062 . ETH_00003895 251 KEERTKR|PG 0.555 *ProP* ETH_00003895 257 RPGETCK|KC 0.086 . ETH_00003895 258 PGETCKK|CG 0.079 . ETH_00003895 267 GLEHYAR|DC 0.123 . ETH_00003895 274 DCPTHHR|GR 0.078 . ETH_00003895 276 PTHHRGR|AE 0.085 . ETH_00003895 282 RAEPENK|SS 0.077 . ETH_00003895 290 SVVGDER|SR 0.085 . ETH_00003895 292 VGDERSR|PR 0.086 . ETH_00003895 294 DERSRPR|SH 0.228 . ETH_00003895 298 RPRSHGK|GM 0.081 . ETH_00003895 317 IPVSLER|GN 0.079 . ETH_00003895 320 SLERGNR|LL 0.273 . ETH_00003895 323 RGNRLLK|TV 0.208 . ETH_00003895 327 LLKTVEK|NK 0.063 . ETH_00003895 329 KTVEKNK|MS 0.072 . ETH_00003895 351 PGAAAER|GG 0.110 . ETH_00003895 356 ERGGSER|ED 0.122 . ____________________________^_________________

  • Fasta :-

    >ETH_00003895 ATGCTAGAGAACAGTCCGTACATCACGTGGGACCCATTCCACTCTGCGGTGACTGTGATA GAGAATGTTATAGCTAGGTCTAGAGAATTGAGTGCAATGTCACCGATGCTCCCTGAAGAC GGTAGTACTATGCAGGCCTTTTTGATGCGTAAGGAACGACGGTACATCCAGATGGGAATG GGGACCAGCAACTGGGGGAACGCACCTATCGACCGTCTTGTGGGTCCGGCTCTAACTTAT TGGATGTACCTACAGCGAACTATCGACCTAAGCGACTGGGCGACTGCACAACGCCGGCTT CTGGAATGCTTCGACAAAACAATGTCGCAGAGTCAACTGCTGACGGAGTTGGCTATAGTA CGGTGGAATGGAAACACTAAAGAGTATACGGACCAATTTGCGGCTGTAGCGGAGCGTGAA GTTGGGGTCGCCCCCGACGAACTCGCTGACTCCTACTGCGCTGGGCTACCAACTGACCAC CATCTTCTCATTAGAAATAATGGGCTGGTGAAGTATACTTCCTGGGAACAAGCGGCGACA GCAGCAGCGCGACTCTATGAATCTATGCAGACCGTGCTAGAGCTACGAGAAGGGGCTAAT CAAGCCATAAGAGCTGCTACTGAGGCAACTGAAACTCAGCGGAAGCAGAAAAATGGAACT AGGCCTGGAGAAAACACCGGGAGCTGCTACGAGCGCCAGGGTCGTGGACACCCGGCACGA GTTTGTCCCAGCAAAGAGGAACGAACCAAGCGCCCGGGAGAGACCTGCAAGAAGTGTGGA GGTCTGGAACACTATGCTCGTGATTGTCCTACACACCACCGAGGCCGTGCCGAGCCGGAA AACAAGAGCAGCGTGGTTGGAGACGAGCGTTCTAGGCCTCGTAGCCATGGCAAAGGGATG ATGTGTCCGGTAGCGACAGGACCTAATGCCATTCCAGTCTCCCTGGAGCGGGGGAACCGC CTCCTCAAGACGGTGGAGAAAAACAAAATGAGCGATGAGGTCGTGCAGGGGACTCAGCCG GTTGGAGTCTGGCCCGGCGCCGCTGCGGAGAGAGGAGGCTCCGAGCGAGAAGACGGATAG
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  • Fasta :-

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_00003895295 SSRPRSHGKG0.997unspETH_00003895354 SERGGSERED0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India