ETH_00005260 | der1-like family domain-containing protein, conserved, putative

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_IDPredictionOTHERSPmTPCS_Position
ETH_00005260OTHER0.9999060.0000230.000072
No Results

  • Fasta :-

    >ETH_00005260 MEAGMGGLRGLERGPEVWWRSLPGVTRAAAAASLLLALLASTSLLPPRLLLLDWQLLLLR LQLWRLLSAALFVGPFSLPFLFHIYLFISVSAALEANPVFAAAAKGSYLLFLLFANFFVA LLGLLVFWPTGLYFHGEGLLFACLYYWSRREALSPVSVSFLTVSGYQLPYLLLLLHLLMG RDLWLDLFGLAAGHAYYFFREVLPANGGPDLLSEPPKFLGTITSWLENGGPPGGPPEGPP GGAPRRGPPGGAPQDAAAAGGESGGPWGFGMRQRGAPGTRPFTGRGYTLGGAS
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00005260.fa Sequence name : ETH_00005260 Sequence length : 293 VALUES OF COMPUTED PARAMETERS Coef20 : 3.373 CoefTot : 0.000 ChDiff : 3 ZoneTo : 1 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.347 2.700 0.366 0.926 MesoH : 1.434 1.598 0.105 0.658 MuHd_075 : 16.950 2.985 3.674 2.815 MuHd_095 : 34.953 10.258 8.211 7.161 MuHd_100 : 45.603 16.431 10.528 8.864 MuHd_105 : 49.251 21.074 11.398 9.509 Hmax_075 : 13.300 6.067 0.891 4.037 Hmax_095 : 10.900 6.100 0.507 4.710 Hmax_100 : 12.700 7.700 1.216 5.070 Hmax_105 : 13.900 8.200 2.251 5.090 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8495 0.1505 DFMC : 0.8714 0.1286
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 293 ETH_00005260 MEAGMGGLRGLERGPEVWWRSLPGVTRAAAAASLLLALLASTSLLPPRLLLLDWQLLLLRLQLWRLLSAALFVGPFSLPF 80 LFHIYLFISVSAALEANPVFAAAAKGSYLLFLLFANFFVALLGLLVFWPTGLYFHGEGLLFACLYYWSRREALSPVSVSF 160 LTVSGYQLPYLLLLLHLLMGRDLWLDLFGLAAGHAYYFFREVLPANGGPDLLSEPPKFLGTITSWLENGGPPGGPPEGPP 240 GGAPRRGPPGGAPQDAAAAGGESGGPWGFGMRQRGAPGTRPFTGRGYTLGGAS 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ..................................................... 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00005260 9 AGMGGLR|GL 0.091 . ETH_00005260 13 GLRGLER|GP 0.101 . ETH_00005260 20 GPEVWWR|SL 0.201 . ETH_00005260 27 SLPGVTR|AA 0.096 . ETH_00005260 48 TSLLPPR|LL 0.072 . ETH_00005260 60 WQLLLLR|LQ 0.062 . ETH_00005260 65 LRLQLWR|LL 0.108 . ETH_00005260 105 VFAAAAK|GS 0.063 . ETH_00005260 149 CLYYWSR|RE 0.067 . ETH_00005260 150 LYYWSRR|EA 0.116 . ETH_00005260 181 LHLLMGR|DL 0.084 . ETH_00005260 200 HAYYFFR|EV 0.154 . ETH_00005260 217 LLSEPPK|FL 0.139 . ETH_00005260 245 PPGGAPR|RG 0.095 . ETH_00005260 246 PGGAPRR|GP 0.152 . ETH_00005260 272 PWGFGMR|QR 0.090 . ETH_00005260 274 GFGMRQR|GA 0.139 . ETH_00005260 280 RGAPGTR|PF 0.092 . ETH_00005260 285 TRPFTGR|GY 0.163 . ____________________________^_________________

  • Fasta :-

    >ETH_00005260 ATGGAGGCGGGGATGGGGGGCCTGCGGGGCCTCGAGCGGGGCCCCGAGGTTTGGTGGAGG TCTTTGCCGGGAGTGACTCGTGCTGCAGCAGCAGCAAGTTTGCTGCTGGCGCTGCTGGCG TCGACGAGTTTGCTGCCGCCGCGGCTGCTGCTGCTGGACTGGCAGCTGCTGCTGCTGCGG CTGCAGCTGTGGCGGCTGCTGTCTGCTGCACTCTTTGTGGGGCCCTTTTCCTTGCCATTC CTTTTCCACATTTATCTTTTCATTTCCGTCAGTGCAGCACTCGAAGCAAACCCCGTTTTT GCTGCTGCTGCTAAAGGCAGCTATTTGCTGTTTCTCCTCTTCGCCAACTTCTTTGTTGCG CTCCTCGGCCTCCTCGTCTTCTGGCCCACAGGGCTGTACTTTCACGGGGAAGGGCTGCTG TTTGCGTGTCTGTACTACTGGTCCCGGCGCGAAGCTTTGTCTCCTGTCTCTGTTTCTTTC TTAACTGTCTCTGGCTACCAGCTGCCTTATTTGCTGCTGCTGCTGCACCTGCTGATGGGT CGCGACTTGTGGCTGGACCTTTTCGGCTTGGCAGCAGGCCACGCCTACTACTTCTTCAGA GAAGTTCTCCCTGCAAACGGAGGCCCTGACCTCTTATCTGAACCCCCAAAGTTCCTTGGC ACTATTACCTCTTGGCTGGAGAATGGGGGGCCCCCCGGGGGGCCCCCCGAGGGGCCCCCC GGGGGGGCCCCCCGAAGGGGGCCCCCCGGGGGGGCCCCCCAAGATGCTGCAGCAGCTGGG GGAGAGTCTGGGGGCCCCTGGGGTTTCGGAATGAGGCAAAGGGGGGCCCCTGGGACTCGG CCTTTTACGGGAAGGGGTTACACCCTGGGAGGCGCCAGCTAG
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  • Fasta :-

    MEAGMGGLRGLERGPEVWWRSLPGVTRAAAAASLLLALLASTSLLPPRLLLLDWQLLLLR LQLWRLLSAALFVGPFSLPFLFHIYLFISVSAALEANPVFAAAAKGSYLLFLLFANFFVA LLGLLVFWPTGLYFHGEGLLFACLYYWSRREALSPVSVSFLTVSGYQLPYLLLLLHLLMG RDLWLDLFGLAAGHAYYFFREVLPANGGPDLLSEPPKFLGTITSWLENGGPPGGPPEGPP GGAPRRGPPGGAPQDAAAAGGESGGPWGFGMRQRGAPGTRPFTGRGYTLGGAS

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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India