ETH_00007310 | ubiquitin carboxyl-terminal hydrolase, putative

_IDPredictionOTHERSPmTPCS_Position
ETH_00007310OTHER0.9996160.0001410.000243
No Results

  • Fasta :-

    >ETH_00007310 MKASEVQAAVKWGAKSFNVQIDPNEPLEVFQAQLYTLTGVPVERQKLLCKGKTIKVDADL QALVSSGCPKIMLMGTAEEKTAVKPPPEKTVFVEDLTPAQQAALLKEKKVEPLPNGIVNL GNTCYLASVLQMLRPAKDFSDLLKNYISGGAATAQFAATGQQGALRRLSLALKDFYNQWD QTVEAVSPFLLVPTLREAYPQFSRRSTSQAGTTGVPMQQDAEECLSCLMTAVAESLDSGA AAGLSKSLPYLPLKAGSSPLDLLFEVQVEVTSSRTKKEGEAEPKPTVQVERHRKLTCFLG TPQKPVSTIEDSLKFSLGDEVVNVGSTSAGASGTEEDTLIRSNRISSLALYLIVHFMRFE WKMGGSESEKAKICRSVKFSQTLDMFTYCTKELQDSFKVGRAIVALRREREASSGGAEKT TNGTASTESGAPAADGAAAATAAPEAAAVPAATNGSGAAHSAAAPAAEAAEAEAKKKETE LLRLAGKPCPTGTYQLLSVVTHQGRYADSGHYVGWARAGDAGTLQGPPTAQSEDKEEEEP AAPSGPAAKRRKNVDMWRKFDDDKVSEVPWDSIDLAGGRSDYHVAYLLLMKHILVVPTEE ELLAVAKQL
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00007310.fa Sequence name : ETH_00007310 Sequence length : 609 VALUES OF COMPUTED PARAMETERS Coef20 : 3.961 CoefTot : -0.478 ChDiff : -7 ZoneTo : 21 KR : 3 DE : 1 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.929 1.224 0.124 0.509 MesoH : -0.362 0.213 -0.298 0.185 MuHd_075 : 22.339 10.790 6.251 4.119 MuHd_095 : 22.002 18.140 7.567 6.250 MuHd_100 : 23.745 16.686 7.852 5.630 MuHd_105 : 30.583 19.795 10.216 6.197 Hmax_075 : 6.650 8.167 -0.138 2.770 Hmax_095 : 9.975 13.600 1.353 5.120 Hmax_100 : 10.500 10.900 1.453 5.050 Hmax_105 : 14.117 13.767 2.540 5.040 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8578 0.1422 DFMC : 0.9014 0.0986
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 609 ETH_00007310 MKASEVQAAVKWGAKSFNVQIDPNEPLEVFQAQLYTLTGVPVERQKLLCKGKTIKVDADLQALVSSGCPKIMLMGTAEEK 80 TAVKPPPEKTVFVEDLTPAQQAALLKEKKVEPLPNGIVNLGNTCYLASVLQMLRPAKDFSDLLKNYISGGAATAQFAATG 160 QQGALRRLSLALKDFYNQWDQTVEAVSPFLLVPTLREAYPQFSRRSTSQAGTTGVPMQQDAEECLSCLMTAVAESLDSGA 240 AAGLSKSLPYLPLKAGSSPLDLLFEVQVEVTSSRTKKEGEAEPKPTVQVERHRKLTCFLGTPQKPVSTIEDSLKFSLGDE 320 VVNVGSTSAGASGTEEDTLIRSNRISSLALYLIVHFMRFEWKMGGSESEKAKICRSVKFSQTLDMFTYCTKELQDSFKVG 400 RAIVALRREREASSGGAEKTTNGTASTESGAPAADGAAAATAAPEAAAVPAATNGSGAAHSAAAPAAEAAEAEAKKKETE 480 LLRLAGKPCPTGTYQLLSVVTHQGRYADSGHYVGWARAGDAGTLQGPPTAQSEDKEEEEPAAPSGPAAKRRKNVDMWRKF 560 DDDKVSEVPWDSIDLAGGRSDYHVAYLLLMKHILVVPTEEELLAVAKQL 640 ................................................................................ 80 ................................................................................ 160 ............................................P................................... 240 ....................................P........................................... 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................. 