ETH_00007970 | hypothetical protein

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  • Fasta :-

    >ETH_00007970 MMCPIATGPNAIPVSLERGNHLLNTVEENKMSDEAVQGTQPPSEAWLESGPKPVRSEEAP CGKTVTSGKSAEATEEDCLTEAIETMPH
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00007970.fa Sequence name : ETH_00007970 Sequence length : 88 VALUES OF COMPUTED PARAMETERS Coef20 : 3.583 CoefTot : -0.627 ChDiff : -9 ZoneTo : 16 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.753 0.776 0.004 0.406 MesoH : -1.503 -0.605 -0.654 -0.027 MuHd_075 : 21.057 14.476 3.327 4.196 MuHd_095 : 21.877 10.602 5.379 5.749 MuHd_100 : 24.071 13.937 4.875 6.023 MuHd_105 : 20.080 13.671 4.952 4.580 Hmax_075 : 7.787 10.300 1.278 3.701 Hmax_095 : 13.800 11.900 2.551 5.260 Hmax_100 : 16.600 14.600 2.546 5.780 Hmax_105 : 16.100 17.383 2.937 6.160 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9423 0.0577 DFMC : 0.9367 0.0633
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 88 ETH_00007970 MMCPIATGPNAIPVSLERGNHLLNTVEENKMSDEAVQGTQPPSEAWLESGPKPVRSEEAPCGKTVTSGKSAEATEEDCLT 80 EAIETMPH 160 ................................................................................ 80 ........ 160 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00007970 18 IPVSLER|GN 0.084 . ETH_00007970 30 NTVEENK|MS 0.064 . ETH_00007970 52 WLESGPK|PV 0.072 . ETH_00007970 55 SGPKPVR|SE 0.099 . ETH_00007970 63 EEAPCGK|TV 0.079 . ETH_00007970 69 KTVTSGK|SA 0.130 . ____________________________^_________________

  • Fasta :-

    >ETH_00007970 ATGATGTGTCCGATAGCGACAGGACCTAATGCTATTCCAGTCTCCCTAGAACGGGGGAAC CACCTCCTCAACACGGTAGAGGAAAACAAAATGAGCGATGAGGCCGTGCAGGGGACTCAG CCGCCTTCGGAAGCGTGGTTGGAGTCTGGGCCGAAGCCGGTGCGGAGTGAAGAGGCTCCG TGCGGGAAGACGGTTACAAGCGGGAAATCTGCAGAAGCGACAGAAGAAGACTGCCTGACA GAAGCAATAGAGACTATGCCGCACTAG
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  • Fasta :-

    No Results
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IDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_0000797067 SKTVTSGKSA0.995unspETH_0000797070 STSGKSAEAT0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India