ETH_00004860 | apical membrane antigen, putative

  • Computed_GO_Component_IDs:  GO:0016020      

  • Computed_GO_Components:  membrane      

  • Computed_GO_Function_IDs:        

  • Computed_GO_Functions:        

  • Computed_GO_Process_IDs:  GO:0009405      

  • Computed_GO_Processes:  pathogenesis      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

No Results
No Results

  • Fasta :-

    >ETH_00004860 MEALREGFGLRRLCCISAVAAFCLFGAKPSQAAASNGSQVASNPWGDSMQKFNIPYTHGS GVYVDLGNEKTVSNKKYREPAGRCPVMGKEIRLQQPTTDSSIWPGNYLEKVPTKGSPQDT RPLGGGFAMWDTTPVKISPLTLSELEALAEQQRAKNDPTSPASEKLAKVTDGLGLCAWWA WATYVPNGTTNLNDKYRYPFVWNEETKVCTLLGVSMQLLEGAGKYCSVGDASPVLTWYCF YPEKTTRPVSYNSPYVREDHATACPEKAILGAHFGTWDGTTCQRMKAAKQITVPNPTECG KAVFKVSSSDNPTQYTKPPTTEASSSTSSSNAVATMWPVGAFSKDEPRTQGVGTNYANWY TNGTCEMYDMVPTCFTLAPNQFSFTSLGSADPSTAELPPCTEASEGWEIYGYCECGDGHS TPWKCENGQWIGGSDDCNCSSILPVALGVSFGLLVPIAALIAYFIYKRKKETSIAKNPEK KKLLDEDEERDEEFLKVQEKRKHKQSDLAQEAEPSFWGETPQDHTNVVVDHNAHDAYY
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00004860.fa Sequence name : ETH_00004860 Sequence length : 538 VALUES OF COMPUTED PARAMETERS Coef20 : 4.609 CoefTot : 0.000 ChDiff : -11 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.124 2.459 0.449 0.861 MesoH : -0.125 0.284 -0.173 0.308 MuHd_075 : 33.643 17.188 9.308 6.203 MuHd_095 : 8.815 5.951 4.576 1.348 MuHd_100 : 20.512 9.290 6.563 3.680 MuHd_105 : 30.700 13.653 7.701 5.945 Hmax_075 : 16.217 16.683 4.557 5.588 Hmax_095 : 0.400 7.800 2.180 1.811 Hmax_100 : 2.600 8.800 2.340 2.670 Hmax_105 : 12.600 12.483 3.920 3.978 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9755 0.0245 DFMC : 0.9806 0.0194
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 538 ETH_00004860 MEALREGFGLRRLCCISAVAAFCLFGAKPSQAAASNGSQVASNPWGDSMQKFNIPYTHGSGVYVDLGNEKTVSNKKYREP 80 AGRCPVMGKEIRLQQPTTDSSIWPGNYLEKVPTKGSPQDTRPLGGGFAMWDTTPVKISPLTLSELEALAEQQRAKNDPTS 160 PASEKLAKVTDGLGLCAWWAWATYVPNGTTNLNDKYRYPFVWNEETKVCTLLGVSMQLLEGAGKYCSVGDASPVLTWYCF 240 YPEKTTRPVSYNSPYVREDHATACPEKAILGAHFGTWDGTTCQRMKAAKQITVPNPTECGKAVFKVSSSDNPTQYTKPPT 320 TEASSSTSSSNAVATMWPVGAFSKDEPRTQGVGTNYANWYTNGTCEMYDMVPTCFTLAPNQFSFTSLGSADPSTAELPPC 400 TEASEGWEIYGYCECGDGHSTPWKCENGQWIGGSDDCNCSSILPVALGVSFGLLVPIAALIAYFIYKRKKETSIAKNPEK 480 KKLLDEDEERDEEFLKVQEKRKHKQSDLAQEAEPSFWGETPQDHTNVVVDHNAHDAYY 560 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 .......................................................... 