ETH_00005615 | WD domain, G-beta repeat-containing protein, putative

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No Results
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  • Fasta :-

    >ETH_00005615 MYERKLLEVQKEKIKVRGQAGVYRQQYEDAAEEFQQLKEATRAKEEKFSRLKEDLEKLLQ DRSQLQQQLKEKEEALGEKEKKIYLLRQQQQSFEKQNYILGYKLQQLQQTAGPQQQQLQE MQQQIKCMDRELVCCQQQQQQQQQQQQKLQRLLLAARQQQQQQQQQTKQKQKVINNLSWG VCKCLQQIDNPKELKRDLLLLYRSSGAAAAAAAAAKPPNEDAAAEQTRQQQHLEAAIKQL KKRISKDAKTHREDNSKLMKENADLIKEINSLRAEVLSLQAAKRGLKAANRNASSSSSSS SSSSGGGGGGLGAAAAAAVAAAAAAEEAKAAAATQPAAAAAAAEAPPATDAAAAAAAAEA AAEGSVAAECAKLIDEQQKEMEKMKSKFGDNSEDN
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00005615.fa Sequence name : ETH_00005615 Sequence length : 395 VALUES OF COMPUTED PARAMETERS Coef20 : 3.591 CoefTot : -0.157 ChDiff : 8 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.624 1.671 0.296 0.652 MesoH : 0.355 0.678 -0.103 0.351 MuHd_075 : 23.819 11.034 4.098 3.294 MuHd_095 : 19.276 8.813 5.286 3.681 MuHd_100 : 14.480 9.184 4.605 2.993 MuHd_105 : 15.484 10.424 4.718 3.852 Hmax_075 : -14.467 0.438 -5.661 -0.472 Hmax_095 : -10.587 0.438 -4.387 1.094 Hmax_100 : -14.900 0.200 -4.628 0.120 Hmax_105 : -11.317 4.083 -4.385 1.540 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9677 0.0323 DFMC : 0.9667 0.0333
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 395 ETH_00005615 MYERKLLEVQKEKIKVRGQAGVYRQQYEDAAEEFQQLKEATRAKEEKFSRLKEDLEKLLQDRSQLQQQLKEKEEALGEKE 80 KKIYLLRQQQQSFEKQNYILGYKLQQLQQTAGPQQQQLQEMQQQIKCMDRELVCCQQQQQQQQQQQQKLQRLLLAARQQQ 160 QQQQQQTKQKQKVINNLSWGVCKCLQQIDNPKELKRDLLLLYRSSGAAAAAAAAAKPPNEDAAAEQTRQQQHLEAAIKQL 240 KKRISKDAKTHREDNSKLMKENADLIKEINSLRAEVLSLQAAKRGLKAANRNASSSSSSSSSSSGGGGGGLGAAAAAAVA 320 AAAAAEEAKAAAATQPAAAAAAAEAPPATDAAAAAAAAEAAAEGSVAAECAKLIDEQQKEMEKMKSKFGDNSEDN 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ........................................................................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00005615 4 ---MYER|KL 0.081 . ETH_00005615 5 --MYERK|LL 0.090 . ETH_00005615 11 KLLEVQK|EK 0.071 . ETH_00005615 13 LEVQKEK|IK 0.065 . ETH_00005615 15 VQKEKIK|VR 0.067 . ETH_00005615 17 KEKIKVR|GQ 0.123 . ETH_00005615 24 GQAGVYR|QQ 0.091 . ETH_00005615 38 EEFQQLK|EA 0.064 . ETH_00005615 42 QLKEATR|AK 0.095 . ETH_00005615 44 KEATRAK|EE 0.062 . ETH_00005615 47 TRAKEEK|FS 0.101 . ETH_00005615 50 KEEKFSR|LK 0.106 . ETH_00005615 52 EKFSRLK|ED 0.056 . ETH_00005615 57 LKEDLEK|LL 0.058 . ETH_00005615 62 EKLLQDR|SQ 0.105 . ETH_00005615 70 QLQQQLK|EK 0.076 . ETH_00005615 72 QQQLKEK|EE 0.067 . ETH_00005615 79 EEALGEK|EK 0.059 . ETH_00005615 81 ALGEKEK|KI 0.067 . ETH_00005615 82 LGEKEKK|IY 0.092 . ETH_00005615 87 KKIYLLR|QQ 0.089 . ETH_00005615 95 QQQSFEK|QN 0.066 . ETH_00005615 103 NYILGYK|LQ 0.054 . ETH_00005615 126 EMQQQIK|CM 0.069 . ETH_00005615 130 QIKCMDR|EL 0.088 . ETH_00005615 148 QQQQQQK|LQ 0.063 . ETH_00005615 151 QQQKLQR|LL 0.105 . ETH_00005615 157 RLLLAAR|QQ 0.096 . ETH_00005615 168 QQQQQTK|QK 0.080 . ETH_00005615 170 QQQTKQK|QK 0.069 . ETH_00005615 172 QTKQKQK|VI 0.065 . ETH_00005615 183 LSWGVCK|CL 0.077 . ETH_00005615 192 QQIDNPK|EL 0.062 . ETH_00005615 195 DNPKELK|RD 0.052 . ETH_00005615 196 NPKELKR|DL 0.184 . ETH_00005615 203 DLLLLYR|SS 0.109 . ETH_00005615 216 AAAAAAK|PP 0.062 . ETH_00005615 228 AAAEQTR|QQ 0.112 . ETH_00005615 238 HLEAAIK|QL 0.061 . ETH_00005615 241 AAIKQLK|KR 0.056 . ETH_00005615 242 AIKQLKK|RI 0.116 . ETH_00005615 243 IKQLKKR|IS 0.278 . ETH_00005615 246 LKKRISK|DA 0.229 . ETH_00005615 249 RISKDAK|TH 0.068 . ETH_00005615 252 KDAKTHR|ED 0.106 . ETH_00005615 257 HREDNSK|LM 0.060 . ETH_00005615 260 DNSKLMK|EN 0.071 . ETH_00005615 267 ENADLIK|EI 0.066 . ETH_00005615 273 KEINSLR|AE 0.075 . ETH_00005615 283 LSLQAAK|RG 0.058 . ETH_00005615 284 SLQAAKR|GL 0.254 . ETH_00005615 287 AAKRGLK|AA 0.113 . ETH_00005615 291 GLKAANR|NA 0.099 . ETH_00005615 329 AAAEEAK|AA 0.089 . ETH_00005615 372 VAAECAK|LI 0.080 . ETH_00005615 379 LIDEQQK|EM 0.066 . ETH_00005615 383 QQKEMEK|MK 0.066 . ETH_00005615 385 KEMEKMK|SK 0.088 . ETH_00005615 387 MEKMKSK|FG 0.085 . ____________________________^_________________

