ETH_00004990 | ubiquitin carboxyl-terminal hydrolase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0003677      

  • Computed_GO_Functions:  DNA binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
ETH_00004990OTHER0.5128980.4106650.076437
No Results

  • Fasta :-

    >ETH_00004990 MFVRTSSSSCWRKTLDELFLSSPLLRGRWNSHLVRILRGFFLLCLFESAAAEPPTADNPN SVIQIDFSRRLADVDIPECARNQIVYTTMADYEIASLLPQRSSSGLYMLDRLEHFLSETP EADPDKVPLSGDSSQDATKTKCEMPTLLSHELHVGSPELQSYLRAARLRWLLDRCFRFSD VGVDDWRYELCIGRKVTLFKSSALTGKTVGKNLFELGTYASSMDQLWADGTMTQWYTGGT EGRQTEVRFVCGDTHPRVKGISGPQNGKYRVWLEAPMFCDYRENAREPALTESLIRSLEG WCSTFTTDGWWSYEYCHPDSLVEYHKEPDGEVKGPLHLLGTLHASGDAAELIFKRPDPAN PTLRGTDTLPPRANGAPRFKFLPVEIIDKPKQFSKSPTPASSKVLALQLTNGTVCEGTDK QRSARVLFECPVDFPVLATHRIVQIEETSFCTYDLLIHTPLVCPHPKLLPPRPLDAQAVL GYPVRRTFTYTITPASWKGLDAVDNAEETMGQTPTKEATNEQPVEAHLEALPKEAVEVLA EGRNLDSFGLAKYIRKRVSVEEPKFKVGEIVRHRWWQYTAVVLSWDTSCMANNDWSSKAG LEAVSKNISEVSHPDINKYFKVGQCLPVQCGPYEKLRRRQRIEDGAFHF
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00004990.fa Sequence name : ETH_00004990 Sequence length : 649 VALUES OF COMPUTED PARAMETERS Coef20 : 4.875 CoefTot : 0.727 ChDiff : -7 ZoneTo : 15 KR : 3 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.759 1.571 0.085 0.482 MesoH : -0.569 0.288 -0.332 0.193 MuHd_075 : 28.321 9.619 7.895 4.605 MuHd_095 : 34.583 19.671 9.392 7.380 MuHd_100 : 18.332 11.185 5.326 3.931 MuHd_105 : 13.817 5.636 1.918 2.080 Hmax_075 : 13.883 7.000 2.660 3.045 Hmax_095 : 13.900 11.900 2.696 4.170 Hmax_100 : 2.900 4.900 0.387 2.330 Hmax_105 : 0.875 1.700 -1.884 0.647 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.4833 0.5167 DFMC : 0.5730 0.4270
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 649 ETH_00004990 MFVRTSSSSCWRKTLDELFLSSPLLRGRWNSHLVRILRGFFLLCLFESAAAEPPTADNPNSVIQIDFSRRLADVDIPECA 80 RNQIVYTTMADYEIASLLPQRSSSGLYMLDRLEHFLSETPEADPDKVPLSGDSSQDATKTKCEMPTLLSHELHVGSPELQ 160 SYLRAARLRWLLDRCFRFSDVGVDDWRYELCIGRKVTLFKSSALTGKTVGKNLFELGTYASSMDQLWADGTMTQWYTGGT 240 EGRQTEVRFVCGDTHPRVKGISGPQNGKYRVWLEAPMFCDYRENAREPALTESLIRSLEGWCSTFTTDGWWSYEYCHPDS 320 LVEYHKEPDGEVKGPLHLLGTLHASGDAAELIFKRPDPANPTLRGTDTLPPRANGAPRFKFLPVEIIDKPKQFSKSPTPA 400 SSKVLALQLTNGTVCEGTDKQRSARVLFECPVDFPVLATHRIVQIEETSFCTYDLLIHTPLVCPHPKLLPPRPLDAQAVL 480 GYPVRRTFTYTITPASWKGLDAVDNAEETMGQTPTKEATNEQPVEAHLEALPKEAVEVLAEGRNLDSFGLAKYIRKRVSV 560 EEPKFKVGEIVRHRWWQYTAVVLSWDTSCMANNDWSSKAGLEAVSKNISEVSHPDINKYFKVGQCLPVQCGPYEKLRRRQ 640 RIEDGAFHF 720 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ......... