ETH_00005915 | 1-O-acylceramide synthase, putative

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0008374      

  • Computed_GO_Functions:  O-acyltransferase activity      

  • Computed_GO_Process_IDs:  GO:0006629      

  • Computed_GO_Processes:  lipid metabolic process      

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
ETH_00005915OTHER0.5794390.4189760.001585
No Results

  • Fasta :-

    >ETH_00005915 MKSLGSGVSVRAVWVVQWYRLLGLLFCSYAFLGVLVQHGVSCTSPVGGRECDGHDCNTTT GSSRPVPTEGVQVVDDSPRQANAAQEVAGANSPEHPIFMVPGIAGSGLMVSTKNASLPLC AASPVSSTVPFRLWASLSLVRPPRSHQLCWMDMMQPISDEKGEHYSSKDGVVVEVDSYGT AHGFDYLDYYYNERFGVPGTAYFHTMLRTFYSMGYVEGSSLIGIPYDWRLPPWQMDFDRL KSQIEHHVEAMGGAKADLLVHSLGSIVCNYFLNKVVDKRWKDKYINSYTLVAPATGGSFK AIKAILTGYNDPVDLTFWTLLDISLIPVDVLRDLARSLGSIYALLPDIDLYGKDHLVLRQ LLPKSGTVSPAFSALAEGQDGGVPSAMVNSGRSLEFRRLAESDAGVGIQELTDKSEENGD AEHRMNPQEQQVGEQLVQDAIDAQVKQRTLQLHQYVENARERMAAVKRLEATEDLNEVVY TLGNWTTLLEPELRARAETARERMKGVLEDPGVPTRCIWSVFGFPSTDVGYIYTGTDLSR KPIPVLDVGDDTVPLRSLSVCTGWSSTFEVKTFKNLDHMFIFGDGEFNSYIQVAFGKPKE KSEVQEASERST
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00005915.fa Sequence name : ETH_00005915 Sequence length : 612 VALUES OF COMPUTED PARAMETERS Coef20 : 4.534 CoefTot : -0.766 ChDiff : -19 ZoneTo : 49 KR : 4 DE : 0 CleavSite : 30 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.841 2.041 0.359 0.724 MesoH : 0.139 0.594 -0.209 0.299 MuHd_075 : 25.799 21.600 5.460 6.178 MuHd_095 : 23.476 17.909 6.663 5.828 MuHd_100 : 18.628 16.100 5.641 4.771 MuHd_105 : 19.952 15.817 4.953 5.926 Hmax_075 : 11.700 23.567 3.831 5.000 Hmax_095 : 14.000 19.700 4.010 5.310 Hmax_100 : 15.000 17.400 4.571 6.380 Hmax_105 : 17.400 21.233 1.245 6.230 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.4648 0.5352 DFMC : 0.4457 0.5543 This protein is probably imported in mitochondria. f(Ser) = 0.1224 f(Arg) = 0.0612 CMi = 0.78637 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 612 ETH_00005915 MKSLGSGVSVRAVWVVQWYRLLGLLFCSYAFLGVLVQHGVSCTSPVGGRECDGHDCNTTTGSSRPVPTEGVQVVDDSPRQ 80 ANAAQEVAGANSPEHPIFMVPGIAGSGLMVSTKNASLPLCAASPVSSTVPFRLWASLSLVRPPRSHQLCWMDMMQPISDE 160 KGEHYSSKDGVVVEVDSYGTAHGFDYLDYYYNERFGVPGTAYFHTMLRTFYSMGYVEGSSLIGIPYDWRLPPWQMDFDRL 240 KSQIEHHVEAMGGAKADLLVHSLGSIVCNYFLNKVVDKRWKDKYINSYTLVAPATGGSFKAIKAILTGYNDPVDLTFWTL 320 LDISLIPVDVLRDLARSLGSIYALLPDIDLYGKDHLVLRQLLPKSGTVSPAFSALAEGQDGGVPSAMVNSGRSLEFRRLA 400 ESDAGVGIQELTDKSEENGDAEHRMNPQEQQVGEQLVQDAIDAQVKQRTLQLHQYVENARERMAAVKRLEATEDLNEVVY 480 TLGNWTTLLEPELRARAETARERMKGVLEDPGVPTRCIWSVFGFPSTDVGYIYTGTDLSRKPIPVLDVGDDTVPLRSLSV 560 CTGWSSTFEVKTFKNLDHMFIFGDGEFNSYIQVAFGKPKEKSEVQEASERST 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 .................................................... