ETH_00004650 | GPI-anchor transamidase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008233      

  • Computed_GO_Functions:  peptidase activity      

  • Computed_GO_Process_IDs:  GO:0006508      

  • Computed_GO_Processes:  proteolysis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
ETH_00004650SP0.1935730.8064230.000005CS pos: 24-25. LLA-LP. Pr: 0.3201
No Results

  • Fasta :-

    >ETH_00004650 MPQQQQQLLLLLLLLLPFLLSLLALPCPADVSSSTGGGPEDQQQQQQQQQRQPPSPPSQQ QQQQQEQQAPPQERRPSGASEGVHLPAAAAAAAAAASAAAAAAAAAQQQQQQLLREFVAL GDPADTHAVVASSSRQWLNYRHMANALAFYRSLKQQGIKDKNIILMLAGQDGPCSPRSAF PAGVYRHRSRAQNLFGGHDACAAALHRQQQQQQQQQQQEQQQQQEECALFGEGWEGAEVD YSGEAANADALLRVLLGVHTPETQQQQRLRSSSSSNVVVFLTGHGGNEFLKFSDWQTLQQ QQLAAAVQRMQQQRRFRRLLLIAETCQAATLLSGVRTPHVLRLSSSLKGESSYSYFSDSS MGTSLVDRWTHSVVNFLNRHANSHAAAAAAAARSSSSSSSSSSGGGGGSSMGVGRLLPSV AALLDSLDPNFLMSRCGVEEEPIPGSPTPLTQLPLEVFFSNRRKPVAYNFAYPAAAAAAA ADSSAAAAAAAAAAAAAAEPLHLWHSEALRFFPALNAPMQQQQQQQHQQQQQQQQHQQQQ HQQHQQQQQQRQQQPQRQLQQQHFEWVDPAVAAPLAAVLAGVACVATAASL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00004650.fa Sequence name : ETH_00004650 Sequence length : 591 VALUES OF COMPUTED PARAMETERS Coef20 : 3.946 CoefTot : 0.315 ChDiff : -1 ZoneTo : 29 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.476 3.035 0.490 0.945 MesoH : -0.050 0.429 -0.207 0.267 MuHd_075 : 13.369 15.394 4.534 4.180 MuHd_095 : 10.375 15.873 4.072 3.724 MuHd_100 : 13.471 18.958 4.866 4.596 MuHd_105 : 12.434 15.982 4.071 3.864 Hmax_075 : 20.650 26.600 4.361 7.817 Hmax_095 : 19.600 26.600 4.361 7.700 Hmax_100 : 20.500 26.600 4.361 7.800 Hmax_105 : 10.300 26.600 4.361 7.817 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9982 0.0018 DFMC : 0.9975 0.0025
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 591 ETH_00004650 MPQQQQQLLLLLLLLLPFLLSLLALPCPADVSSSTGGGPEDQQQQQQQQQRQPPSPPSQQQQQQQEQQAPPQERRPSGAS 80 EGVHLPAAAAAAAAAASAAAAAAAAAQQQQQQLLREFVALGDPADTHAVVASSSRQWLNYRHMANALAFYRSLKQQGIKD 160 KNIILMLAGQDGPCSPRSAFPAGVYRHRSRAQNLFGGHDACAAALHRQQQQQQQQQQQEQQQQQEECALFGEGWEGAEVD 240 