  • Fasta :-

    >ETH_00005615 ATGTACGAAAGAAAACTTTTGGAAGTTCAAAAAGAAAAAATAAAAGTGCGGGGCCAAGCT GGGGTGTACAGACAGCAGTATGAAGATGCAGCAGAAGAATTTCAGCAGCTAAAAGAAGCC ACGAGAGCAAAAGAAGAAAAGTTCTCCAGACTCAAAGAGGACCTGGAAAAGCTGCTGCAG GACCGTTCGCAGCTGCAGCAGCAGCTGAAGGAAAAAGAAGAAGCTTTAGGAGAAAAAGAA AAGAAGATTTATTTGCTGCGGCAGCAGCAGCAAAGTTTTGAGAAGCAAAACTACATATTA GGGTATAAGCTGCAGCAGCTGCAGCAAACCGCGGGGCCGCAGCAGCAGCAGCTGCAGGAG ATGCAGCAGCAGATCAAGTGCATGGACCGCGAGCTCGTTTGCTGCCAGCAGCAGCAGCAG CAGCAGCAGCAGCAGCAGCAGAAGCTGCAGCGCCTGCTGCTCGCTGCCCGGCAGCAGCAG CAGCAGCAGCAGCAGCAAACGAAACAAAAACAAAAAGTCATCAACAACTTAAGTTGGGGA GTTTGCAAATGTCTGCAGCAAATTGACAATCCGAAAGAACTGAAGAGAGATTTGCTGCTG CTGTACAGAAGCAGCGGCGCAGCAGCAGCAGCAGCAGCAGCAGCAAAGCCCCCCAACGAA GACGCTGCAGCAGAACAAACCAGGCAGCAGCAGCACCTCGAAGCAGCAATTAAACAACTC AAAAAAAGAATTTCAAAAGATGCAAAAACTCACAGAGAAGACAATTCAAAACTCATGAAA GAAAATGCAGATTTAATTAAAGAAATTAACAGCTTAAGAGCTGAAGTCCTTTCCCTCCAA GCAGCAAAAAGGGGCCTCAAAGCAGCAAACAGAAACGCCAGCAGCAGCAGCAGCAGCAGC AGCAGCAGCAGCGGCGGCGGCGGCGGCGGCCTCGGAGCTGCTGCTGCTGCGGCTGTAGCT GCTGCGGCGGCTGCCGAAGAGGCGAAAGCTGCAGCAGCAACGCAGCCTGCAGCAGCAGCA GCAGCAGCAGAAGCACCCCCTGCAACAGATGCAGCAGCAGCAGCAGCAGCAGCAGAAGCA GCAGCAGAAGGAAGTGTTGCTGCTGAATGTGCAAAGCTAATTGATGAGCAGCAAAAAGAA ATGGAAAAGATGAAAAGCAAATTTGGAGATAACTCAGAAGACAATTAA
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  • Fasta :-

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IDSitePeptideScoreMethod
ETH_00005615299 SSSSSSSSSS0.99unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India