560 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00004860 5 --MEALR|EG 0.072 . ETH_00004860 11 REGFGLR|RL 0.075 . ETH_00004860 12 EGFGLRR|LC 0.095 . ETH_00004860 28 FCLFGAK|PS 0.059 . ETH_00004860 51 WGDSMQK|FN 0.069 . ETH_00004860 70 VDLGNEK|TV 0.065 . ETH_00004860 75 EKTVSNK|KY 0.057 . ETH_00004860 76 KTVSNKK|YR 0.112 . ETH_00004860 78 VSNKKYR|EP 0.103 . ETH_00004860 83 YREPAGR|CP 0.086 . ETH_00004860 89 RCPVMGK|EI 0.073 . ETH_00004860 92 VMGKEIR|LQ 0.081 . ETH_00004860 110 PGNYLEK|VP 0.063 . ETH_00004860 114 LEKVPTK|GS 0.068 . ETH_00004860 121 GSPQDTR|PL 0.173 . ETH_00004860 136 WDTTPVK|IS 0.056 . ETH_00004860 153 ALAEQQR|AK 0.081 . ETH_00004860 155 AEQQRAK|ND 0.068 . ETH_00004860 165 TSPASEK|LA 0.064 . ETH_00004860 168 ASEKLAK|VT 0.071 . ETH_00004860 195 TTNLNDK|YR 0.069 . ETH_00004860 197 NLNDKYR|YP 0.112 . ETH_00004860 207 VWNEETK|VC 0.063 . ETH_00004860 224 LLEGAGK|YC 0.074 . ETH_00004860 244 YCFYPEK|TT 0.062 . ETH_00004860 247 YPEKTTR|PV 0.135 . ETH_00004860 257 YNSPYVR|ED 0.099 . ETH_00004860 267 ATACPEK|AI 0.070 . ETH_00004860 284 DGTTCQR|MK 0.083 . ETH_00004860 286 TTCQRMK|AA 0.076 . ETH_00004860 289 QRMKAAK|QI 0.090 . ETH_00004860 301 NPTECGK|AV 0.081 . ETH_00004860 305 CGKAVFK|VS 0.065 . ETH_00004860 317 NPTQYTK|PP 0.060 . ETH_00004860 344 PVGAFSK|DE 0.061 . ETH_00004860 348 FSKDEPR|TQ 0.103 . ETH_00004860 424 GHSTPWK|CE 0.074 . ETH_00004860 467 IAYFIYK|RK 0.056 . ETH_00004860 468 AYFIYKR|KK 0.136 . ETH_00004860 469 YFIYKRK|KE 0.073 . ETH_00004860 470 FIYKRKK|ET 0.123 . ETH_00004860 476 KETSIAK|NP 0.061 . ETH_00004860 480 IAKNPEK|KK 0.061 . ETH_00004860 481 AKNPEKK|KL 0.113 . ETH_00004860 482 KNPEKKK|LL 0.112 . ETH_00004860 490 LDEDEER|DE 0.090 . ETH_00004860 496 RDEEFLK|VQ 0.060 . ETH_00004860 500 FLKVQEK|RK 0.065 . ETH_00004860 501 LKVQEKR|KH 0.193 . ETH_00004860 502 KVQEKRK|HK 0.093 . ETH_00004860 504 QEKRKHK|QS 0.176 . ____________________________^_________________