YSGEAANADALLRVLLGVHTPETQQQQRLRSSSSSNVVVFLTGHGGNEFLKFSDWQTLQQQQLAAAVQRMQQQRRFRRLL 320 LIAETCQAATLLSGVRTPHVLRLSSSLKGESSYSYFSDSSMGTSLVDRWTHSVVNFLNRHANSHAAAAAAAARSSSSSSS 400 SSSGGGGGSSMGVGRLLPSVAALLDSLDPNFLMSRCGVEEEPIPGSPTPLTQLPLEVFFSNRRKPVAYNFAYPAAAAAAA 480 ADSSAAAAAAAAAAAAAAEPLHLWHSEALRFFPALNAPMQQQQQQQHQQQQQQQQHQQQQHQQHQQQQQQRQQQPQRQLQ 560 QQHFEWVDPAVAAPLAAVLAGVACVATAASL 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .............................................................................P.. 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ............................... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ ETH_00004650 51 QQQQQQR|QP 0.085 . ETH_00004650 74 QAPPQER|RP 0.096 . ETH_00004650 75 APPQERR|PS 0.264 . ETH_00004650 115 QQQQLLR|EF 0.081 . ETH_00004650 135 VVASSSR|QW 0.093 . ETH_00004650 141 RQWLNYR|HM 0.085 . ETH_00004650 151 NALAFYR|SL 0.146 . ETH_00004650 154 AFYRSLK|QQ 0.145 . ETH_00004650 159 LKQQGIK|DK 0.077 . ETH_00004650 161 QQGIKDK|NI 0.075 . ETH_00004650 177 DGPCSPR|SA 0.168 . ETH_00004650 186 FPAGVYR|HR 0.117 . ETH_00004650 188 AGVYRHR|SR 0.131 . ETH_00004650 190 VYRHRSR|AQ 0.090 . ETH_00004650 207 CAAALHR|QQ 0.104 . ETH_00004650 253 NADALLR|VL 0.070 . ETH_00004650 268 ETQQQQR|LR 0.080 . ETH_00004650 270 QQQQRLR|SS 0.156 . ETH_00004650 291 GGNEFLK|FS 0.083 . ETH_00004650 309 LAAAVQR|MQ 0.100 . ETH_00004650 314 QRMQQQR|RF 0.106 . ETH_00004650 315 RMQQQRR|FR 0.147 . ETH_00004650 317 QQQRRFR|RL 0.205 . ETH_00004650 318 QQRRFRR|LL 0.532 *ProP* ETH_00004650 336 TLLSGVR|TP 0.071 . ETH_00004650 342 RTPHVLR|LS 0.075 . ETH_00004650 348 RLSSSLK|GE 0.069 . ETH_00004650 368 GTSLVDR|WT 0.127 . ETH_00004650 379 VVNFLNR|HA 0.105 . ETH_00004650 393 AAAAAAR|SS 0.166 . ETH_00004650 415 SSMGVGR|LL 0.093 . ETH_00004650 435 PNFLMSR|CG 0.075 . ETH_00004650 462 EVFFSNR|RK 0.073 . ETH_00004650 463 VFFSNRR|KP 0.081 . ETH_00004650 464 FFSNRRK|PV 0.120 . ETH_00004650 510 WHSEALR|FF 0.095 . ETH_00004650 551 QQQQQQR|QQ 0.111 . ETH_00004650 557 RQQQPQR|QL 0.123 . ____________________________^_________________

