ETH_00006785 | proteasome A-type and B-type domain-containing protein, putative

_IDPredictionOTHERSPmTPCS_Position
ETH_00006785OTHER0.9997720.0002070.000021
No Results

  • Fasta :-

    >ETH_00006785 MYAIDCMSAAGALQGGTPGAAAGAATAGAATPPADTRNPITTTSSVLALKYRDGVLMVAD TAVSYGRMMRFRGQPRFMNLDNKTLICTSGEYSDHQFLERELQELVDEDAAHADCSSSSS SSSSSTTLSPKAIASYTSRTMYQRRCKFNPYWLSVIVAGHMGSPKGIHEQQQQQQQQQQQ QEGQQQQGSEMYLGAIDMLGTFFEEQVVATGLGRYFAITLMRERQRPDMSEEEARELLEE CMRILFYRDCAASNEVQFAKVTASGVTVDEPKKLDSKWHFEAYTKKTIDMDMAGCSCTRL KKTKSSEEVYLLQAPAAAGAATAAAAAAAVAATAGAQAAARAMPPNGSCLG
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00006785.fa Sequence name : ETH_00006785 Sequence length : 351 VALUES OF COMPUTED PARAMETERS Coef20 : 3.424 CoefTot : -0.758 ChDiff : -5 ZoneTo : 52 KR : 3 DE : 2 CleavSite : 54 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.600 1.665 0.267 0.601 MesoH : -0.226 0.225 -0.230 0.175 MuHd_075 : 18.023 12.330 4.785 4.144 MuHd_095 : 12.092 12.158 4.424 3.662 MuHd_100 : 15.444 10.016 3.692 4.152 MuHd_105 : 14.163 13.560 4.578 3.720 Hmax_075 : 12.800 2.450 3.087 3.255 Hmax_095 : 10.300 12.163 1.190 2.818 Hmax_100 : 1.900 12.800 -1.298 2.120 Hmax_105 : 2.450 11.300 3.955 0.960 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9905 0.0095 DFMC : 0.9799 0.0201
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 351 ETH_00006785 MYAIDCMSAAGALQGGTPGAAAGAATAGAATPPADTRNPITTTSSVLALKYRDGVLMVADTAVSYGRMMRFRGQPRFMNL 80 DNKTLICTSGEYSDHQFLERELQELVDEDAAHADCSSSSSSSSSSTTLSPKAIASYTSRTMYQRRCKFNPYWLSVIVAGH 160 MGSPKGIHEQQQQQQQQQQQQEGQQQQGSEMYLGAIDMLGTFFEEQVVATGLGRYFAITLMRERQRPDMSEEEARELLEE 240 CMRILFYRDCAASNEVQFAKVTASGVTVDEPKKLDSKWHFEAYTKKTIDMDMAGCSCTRLKKTKSSEEVYLLQAPAAAGA 320 ATAAAAAAAVAATAGAQAAARAMPPNGSCLG 400 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ............................... 400 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00006785 37 TPPADTR|NP 0.086 . ETH_00006785 50 SSVLALK|YR 0.073 . ETH_00006785 52 VLALKYR|DG 0.093 . ETH_00006785 67 TAVSYGR|MM 0.079 . ETH_00006785 70 SYGRMMR|FR 0.378 . ETH_00006785 72 GRMMRFR|GQ 0.108 . ETH_00006785 76 RFRGQPR|FM 0.092 . ETH_00006785 83 FMNLDNK|TL 0.057 . ETH_00006785 100 DHQFLER|EL 0.082 . ETH_00006785 131 STTLSPK|AI 0.064 . ETH_00006785 139 IASYTSR|TM 0.102 . ETH_00006785 144 SRTMYQR|RC 0.078 . ETH_00006785 145 RTMYQRR|CK 0.132 . ETH_00006785 147 MYQRRCK|FN 0.136 . ETH_00006785 165 GHMGSPK|GI 0.107 . ETH_00006785 214 VATGLGR|YF 0.083 . ETH_00006785 222 FAITLMR|ER 0.072 . ETH_00006785 224 ITLMRER|QR 0.067 . ETH_00006785 226 LMRERQR|PD 0.097 . ETH_00006785 235 MSEEEAR|EL 0.095 . ETH_00006785 243 LLEECMR|IL 0.078 . ETH_00006785 248 MRILFYR|DC 0.163 . ETH_00006785 260 NEVQFAK|VT 0.069 . ETH_00006785 272 VTVDEPK|KL 0.067 . ETH_00006785 273 TVDEPKK|LD 0.085 . ETH_00006785 277 PKKLDSK|WH 0.059 . ETH_00006785 285 HFEAYTK|KT 0.063 . ETH_00006785 286 FEAYTKK|TI 0.113 . ETH_00006785 299 AGCSCTR|LK 0.070 . ETH_00006785 301 CSCTRLK|KT 0.067 . ETH_00006785 302 SCTRLKK|TK 0.279 . ETH_00006785 304 TRLKKTK|SS 0.122 . ETH_00006785 341 GAQAAAR|AM 0.104 . ____________________________^_________________

