ETH_00005505 | hypothetical protein, conserved

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_IDPredictionOTHERSPmTPCS_Position
ETH_00005505OTHER0.9901340.0003840.009481
No Results

  • Fasta :-

    >ETH_00005505 MMRAVATGPNSIPVSHELGNQLLRTAGGADKSDERAEGTPPLPETRRESGSESTLSEETP DATINSSRKSAETIEDGYRSDAREIVPHWWRETCTKESYDQAGALCCAGATAVLRVELAG SPCEALLDTAASRSFISFKIVERLPLKVRRLPKEHRFTIATVGTVPYDVVLGLDWLTEHK VAWYFQSNKLRTYVNGQWCGSKAKARITSLVRQAAADTNDLRTPLHGLHLILALPEACSA VPLRLSDEWQGALCCASIGNQPTSFGCRSPLASIASVAAESDEESPWPTAKLEHTLFDEW INSTAAQDIPCYSFTE
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00005505.fa Sequence name : ETH_00005505 Sequence length : 316 VALUES OF COMPUTED PARAMETERS Coef20 : 3.597 CoefTot : -0.488 ChDiff : -9 ZoneTo : 16 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.171 1.441 0.228 0.595 MesoH : -0.368 0.480 -0.244 0.198 MuHd_075 : 15.364 7.905 3.851 2.326 MuHd_095 : 14.653 4.289 3.531 3.719 MuHd_100 : 28.465 14.411 7.329 5.408 MuHd_105 : 35.115 21.780 9.412 6.996 Hmax_075 : 10.733 12.600 1.668 4.853 Hmax_095 : 9.300 8.000 -0.053 3.960 Hmax_100 : 13.100 10.400 2.017 3.980 Hmax_105 : 13.900 9.800 1.705 4.200 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9627 0.0373 DFMC : 0.9224 0.0776
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 316 ETH_00005505 MMRAVATGPNSIPVSHELGNQLLRTAGGADKSDERAEGTPPLPETRRESGSESTLSEETPDATINSSRKSAETIEDGYRS 80 DAREIVPHWWRETCTKESYDQAGALCCAGATAVLRVELAGSPCEALLDTAASRSFISFKIVERLPLKVRRLPKEHRFTIA 160 TVGTVPYDVVLGLDWLTEHKVAWYFQSNKLRTYVNGQWCGSKAKARITSLVRQAAADTNDLRTPLHGLHLILALPEACSA 240 VPLRLSDEWQGALCCASIGNQPTSFGCRSPLASIASVAAESDEESPWPTAKLEHTLFDEWINSTAAQDIPCYSFTE 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ............................................................................ 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00005505 3 ----MMR|AV 0.168 . ETH_00005505 24 LGNQLLR|TA 0.125 . ETH_00005505 31 TAGGADK|SD 0.104 . ETH_00005505 35 ADKSDER|AE 0.077 . ETH_00005505 46 PPLPETR|RE 0.106 . ETH_00005505 47 PLPETRR|ES 0.127 . ETH_00005505 68 ATINSSR|KS 0.087 . ETH_00005505 69 TINSSRK|SA 0.356 . ETH_00005505 79 TIEDGYR|SD 0.099 . ETH_00005505 83 GYRSDAR|EI 0.098 . ETH_00005505 91 IVPHWWR|ET 0.107 . ETH_00005505 96 WRETCTK|ES 0.074 . ETH_00005505 115 GATAVLR|VE 0.074 . ETH_00005505 133 LDTAASR|SF 0.093 . ETH_00005505 139 RSFISFK|IV 0.088 . ETH_00005505 143 SFKIVER|LP 0.075 . ETH_00005505 147 VERLPLK|VR 0.052 . ETH_00005505 149 RLPLKVR|RL 0.078 . ETH_00005505 150 LPLKVRR|LP 0.146 . ETH_00005505 153 KVRRLPK|EH 0.139 . ETH_00005505 156 RLPKEHR|FT 0.122 . ETH_00005505 180 DWLTEHK|VA 0.058 . ETH_00005505 189 WYFQSNK|LR 0.058 . ETH_00005505 191 FQSNKLR|TY 0.128 . ETH_00005505 202 GQWCGSK|AK 0.062 . ETH_00005505 204 WCGSKAK|AR 0.073 . ETH_00005505 206 GSKAKAR|IT 0.162 . ETH_00005505 212 RITSLVR|QA 0.081 . ETH_00005505 222 ADTNDLR|TP 0.079 . ETH_00005505 244 CSAVPLR|LS 0.116 . ETH_00005505 268 PTSFGCR|SP 0.139 . ETH_00005505 291 SPWPTAK|LE 0.073 . ____________________________^_________________