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 2 Name Pos Context Score Pred ____________________________v_________________ ETH_00007310 2 -----MK|AS 0.073 . ETH_00007310 11 EVQAAVK|WG 0.062 . ETH_00007310 15 AVKWGAK|SF 0.079 . ETH_00007310 44 TGVPVER|QK 0.075 . ETH_00007310 46 VPVERQK|LL 0.068 . ETH_00007310 50 RQKLLCK|GK 0.066 . ETH_00007310 52 KLLCKGK|TI 0.064 . ETH_00007310 55 CKGKTIK|VD 0.062 . ETH_00007310 70 VSSGCPK|IM 0.069 . ETH_00007310 80 MGTAEEK|TA 0.059 . ETH_00007310 84 EEKTAVK|PP 0.056 . ETH_00007310 89 VKPPPEK|TV 0.070 . ETH_00007310 106 QQAALLK|EK 0.058 . ETH_00007310 108 AALLKEK|KV 0.081 . ETH_00007310 109 ALLKEKK|VE 0.064 . ETH_00007310 134 SVLQMLR|PA 0.071 . ETH_00007310 137 QMLRPAK|DF 0.207 . ETH_00007310 144 DFSDLLK|NY 0.072 . ETH_00007310 166 GQQGALR|RL 0.108 . ETH_00007310 167 QQGALRR|LS 0.103 . ETH_00007310 173 RLSLALK|DF 0.080 . ETH_00007310 196 LLVPTLR|EA 0.111 . ETH_00007310 204 AYPQFSR|RS 0.072 . ETH_00007310 205 YPQFSRR|ST 0.606 *ProP* ETH_00007310 246 AAAGLSK|SL 0.069 . ETH_00007310 254 LPYLPLK|AG 0.065 . ETH_00007310 274 VEVTSSR|TK 0.093 . ETH_00007310 276 VTSSRTK|KE 0.076 . ETH_00007310 277 TSSRTKK|EG 0.558 *ProP* ETH_00007310 284 EGEAEPK|PT 0.076 . ETH_00007310 291 PTVQVER|HR 0.071 . ETH_00007310 293 VQVERHR|KL 0.094 . ETH_00007310 294 QVERHRK|LT 0.187 . ETH_00007310 304 FLGTPQK|PV 0.107 . ETH_00007310 314 TIEDSLK|FS 0.067 . ETH_00007310 341 EEDTLIR|SN 0.089 . ETH_00007310 344 TLIRSNR|IS 0.357 . ETH_00007310 358 LIVHFMR|FE 0.122 . ETH_00007310 362 FMRFEWK|MG 0.070 . ETH_00007310 370 GGSESEK|AK 0.062 . ETH_00007310 372 SESEKAK|IC 0.090 . ETH_00007310 375 EKAKICR|SV 0.326 . ETH_00007310 378 KICRSVK|FS 0.145 . ETH_00007310 391 MFTYCTK|EL 0.063 . ETH_00007310 398 ELQDSFK|VG 0.068 . ETH_00007310 401 DSFKVGR|AI 0.106 . ETH_00007310 407 RAIVALR|RE 0.074 . ETH_00007310 408 AIVALRR|ER 0.106 . ETH_00007310 410 VALRRER|EA 0.286 . ETH_00007310 419 SSGGAEK|TT 0.067 . ETH_00007310 475 AAEAEAK|KK 0.072 . ETH_00007310 476 AEAEAKK|KE 0.089 . ETH_00007310 477 EAEAKKK|ET 0.107 . ETH_00007310 483 KETELLR|LA 0.100 . ETH_00007310 487 LLRLAGK|PC 0.071 . ETH_00007310 505 VVTHQGR|YA 0.119 . ETH_00007310 517 HYVGWAR|AG 0.111 . ETH_00007310 535 TAQSEDK|EE 0.064 . ETH_00007310 549 PSGPAAK|RR 0.063 . ETH_00007310 550 SGPAAKR|RK 0.120 . ETH_00007310 551 GPAAKRR|KN 0.229 . ETH_00007310 552 PAAKRRK|NV 0.162 . ETH_00007310 558 KNVDMWR|KF 0.095 . ETH_00007310 559 NVDMWRK|FD 0.094 . ETH_00007310 564 RKFDDDK|VS 0.062 . ETH_00007310 579 IDLAGGR|SD 0.092 . ETH_00007310 591 AYLLLMK|HI 0.062 . ETH_00007310 607 ELLAVAK|QL 0.070 . ____________________________^_________________