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00004990 4 ---MFVR|TS 0.087 . ETH_00004990 12 SSSSCWR|KT 0.126 . ETH_00004990 13 SSSCWRK|TL 0.130 . ETH_00004990 26 LSSPLLR|GR 0.092 . ETH_00004990 28 SPLLRGR|WN 0.097 . ETH_00004990 35 WNSHLVR|IL 0.098 . ETH_00004990 38 HLVRILR|GF 0.157 . ETH_00004990 69 IQIDFSR|RL 0.083 . ETH_00004990 70 QIDFSRR|LA 0.142 . ETH_00004990 81 DIPECAR|NQ 0.072 . ETH_00004990 101 ASLLPQR|SS 0.114 . ETH_00004990 111 GLYMLDR|LE 0.074 . ETH_00004990 126 PEADPDK|VP 0.059 . ETH_00004990 139 SSQDATK|TK 0.065 . ETH_00004990 141 QDATKTK|CE 0.075 . ETH_00004990 164 ELQSYLR|AA 0.072 . ETH_00004990 167 SYLRAAR|LR 0.124 . ETH_00004990 169 LRAARLR|WL 0.106 . ETH_00004990 174 LRWLLDR|CF 0.090 . ETH_00004990 177 LLDRCFR|FS 0.366 . ETH_00004990 187 VGVDDWR|YE 0.075 . ETH_00004990 194 YELCIGR|KV 0.081 . ETH_00004990 195 ELCIGRK|VT 0.063 . ETH_00004990 200 RKVTLFK|SS 0.095 . ETH_00004990 207 SSALTGK|TV 0.125 . ETH_00004990 211 TGKTVGK|NL 0.074 . ETH_00004990 243 TGGTEGR|QT 0.118 . ETH_00004990 248 GRQTEVR|FV 0.182 . ETH_00004990 257 CGDTHPR|VK 0.101 . ETH_00004990 259 DTHPRVK|GI 0.080 . ETH_00004990 268 SGPQNGK|YR 0.057 . ETH_00004990 270 PQNGKYR|VW 0.103 . ETH_00004990 282 PMFCDYR|EN 0.075 . ETH_00004990 286 DYRENAR|EP 0.071 . ETH_00004990 296 LTESLIR|SL 0.143 . ETH_00004990 326 SLVEYHK|EP 0.067 . ETH_00004990 333 EPDGEVK|GP 0.068 . ETH_00004990 354 AAELIFK|RP 0.061 . ETH_00004990 355 AELIFKR|PD 0.117 . ETH_00004990 364 PANPTLR|GT 0.126 . ETH_00004990 372 TDTLPPR|AN 0.106 . ETH_00004990 378 RANGAPR|FK 0.105 . ETH_00004990 380 NGAPRFK|FL 0.071 . ETH_00004990 389 PVEIIDK|PK 0.054 . ETH_00004990 391 EIIDKPK|QF 0.075 . ETH_00004990 395 KPKQFSK|SP 0.085 . ETH_00004990 403 PTPASSK|VL 0.057 . ETH_00004990 420 VCEGTDK|QR 0.059 . ETH_00004990 422 EGTDKQR|SA 0.141 . ETH_00004990 425 DKQRSAR|VL 0.352 . ETH_00004990 441 PVLATHR|IV 0.120 . ETH_00004990 467 LVCPHPK|LL 0.063 . ETH_00004990 472 PKLLPPR|PL 0.108 . ETH_00004990 485 VLGYPVR|RT 0.089 . ETH_00004990 486 LGYPVRR|TF 0.122 . ETH_00004990 498 ITPASWK|GL 0.079 . ETH_00004990 516 MGQTPTK|EA 0.086 . ETH_00004990 533 HLEALPK|EA 0.075 . ETH_00004990 543 EVLAEGR|NL 0.076 . ETH_00004990 552 DSFGLAK|YI 0.072 . ETH_00004990 555 GLAKYIR|KR 0.086 . ETH_00004990 556 LAKYIRK|RV 0.123 . ETH_00004990 557 AKYIRKR|VS 0.144 . ETH_00004990 564 VSVEEPK|FK 0.066 . ETH_00004990 566 VEEPKFK|VG 0.069 . ETH_00004990 572 KVGEIVR|HR 0.081 . ETH_00004990 574 GEIVRHR|WW 0.082 . ETH_00004990 598 NNDWSSK|AG 0.058 . ETH_00004990 606 GLEAVSK|NI 0.068 . ETH_00004990 618 SHPDINK|YF 0.066 . ETH_00004990 621 DINKYFK|VG 0.059 . ETH_00004990 635 QCGPYEK|LR 0.056 . ETH_00004990 637 GPYEKLR|RR 0.104 . ETH_00004990 638 PYEKLRR|RQ 0.103 . ETH_00004990 639 YEKLRRR|QR 0.106 . ETH_00004990 641 KLRRRQR|IE 0.369 . ____________________________^_________________