  • Fasta :-

    >ETH_00005505 ATGATGCGTGCGGTAGCGACAGGCCCTAACTCCATTCCAGTCTCCCACGAGTTGGGAAAC CAACTCCTCCGCACTGCGGGAGGGGCTGATAAGAGCGACGAGCGCGCGGAAGGGACTCCG CCGCTTCCGGAAACGCGACGGGAGTCTGGGTCAGAGTCGACCCTGAGTGAAGAGACTCCG GACGCGACGATAAATAGCAGCAGGAAGTCTGCGGAGACAATAGAAGACGGCTATAGGTCA GACGCGAGAGAGATTGTCCCACACTGGTGGAGGGAGACTTGCACGAAAGAGTCTTACGAT CAAGCGGGAGCGTTGTGTTGTGCGGGCGCGACGGCGGTACTTCGCGTTGAGCTCGCAGGG AGCCCTTGTGAGGCCCTGTTGGACACTGCGGCTTCGAGAAGTTTCATTAGTTTTAAAATA GTCGAACGACTGCCTCTGAAAGTGCGGAGACTACCAAAAGAACATAGGTTCACCATTGCT ACAGTGGGAACCGTTCCCTACGACGTAGTCTTGGGTTTGGATTGGCTGACGGAACACAAG GTGGCCTGGTATTTCCAATCAAACAAACTCCGAACCTATGTGAATGGCCAGTGGTGCGGG TCTAAGGCGAAGGCGCGGATAACGTCGCTGGTTCGTCAGGCGGCGGCCGACACAAATGAT CTCAGGACTCCATTGCACGGTTTGCATCTCATACTGGCTTTGCCCGAAGCCTGTTCGGCA GTGCCCTTAAGGCTCTCGGATGAATGGCAAGGCGCGCTTTGTTGCGCGTCGATTGGGAAT CAACCCACGTCCTTCGGCTGCCGTAGTCCTTTGGCCTCAATCGCTTCGGTGGCAGCGGAG AGTGACGAGGAGTCTCCTTGGCCTACGGCAAAACTCGAGCACACTCTATTCGACGAATGG ATAAATTCGACAGCGGCGCAGGATATTCCATGTTACAGCTTCACCGAGTAG
  • Download Fasta

  • Fasta :-

    MMRAVATGPNSIPVSHELGNQLLRTAGGADKSDERAEGTPPLPETRRESGSESTLSEETP DATINSSRKSAETIEDGYRSDAREIVPHWWRETCTKESYDQAGALCCAGATAVLRVELAG SPCEALLDTAASRSFISFKIVERLPLKVRRLPKEHRFTIATVGTVPYDVVLGLDWLTEHK VAWYFQSNKLRTYVNGQWCGSKAKARITSLVRQAAADTNDLRTPLHGLHLILALPEACSA VPLRLSDEWQGALCCASIGNQPTSFGCRSPLASIASVAAESDEESPWPTAKLEHTLFDEW INSTAAQDIPCYSFTE

  • title: inhibitor binding site
  • coordinates: D128,A130,S132,F157,T158,I159,V170
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_0000550556 SESTLSEETP0.993unspETH_0000550556 SESTLSEETP0.993unspETH_0000550556 SESTLSEETP0.993unspETH_0000550570 SSSRKSAETI0.996unspETH_00005505281 SVAAESDEES0.997unspETH_0000550532 SGADKSDERA0.994unspETH_0000550549 STRRESGSES0.998unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India