  • Fasta :-

    >ETH_00006785 ATGTACGCGATAGACTGCATGTCGGCGGCCGGGGCGCTGCAGGGCGGCACGCCCGGAGCA GCAGCAGGAGCAGCAACAGCAGGTGCTGCTACGCCTCCCGCAGACACCAGAAATCCCATA ACCACCACTTCATCTGTTCTGGCCCTCAAGTACAGAGACGGAGTCCTCATGGTGGCCGAC ACAGCAGTGTCCTACGGACGCATGATGCGATTTCGCGGACAACCCCGATTCATGAACCTC GACAACAAAACCCTCATTTGCACTTCTGGGGAATACTCAGACCACCAGTTTTTGGAGCGG GAGCTGCAAGAGTTGGTGGACGAGGACGCGGCCCACGCGGACTGCAGCAGCAGCAGTAGC AGCAGCAGCAGCAGCACCACCCTCAGCCCCAAGGCCATTGCCAGCTACACCTCCAGGACA ATGTATCAAAGAAGGTGCAAATTCAATCCTTACTGGCTATCCGTTATCGTCGCGGGACAC ATGGGCAGCCCCAAGGGCATTCACGAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAG CAGGAAGGACAGCAGCAGCAGGGCTCCGAAATGTACTTGGGAGCCATAGATATGCTTGGC ACATTCTTCGAAGAGCAAGTTGTCGCCACGGGTCTTGGGCGTTACTTTGCAATTACTCTG ATGAGAGAGAGGCAGCGCCCCGACATGTCTGAAGAGGAGGCGCGGGAGCTGCTTGAGGAG TGCATGCGGATTTTGTTCTACAGAGACTGCGCAGCCTCTAACGAGGTGCAGTTCGCTAAA GTTACGGCCTCGGGAGTGACAGTCGACGAACCCAAAAAGCTTGACTCCAAATGGCATTTC GAGGCCTACACGAAGAAGACTATAGATATGGACATGGCTGGGTGCTCCTGCACCAGACTT AAAAAAACAAAGTCCTCTGAAGAGGTCTACTTGCTGCAAGCACCTGCAGCAGCGGGTGCT GCAACTGCCGCTGCAGCAGCAGCTGCTGTAGCAGCAACTGCAGGGGCACAAGCCGCTGCA AGGGCAATGCCGCCGAATGGCTCTTGCTTAGGCTAG
  • Download Fasta

  • Fasta :-

    MYAIDCMSAAGALQGGTPGAAAGAATAGAATPPADTRNPITTTSSVLALKYRDGVLMVAD TAVSYGRMMRFRGQPRFMNLDNKTLICTSGEYSDHQFLERELQELVDEDAAHADCSSSSS SSSSSTTLSPKAIASYTSRTMYQRRCKFNPYWLSVIVAGHMGSPKGIHEQQQQQQQQQQQ QEGQQQQGSEMYLGAIDMLGTFFEEQVVATGLGRYFAITLMRERQRPDMSEEEARELLEE CMRILFYRDCAASNEVQFAKVTASGVTVDEPKKLDSKWHFEAYTKKTIDMDMAGCSCTRL KKTKSSEEVYLLQAPAAAGAATAAAAAAAVAATAGAQAAARAMPPNGSCLG

  • title: active site
  • coordinates: S44,D60,A62,R76
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_00006785230 SRPDMSEEEA0.997unspETH_00006785230 SRPDMSEEEA0.997unspETH_00006785230 SRPDMSEEEA0.997unspETH_00006785305 SKKTKSSEEV0.991unspETH_00006785122 SSSSSSSSST0.993unspETH_00006785129 SSTTLSPKAI0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India