  • Fasta :-

    >ETH_00004990 ATGTTTGTCCGCACCAGCAGTAGCAGCTGCTGGAGGAAGACCCTCGACGAGTTGTTTCTC TCAAGCCCACTCCTGAGAGGACGCTGGAACTCGCATCTGGTGCGGATATTGCGTGGTTTT TTCCTACTATGCTTGTTTGAATCAGCTGCAGCAGAGCCGCCGACTGCTGACAATCCCAAC AGCGTCATTCAGATAGACTTCTCGAGGCGGCTAGCTGACGTAGATATCCCAGAGTGCGCT CGTAACCAGATTGTGTACACAACAATGGCAGACTATGAAATTGCATCTTTACTGCCACAG CGGTCTTCATCAGGTCTTTACATGTTAGATAGGCTGGAGCATTTCCTATCAGAGACTCCA GAAGCAGACCCCGACAAAGTGCCACTATCCGGGGATTCATCTCAAGATGCAACCAAAACA AAATGTGAAATGCCAACTCTGCTTTCTCATGAGCTCCACGTCGGCAGCCCGGAGCTTCAG AGCTACTTGCGCGCTGCGCGACTGCGTTGGCTATTGGACAGATGTTTTCGATTTTCGGAT GTCGGCGTTGACGACTGGCGCTATGAGCTATGTATCGGGCGGAAGGTGACCCTATTCAAA AGCAGCGCGCTTACTGGGAAGACAGTTGGGAAAAACCTTTTTGAGCTAGGCACATATGCT TCTTCAATGGATCAGCTGTGGGCGGATGGCACAATGACGCAGTGGTACACTGGGGGCACG GAGGGCCGGCAAACGGAAGTCCGGTTTGTGTGCGGCGACACGCACCCGCGAGTGAAGGGA ATATCAGGTCCACAGAATGGAAAATATCGCGTGTGGTTGGAGGCCCCCATGTTCTGTGAC TACCGCGAGAATGCGCGTGAACCTGCCTTAACTGAATCCCTGATTCGGAGCCTTGAGGGT TGGTGCTCAACTTTCACCACCGACGGCTGGTGGTCATACGAATATTGCCATCCGGACAGT TTAGTGGAGTATCACAAGGAGCCAGACGGTGAAGTGAAGGGCCCATTGCATCTTTTGGGA ACGTTGCATGCTTCTGGGGACGCAGCGGAACTAATTTTTAAACGACCAGATCCGGCAAAC CCAACGTTGAGGGGCACGGATACTCTACCTCCTAGGGCGAATGGAGCTCCTCGATTTAAG TTCTTGCCTGTGGAGATCATTGACAAACCAAAGCAATTCTCAAAGAGCCCAACACCAGCA TCTAGCAAAGTCTTGGCGCTCCAGCTTACAAATGGGACCGTTTGTGAAGGTACAGACAAG CAACGCAGCGCTAGAGTTCTCTTTGAGTGTCCAGTTGATTTTCCAGTGTTGGCGACGCAC CGCATTGTGCAAATTGAAGAGACGTCGTTTTGCACGTACGACCTTCTCATTCACACGCCG CTTGTCTGCCCTCATCCCAAACTGCTGCCCCCACGGCCTCTCGATGCTCAGGCAGTCTTG GGATATCCAGTGAGGAGAACCTTTACCTACACGATAACGCCTGCTAGTTGGAAGGGCCTG GATGCTGTTGATAACGCTGAAGAGACTATGGGACAGACCCCGACAAAAGAAGCAACTAAC GAGCAGCCCGTCGAAGCTCACCTGGAGGCTTTGCCCAAAGAAGCTGTAGAAGTGCTCGCA GAGGGGCGCAATCTAGACTCGTTTGGCTTGGCGAAGTATATACGCAAACGGGTGTCAGTG GAAGAACCGAAGTTCAAAGTTGGCGAAATAGTGAGACACCGCTGGTGGCAGTACACTGCG GTTGTTCTCTCCTGGGACACTTCTTGCATGGCGAATAATGACTGGTCCAGCAAGGCAGGG TTGGAGGCCGTCTCAAAGAACATTTCCGAAGTGTCCCATCCAGATATTAATAAATATTTC AAGGTAGGTCAGTGTCTGCCAGTGCAGTGCGGCCCATATGAGAAACTGCGGAGGCGGCAG CGTATTGAAGACGGGGCCTTCCACTTCTAA
  • Download Fasta