  • Fasta :-

    >ETH_00004650 ATGCCGCAGCAGCAACAGCAACTGCTGCTGCTGCTGCTGCTGCTGCTGCCCTTCCTGCTA TCTCTGCTGGCCCTCCCCTGCCCTGCGGACGTCTCCAGTTCCACGGGCGGGGGCCCCGAA GACCAGCAGCAGCAGCAGCAGCAGCAGCAGCGGCAGCCTCCCTCCCCGCCCTCCCAGCAG CAGCAGCAGCAGCAGGAGCAGCAGGCCCCGCCTCAGGAGCGCAGGCCCTCAGGCGCCTCC GAAGGCGTCCACTTGCCGGCTGCCGCTGCTGCAGCTGCCGCTGCAGCCTCCGCTGCTGCT GCTGCTGCTGCTGCTGCACAGCAGCAGCAGCAGCAGCTGCTGCGGGAGTTCGTGGCGCTG GGAGACCCCGCGGACACGCACGCCGTGGTGGCTTCGAGCTCGCGGCAGTGGCTGAACTAC CGGCACATGGCGAACGCGCTGGCCTTTTACAGAAGTCTGAAGCAGCAAGGAATAAAAGAC AAAAATATAATTCTGATGCTTGCAGGGCAGGACGGGCCCTGCTCGCCCCGCAGCGCCTTC CCCGCCGGGGTGTACAGACACCGCAGCCGCGCCCAGAACCTCTTCGGCGGCCACGACGCC TGCGCCGCCGCCCTGCACCGGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGGAGCAG CAGCAGCAGCAGGAGGAGTGCGCGCTGTTTGGGGAGGGGTGGGAAGGCGCGGAGGTGGAC TACAGCGGGGAAGCAGCGAATGCGGACGCGCTGCTGCGGGTGCTGCTGGGTGTACATACA CCCGAGACGCAGCAGCAGCAGCGGCTGCGCAGCAGCAGCAGCAGCAACGTGGTGGTGTTT CTGACGGGGCACGGGGGCAACGAGTTTCTCAAGTTCAGCGACTGGCAGACGCTGCAGCAG CAGCAGCTGGCTGCTGCAGTGCAGCGCATGCAGCAGCAGCGGCGCTTCCGGCGGCTGCTG CTGATCGCCGAGACCTGCCAGGCCGCCACGCTGCTCTCGGGTGTACGTACACCCCACGTC CTCAGACTCTCTTCTTCCCTAAAAGGAGAAAGCAGTTATTCTTATTTTTCCGACTCTTCA ATGGGCACTTCTTTGGTGGACCGCTGGACCCACTCAGTGGTCAACTTCCTCAACCGCCAC GCCAACAGCCACGCCGCCGCTGCTGCTGCTGCTGCGCGCAGCAGCAGCAGCAGCAGCAGC AGCAGCAGCGGCGGCGGCGGCGGCAGCAGCATGGGCGTGGGACGGCTGCTGCCCTCCGTC GCCGCGCTGCTCGACAGCTTGGACCCCAACTTTCTCATGTCGAGGTGTGGGGTCGAGGAG GAGCCGATCCCGGGATCGCCGACTCCCCTTACGCAGCTGCCCCTGGAGGTCTTCTTCTCC AACAGACGCAAACCCGTCGCCTACAACTTCGCCTATCCTGCTGCTGCTGCTGCTGCTGCG GCAGACTCCAGCGCAGCAGCAGCAGCTGCTGCAGCAGCTGCTGCTGCTGCTGCTGAACCG CTGCACCTGTGGCACTCCGAGGCCCTTAGATTCTTTCCTGCGCTCAATGCGCCCATGCAG CAGCAGCAGCAGCAGCAACACCAGCAGCAGCAGCAGCAGCAGCAACACCAGCAGCAGCAG CACCAGCAACACCAGCAGCAGCAGCAGCAGCGGCAGCAGCAGCCGCAGCGGCAGCTGCAG CAGCAGCACTTTGAATGGGTAGACCCAGCGGTGGCCGCTCCTCTTGCTGCTGTTCTTGCG GGGGTTGCTTGTGTGGCAACTGCAGCCTCTCTTTGA
  • Download Fasta

  • Fasta :-

    MPQQQQQLLLLLLLLLPFLLSLLALPCPADVSSSTGGGPEDQQQQQQQQQRQPPSPPSQQ QQQQQEQQAPPQERRPSGASEGVHLPAAAAAAAAAASAAAAAAAAAQQQQQQLLREFVAL GDPADTHAVVASSSRQWLNYRHMANALAFYRSLKQQGIKDKNIILMLAGQDGPCSPRSAF PAGVYRHRSRAQNLFGGHDACAAALHRQQQQQQQQQQQEQQQQQEECALFGEGWEGAEVD YSGEAANADALLRVLLGVHTPETQQQQRLRSSSSSNVVVFLTGHGGNEFLKFSDWQTLQQ QQLAAAVQRMQQQRRFRRLLLIAETCQAATLLSGVRTPHVLRLSSSLKGESSYSYFSDSS MGTSLVDRWTHSVVNFLNRHANSHAAAAAAAARSSSSSSSSSSGGGGGSSMGVGRLLPSV AALLDSLDPNFLMSRCGVEEEPIPGSPTPLTQLPLEVFFSNRRKPVAYNFAYPAAAAAAA ADSSAAAAAAAAAAAAAAEPLHLWHSEALRFFPALNAPMQQQQQQQHQQQQQQQQHQQQQ HQQHQQQQQQRQQQPQRQLQQQHFEWVDPAVAAPLAAVLAGVACVATAASL

    No Results
    No Results
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No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_0000465077 SERRPSGASE0.991unspETH_00004650398 SSSSSSSSSS0.993unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India