  • Fasta :-

    >ETH_00004860 ATGGAGGCTCTACGGGAAGGCTTCGGCCTGAGGCGGCTGTGCTGCATCAGTGCCGTGGCG GCATTTTGCCTATTCGGAGCAAAGCCGAGCCAAGCAGCAGCTTCTAACGGCTCACAGGTA GCTTCCAACCCATGGGGAGATTCCATGCAAAAGTTCAACATTCCATACACTCACGGTAGC GGGGTGTACGTAGACCTCGGGAACGAAAAGACAGTGAGCAACAAGAAGTACCGCGAGCCT GCGGGGCGGTGTCCTGTAATGGGTAAGGAGATACGGCTGCAGCAGCCCACGACGGACAGC TCTATATGGCCTGGGAACTACCTGGAGAAGGTGCCCACAAAGGGGTCACCTCAGGACACG CGGCCGCTGGGGGGTGGCTTCGCCATGTGGGATACGACGCCCGTCAAGATAAGCCCTTTG ACTCTGTCCGAGTTGGAGGCGCTGGCGGAGCAGCAGCGGGCCAAAAACGATCCCACCTCC CCTGCCTCGGAGAAGCTGGCGAAGGTCACTGACGGGCTGGGGCTGTGTGCGTGGTGGGCG TGGGCGACGTACGTGCCCAACGGGACTACGAACTTGAACGACAAGTACAGATACCCTTTT GTCTGGAACGAAGAAACCAAAGTGTGCACTTTGCTAGGAGTGTCCATGCAGCTGCTTGAG GGCGCGGGCAAGTACTGCTCCGTCGGCGACGCCTCCCCAGTCCTCACTTGGTACTGCTTC TACCCCGAAAAGACCACCCGGCCGGTTTCTTACAACTCTCCTTATGTGCGCGAAGACCAC GCCACGGCTTGTCCCGAAAAAGCCATTTTAGGAGCTCATTTCGGGACTTGGGACGGGACC ACTTGCCAGCGCATGAAGGCTGCGAAGCAAATAACCGTCCCCAACCCCACGGAGTGCGGC AAAGCTGTCTTCAAAGTTTCTTCTTCAGACAACCCCACGCAGTACACGAAGCCACCCACC ACTGAGGCCAGCAGCAGCACCAGCTCCAGCAACGCAGTGGCCACCATGTGGCCTGTGGGC GCCTTTTCCAAGGACGAACCCCGCACGCAGGGGGTGGGCACCAACTATGCCAACTGGTAC ACCAATGGTACTTGTGAGATGTATGACATGGTCCCCACTTGCTTCACCCTCGCCCCTAAC CAGTTCTCGTTCACATCCCTGGGATCGGCCGATCCCAGCACCGCCGAGCTGCCCCCCTGC ACCGAAGCCAGCGAGGGCTGGGAAATCTACGGCTACTGCGAGTGCGGAGACGGCCACTCG ACGCCCTGGAAGTGTGAGAACGGCCAGTGGATTGGCGGCAGCGACGACTGCAACTGCAGC AGCATCCTTCCCGTGGCCCTGGGCGTTAGCTTCGGCCTGCTTGTGCCGATTGCCGCTCTT ATCGCCTACTTCATCTACAAAAGAAAAAAAGAAACCAGCATCGCAAAGAACCCTGAGAAG AAAAAGCTGCTGGACGAAGACGAGGAGAGGGATGAGGAGTTCTTGAAAGTGCAGGAGAAG AGGAAGCACAAACAAAGTGATTTGGCCCAAGAGGCCGAGCCTTCATTCTGGGGCGAAACT CCCCAGGACCACACAAACGTTGTGGTCGACCACAACGCCCACGACGCCTACTACTAA
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  • Fasta :-

    No Results
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IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_00004860163 STSPASEKLA0.993unspETH_00004860163 STSPASEKLA0.993unspETH_00004860163 STSPASEKLA0.993unspETH_00004860245 TYPEKTTRPV0.992unspETH_00004860250 STRPVSYNSP0.994unspETH_00004860307 SVFKVSSSDN0.994unspETH_00004860328 SSSSTSSSNA0.99unspETH_00004860343 SVGAFSKDEP0.992unspETH_00004860116 SPTKGSPQDT0.994unspETH_00004860160 SNDPTSPASE0.995unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India