  • Fasta :-

    MFVRTSSSSCWRKTLDELFLSSPLLRGRWNSHLVRILRGFFLLCLFESAAAEPPTADNPN SVIQIDFSRRLADVDIPECARNQIVYTTMADYEIASLLPQRSSSGLYMLDRLEHFLSETP EADPDKVPLSGDSSQDATKTKCEMPTLLSHELHVGSPELQSYLRAARLRWLLDRCFRFSD VGVDDWRYELCIGRKVTLFKSSALTGKTVGKNLFELGTYASSMDQLWADGTMTQWYTGGT EGRQTEVRFVCGDTHPRVKGISGPQNGKYRVWLEAPMFCDYRENAREPALTESLIRSLEG WCSTFTTDGWWSYEYCHPDSLVEYHKEPDGEVKGPLHLLGTLHASGDAAELIFKRPDPAN PTLRGTDTLPPRANGAPRFKFLPVEIIDKPKQFSKSPTPASSKVLALQLTNGTVCEGTDK QRSARVLFECPVDFPVLATHRIVQIEETSFCTYDLLIHTPLVCPHPKLLPPRPLDAQAVL GYPVRRTFTYTITPASWKGLDAVDNAEETMGQTPTKEATNEQPVEAHLEALPKEAVEVLA EGRNLDSFGLAKYIRKRVSVEEPKFKVGEIVRHRWWQYTAVVLSWDTSCMANNDWSSKAG LEAVSKNISEVSHPDINKYFKVGQCLPVQCGPYEKLRRRQRIEDGAFHF

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_00004990559 SRKRVSVEEP0.998unspETH_00004990559 SRKRVSVEEP0.998unspETH_00004990559 SRKRVSVEEP0.998unspETH_00004990396 SQFSKSPTPA0.993unspETH_00004990496 SITPASWKGL0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India