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00005915 2 -----MK|SL 0.112 . ETH_00005915 11 GSGVSVR|AV 0.208 . ETH_00005915 20 WVVQWYR|LL 0.084 . ETH_00005915 49 TSPVGGR|EC 0.089 . ETH_00005915 64 TTTGSSR|PV 0.130 . ETH_00005915 79 VVDDSPR|QA 0.113 . ETH_00005915 113 GLMVSTK|NA 0.076 . ETH_00005915 132 SSTVPFR|LW 0.076 . ETH_00005915 141 ASLSLVR|PP 0.069 . ETH_00005915 144 SLVRPPR|SH 0.328 . ETH_00005915 161 QPISDEK|GE 0.060 . ETH_00005915 168 GEHYSSK|DG 0.096 . ETH_00005915 194 DYYYNER|FG 0.078 . ETH_00005915 208 YFHTMLR|TF 0.076 . ETH_00005915 229 GIPYDWR|LP 0.067 . ETH_00005915 239 WQMDFDR|LK 0.168 . ETH_00005915 241 MDFDRLK|SQ 0.074 . ETH_00005915 255 EAMGGAK|AD 0.057 . ETH_00005915 274 CNYFLNK|VV 0.072 . ETH_00005915 278 LNKVVDK|RW 0.068 . ETH_00005915 279 NKVVDKR|WK 0.250 . ETH_00005915 281 VVDKRWK|DK 0.067 . ETH_00005915 283 DKRWKDK|YI 0.084 . ETH_00005915 300 ATGGSFK|AI 0.087 . ETH_00005915 303 GSFKAIK|AI 0.080 . ETH_00005915 332 IPVDVLR|DL 0.133 . ETH_00005915 336 VLRDLAR|SL 0.190 . ETH_00005915 353 DIDLYGK|DH 0.054 . ETH_00005915 359 KDHLVLR|QL 0.096 . ETH_00005915 364 LRQLLPK|SG 0.083 . ETH_00005915 392 AMVNSGR|SL 0.146 . ETH_00005915 397 GRSLEFR|RL 0.130 . ETH_00005915 398 RSLEFRR|LA 0.134 . ETH_00005915 414 IQELTDK|SE 0.080 . ETH_00005915 424 NGDAEHR|MN 0.088 . ETH_00005915 446 AIDAQVK|QR 0.064 . ETH_00005915 448 DAQVKQR|TL 0.096 . ETH_00005915 460 QYVENAR|ER 0.082 . ETH_00005915 462 VENARER|MA 0.108 . ETH_00005915 467 ERMAAVK|RL 0.077 . ETH_00005915 468 RMAAVKR|LE 0.150 . ETH_00005915 494 LLEPELR|AR 0.069 . ETH_00005915 496 EPELRAR|AE 0.104 . ETH_00005915 501 ARAETAR|ER 0.127 . ETH_00005915 503 AETARER|MK 0.094 . ETH_00005915 505 TARERMK|GV 0.085 . ETH_00005915 516 DPGVPTR|CI 0.108 . ETH_00005915 540 TGTDLSR|KP 0.090 . ETH_00005915 541 GTDLSRK|PI 0.071 . ETH_00005915 556 DDTVPLR|SL 0.131 . ETH_00005915 571 SSTFEVK|TF 0.064 . ETH_00005915 574 FEVKTFK|NL 0.066 . ETH_00005915 597 IQVAFGK|PK 0.090 . ETH_00005915 599 VAFGKPK|EK 0.080 . ETH_00005915 601 FGKPKEK|SE 0.074 . ETH_00005915 610 VQEASER|ST 0.116 . ____________________________^_________________