  • Fasta :-

    >ETH_00007310 ATGAAGGCCTCAGAGGTGCAGGCAGCAGTTAAGTGGGGTGCTAAGTCCTTCAACGTTCAA ATAGACCCAAATGAGCCCCTGGAAGTCTTCCAAGCTCAACTCTACACTCTTACGGGGGTT CCCGTAGAACGCCAGAAGCTCTTGTGCAAAGGCAAGACCATAAAGGTTGATGCGGATCTC CAGGCTTTAGTGTCTTCTGGCTGTCCCAAGATAATGCTAATGGGCACAGCCGAAGAGAAG ACGGCAGTGAAACCGCCGCCAGAAAAAACTGTTTTTGTTGAAGACCTTACGCCGGCGCAG CAGGCGGCGCTGCTGAAGGAAAAGAAAGTAGAGCCCTTGCCGAACGGCATAGTTAATCTG GGGAACACCTGTTACCTGGCTTCAGTTTTGCAGATGCTGCGTCCCGCAAAAGACTTTTCT GATCTGCTGAAAAATTACATTTCGGGAGGAGCAGCAACTGCCCAGTTTGCAGCGACAGGC CAGCAGGGAGCTCTTCGTCGGCTTTCGTTGGCTCTTAAGGATTTCTACAACCAGTGGGAC CAAACAGTCGAGGCTGTTTCCCCCTTTCTTCTGGTGCCAACACTGCGAGAGGCCTACCCA CAGTTTTCTCGACGCTCAACTTCGCAAGCAGGCACAACTGGAGTTCCCATGCAACAAGAC GCTGAGGAATGCCTCAGCTGTTTGATGACAGCGGTGGCGGAGAGTCTGGACTCAGGAGCG GCCGCAGGCTTGTCAAAGTCTTTACCATACTTGCCCCTGAAAGCTGGCTCGTCACCCCTT GACTTGCTTTTCGAAGTGCAAGTTGAGGTCACTTCAAGTCGAACCAAGAAGGAAGGCGAG GCGGAGCCGAAACCCACAGTGCAAGTCGAACGGCACCGCAAGCTCACTTGCTTCTTGGGC ACCCCACAGAAGCCAGTGAGCACCATCGAGGACAGCTTGAAGTTCTCACTTGGCGACGAA GTCGTGAATGTGGGCAGCACCAGTGCGGGCGCATCAGGAACAGAGGAAGACACCCTCATC CGCAGCAACAGAATCAGCAGCCTTGCTCTGTACCTAATTGTGCACTTCATGCGCTTCGAG TGGAAAATGGGCGGCAGCGAATCGGAGAAGGCCAAAATCTGCCGAAGCGTCAAATTCTCC CAGACACTCGACATGTTTACTTACTGCACCAAGGAATTGCAAGATTCCTTCAAAGTAGGC CGGGCGATTGTGGCTCTACGGCGAGAACGCGAGGCGTCTTCAGGAGGCGCAGAAAAGACC ACTAATGGGACCGCGTCTACTGAGTCCGGTGCGCCTGCGGCTGATGGCGCAGCTGCTGCA ACTGCAGCACCTGAGGCTGCAGCTGTACCTGCTGCGACGAATGGCAGCGGAGCTGCACAC TCGGCAGCAGCACCTGCTGCAGAGGCCGCCGAAGCAGAGGCAAAAAAGAAAGAAACCGAA CTTCTTCGCCTTGCAGGAAAGCCTTGTCCAACGGGCACATACCAGTTGCTCAGCGTTGTC ACCCACCAAGGCCGGTACGCAGACAGTGGACACTACGTAGGGTGGGCGAGAGCAGGCGAT GCAGGCACTTTGCAGGGCCCGCCCACCGCACAATCTGAAGACAAGGAGGAGGAAGAACCC GCAGCGCCATCAGGCCCTGCAGCGAAACGCAGGAAAAATGTTGACATGTGGCGGAAGTTT GACGACGATAAGGTCTCAGAGGTTCCGTGGGATTCAATTGACCTGGCGGGTGGACGCAGC GACTACCACGTTGCGTATTTGTTGCTGATGAAACATATATTAGTTGTCCCCACCGAAGAG GAGCTGCTAGCTGTGGCAAAACAATTATGA
  • Download Fasta

  • Fasta :-

    MKASEVQAAVKWGAKSFNVQIDPNEPLEVFQAQLYTLTGVPVERQKLLCKGKTIKVDADL QALVSSGCPKIMLMGTAEEKTAVKPPPEKTVFVEDLTPAQQAALLKEKKVEPLPNGIVNL GNTCYLASVLQMLRPAKDFSDLLKNYISGGAATAQFAATGQQGALRRLSLALKDFYNQWD QTVEAVSPFLLVPTLREAYPQFSRRSTSQAGTTGVPMQQDAEECLSCLMTAVAESLDSGA AAGLSKSLPYLPLKAGSSPLDLLFEVQVEVTSSRTKKEGEAEPKPTVQVERHRKLTCFLG TPQKPVSTIEDSLKFSLGDEVVNVGSTSAGASGTEEDTLIRSNRISSLALYLIVHFMRFE WKMGGSESEKAKICRSVKFSQTLDMFTYCTKELQDSFKVGRAIVALRREREASSGGAEKT TNGTASTESGAPAADGAAAATAAPEAAAVPAATNGSGAAHSAAAPAAEAAEAEAKKKETE LLRLAGKPCPTGTYQLLSVVTHQGRYADSGHYVGWARAGDAGTLQGPPTAQSEDKEEEEP AAPSGPAAKRRKNVDMWRKFDDDKVSEVPWDSIDLAGGRSDYHVAYLLLMKHILVVPTEE ELLAVAKQL

  • title: Active Site
  • coordinates: N119,C124,H511,D562
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_00007310316 SSLKFSLGDE0.994unspETH_00007310316 SSLKFSLGDE0.994unspETH_00007310316 SSLKFSLGDE0.994unspETH_00007310332 SSAGASGTEE0.996unspETH_00007310396 SELQDSFKVG0.991unspETH_00007310413 SEREASSGGA0.995unspETH_00007310426 SNGTASTESG0.994unspETH_00007310208 SRRSTSQAGT0.994unspETH_00007310307 SQKPVSTIED0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India