ETH_00005680 | hypothetical protein, conserved

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  • Fasta :-

    >ETH_00005680 MCAVATAPNAIPVSLGWENKLLNTEDRANTRDQHVKRAKPPWKTRWESRPALTRRGEAPC EKKDSSVKPTEVTGEGYRPEEAEIEPQWWRKTSAKEAYNKKRALFYVCATAVLRVEVAGS PCGGALETGTSRSFISSKTVEWL
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00005680.fa Sequence name : ETH_00005680 Sequence length : 143 VALUES OF COMPUTED PARAMETERS Coef20 : 3.857 CoefTot : -0.092 ChDiff : 6 ZoneTo : 17 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.318 1.559 0.141 0.508 MesoH : -1.526 -0.393 -0.613 -0.024 MuHd_075 : 18.410 10.036 5.877 2.784 MuHd_095 : 5.240 7.105 1.429 1.894 MuHd_100 : 1.584 6.092 0.658 1.503 MuHd_105 : 6.392 6.946 0.992 2.178 Hmax_075 : 15.983 15.283 2.544 5.052 Hmax_095 : 12.500 12.900 1.947 5.080 Hmax_100 : 13.100 13.000 1.984 5.100 Hmax_105 : 13.000 12.400 1.499 4.990 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9937 0.0063 DFMC : 0.9871 0.0129
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 143 ETH_00005680 MCAVATAPNAIPVSLGWENKLLNTEDRANTRDQHVKRAKPPWKTRWESRPALTRRGEAPCEKKDSSVKPTEVTGEGYRPE 80 EAEIEPQWWRKTSAKEAYNKKRALFYVCATAVLRVEVAGSPCGGALETGTSRSFISSKTVEWL 160 ................................................................................ 80 ............................................................... 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00005680 20 SLGWENK|LL 0.068 . ETH_00005680 27 LLNTEDR|AN 0.111 . ETH_00005680 31 EDRANTR|DQ 0.105 . ETH_00005680 36 TRDQHVK|RA 0.077 . ETH_00005680 37 RDQHVKR|AK 0.220 . ETH_00005680 39 QHVKRAK|PP 0.069 . ETH_00005680 43 RAKPPWK|TR 0.070 . ETH_00005680 45 KPPWKTR|WE 0.099 . ETH_00005680 49 KTRWESR|PA 0.114 . ETH_00005680 54 SRPALTR|RG 0.075 . ETH_00005680 55 RPALTRR|GE 0.205 . ETH_00005680 62 GEAPCEK|KD 0.070 . ETH_00005680 63 EAPCEKK|DS 0.127 . ETH_00005680 68 KKDSSVK|PT 0.071 . ETH_00005680 78 VTGEGYR|PE 0.078 . ETH_00005680 90 IEPQWWR|KT 0.109 . ETH_00005680 91 EPQWWRK|TS 0.095 . ETH_00005680 95 WRKTSAK|EA 0.093 . ETH_00005680 100 AKEAYNK|KR 0.054 . ETH_00005680 101 KEAYNKK|RA 0.090 . ETH_00005680 102 EAYNKKR|AL 0.275 . ETH_00005680 114 CATAVLR|VE 0.067 . ETH_00005680 132 LETGTSR|SF 0.096 . ETH_00005680 138 RSFISSK|TV 0.091 . ____________________________^_________________

  • Fasta :-

    >ETH_00005680 ATGTGTGCAGTGGCGACTGCACCTAATGCCATTCCAGTCTCCCTCGGATGGGAAAACAAA CTACTCAACACGGAGGATAGAGCTAATACAAGAGATCAGCATGTGAAAAGGGCTAAGCCG CCGTGGAAAACGCGGTGGGAGTCACGACCTGCACTGACCCGGAGAGGAGAGGCTCCTTGC GAGAAGAAGGACAGCAGCGTAAAGCCTACGGAGGTAACTGGAGAAGGCTACAGGCCAGAA GAAGCAGAGATTGAGCCGCAGTGGTGGCGGAAGACTTCTGCGAAGGAGGCTTACAACAAA AAGAGAGCACTGTTTTATGTGTGTGCGACAGCGGTACTCCGAGTTGAGGTGGCAGGGAGT CCATGTGGAGGAGCTCTGGAGACAGGGACCTCGAGAAGTTTCATTAGTTCTAAAACAGTC GAATGGCTCTAG
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  • Fasta :-

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IDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_0000568066 SKKDSSVKPT0.998unspETH_0000568093 SWRKTSAKEA0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India