  • Fasta :-

    >ETH_00005915 ATGAAGTCCTTGGGGAGCGGAGTGTCTGTGCGTGCCGTTTGGGTGGTCCAGTGGTACAGG CTGCTCGGCCTTTTGTTTTGTTCCTATGCGTTTCTCGGTGTATTGGTGCAACACGGAGTC TCGTGTACTTCGCCAGTGGGAGGGAGAGAATGTGATGGACATGACTGCAACACAACCACA GGGTCATCACGGCCCGTTCCCACAGAAGGAGTTCAAGTTGTTGACGACTCCCCCAGACAG GCAAATGCAGCACAGGAGGTCGCAGGTGCAAATTCCCCAGAGCATCCAATTTTCATGGTT CCTGGAATCGCAGGAAGTGGCCTTATGGTCAGCACGAAGAATGCGTCACTGCCTCTATGT GCTGCTTCACCTGTTAGCTCTACAGTACCATTTAGACTGTGGGCCTCTCTCTCCCTCGTT AGACCTCCTCGTTCACACCAGCTCTGCTGGATGGACATGATGCAGCCCATCTCTGACGAG AAAGGGGAACACTACTCCAGTAAGGATGGGGTAGTAGTTGAAGTTGACAGTTACGGAACT GCCCACGGCTTTGATTACTTGGACTATTACTACAACGAGAGATTTGGAGTACCAGGGACA GCGTATTTTCACACCATGCTGCGGACGTTCTACTCCATGGGTTATGTGGAAGGGAGCTCC CTCATAGGCATACCGTATGACTGGCGCCTCCCACCTTGGCAGATGGATTTTGACCGACTC AAGTCTCAGATCGAGCATCATGTCGAAGCAATGGGGGGCGCCAAGGCAGATCTGCTGGTT CATAGTCTGGGGTCCATCGTTTGTAATTATTTTCTGAACAAAGTGGTGGACAAACGATGG AAGGACAAGTACATCAACTCCTACACGCTTGTCGCCCCAGCAACTGGGGGGAGCTTCAAG GCCATTAAGGCCATTTTAACTGGCTACAACGATCCGGTGGACTTGACGTTTTGGACTTTA CTTGATATCAGCCTGATTCCAGTGGATGTCTTACGTGATCTCGCCCGAAGCCTTGGCTCC ATCTATGCATTACTTCCGGACATCGATCTTTATGGAAAGGATCATTTGGTATTGCGACAG TTGCTCCCTAAATCAGGCACTGTGTCACCTGCTTTTTCCGCCCTAGCTGAAGGCCAAGAT GGAGGGGTTCCTTCAGCTATGGTGAATAGTGGCCGATCTCTTGAGTTTAGGAGGCTTGCT GAGTCAGATGCAGGGGTCGGCATACAGGAGCTGACAGACAAGAGCGAAGAAAATGGAGAT GCGGAACACAGAATGAATCCACAGGAGCAGCAGGTTGGGGAGCAATTGGTCCAAGATGCG ATCGACGCACAGGTAAAGCAACGGACGCTGCAACTGCATCAGTACGTCGAAAATGCCAGG GAAAGGATGGCGGCAGTGAAGCGCCTTGAAGCTACAGAGGATTTGAACGAGGTTGTATAT ACTCTAGGCAACTGGACGACTTTACTGGAACCCGAGCTGCGAGCTCGCGCAGAGACAGCA CGAGAGCGCATGAAAGGGGTGCTGGAAGACCCTGGAGTCCCCACAAGATGCATTTGGAGT GTTTTTGGCTTCCCTTCTACTGACGTCGGCTACATCTACACTGGCACGGATCTTTCTCGG AAGCCGATACCTGTGCTCGACGTGGGGGACGATACAGTCCCACTACGTTCTCTTTCAGTT TGCACAGGATGGTCCTCTACTTTTGAGGTAAAGACGTTCAAGAATTTGGACCATATGTTC ATATTTGGGGATGGCGAGTTTAACAGCTATATTCAAGTTGCTTTTGGCAAACCGAAGGAG AAAAGTGAAGTGCAGGAAGCATCGGAACGAAGCACGTGA
  • Download Fasta

  • Fasta :-

    MKSLGSGVSVRAVWVVQWYRLLGLLFCSYAFLGVLVQHGVSCTSPVGGRECDGHDCNTTT GSSRPVPTEGVQVVDDSPRQANAAQEVAGANSPEHPIFMVPGIAGSGLMVSTKNASLPLC AASPVSSTVPFRLWASLSLVRPPRSHQLCWMDMMQPISDEKGEHYSSKDGVVVEVDSYGT AHGFDYLDYYYNERFGVPGTAYFHTMLRTFYSMGYVEGSSLIGIPYDWRLPPWQMDFDRL KSQIEHHVEAMGGAKADLLVHSLGSIVCNYFLNKVVDKRWKDKYINSYTLVAPATGGSFK AIKAILTGYNDPVDLTFWTLLDISLIPVDVLRDLARSLGSIYALLPDIDLYGKDHLVLRQ LLPKSGTVSPAFSALAEGQDGGVPSAMVNSGRSLEFRRLAESDAGVGIQELTDKSEENGD AEHRMNPQEQQVGEQLVQDAIDAQVKQRTLQLHQYVENARERMAAVKRLEATEDLNEVVY TLGNWTTLLEPELRARAETARERMKGVLEDPGVPTRCIWSVFGFPSTDVGYIYTGTDLSR KPIPVLDVGDDTVPLRSLSVCTGWSSTFEVKTFKNLDHMFIFGDGEFNSYIQVAFGKPKE KSEVQEASERST

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_00005915284 YWKDKYINSY0.99unspETH_00005915284 YWKDKYINSY0.99unspETH_00005915284 YWKDKYINSY0.99unspETH_00005915415 SLTDKSEENG0.995unspETH_00005915166 SGEHYSSKDG0.996unspETH_00005915242 SDRLKSQIEH0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India