ETH_00008070 | hypothetical protein

  • Computed_GO_Component_IDs:        

  • Computed_GO_Components:        

  • Computed_GO_Function_IDs:  GO:0005524      

  • Computed_GO_Functions:  ATP binding      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
ETH_00008070OTHER0.9999600.0000210.000019
No Results

  • Fasta :-

    >ETH_00008070 MNEEVQKAVTSELNKLSSLDQSSSEFHVCRAYIENLLKLPWGEYTTDCTDIEEAARVLDR DHFGLEDVKKRILEFIAVNILKKDSQGKILCFVGPPGVGKTSVAESIARALKRKYYRISL GGLFDVAELRGHRRTYIGALPGKIINALKLSGTMNPLIVLDEIDKLGRDFRGDPASALLE VLDPSQNNLFRDHYVDAPVDLSRVLFVCTANAQDAIPGPNPKP
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00008070.fa Sequence name : ETH_00008070 Sequence length : 223 VALUES OF COMPUTED PARAMETERS Coef20 : 3.641 CoefTot : -0.134 ChDiff : -2 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 0.724 1.306 0.011 0.486 MesoH : -1.017 0.239 -0.413 0.131 MuHd_075 : 14.832 10.110 4.636 2.835 MuHd_095 : 34.104 27.766 10.026 8.124 MuHd_100 : 24.615 23.049 7.569 6.632 MuHd_105 : 11.270 14.604 4.075 4.123 Hmax_075 : -4.433 5.133 -2.898 1.867 Hmax_095 : 7.175 13.475 0.464 4.147 Hmax_100 : 2.500 10.900 -1.233 3.520 Hmax_105 : -2.300 5.500 -2.491 2.030 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9185 0.0815 DFMC : 0.9592 0.0408
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 223 ETH_00008070 MNEEVQKAVTSELNKLSSLDQSSSEFHVCRAYIENLLKLPWGEYTTDCTDIEEAARVLDRDHFGLEDVKKRILEFIAVNI 80 LKKDSQGKILCFVGPPGVGKTSVAESIARALKRKYYRISLGGLFDVAELRGHRRTYIGALPGKIINALKLSGTMNPLIVL 160 DEIDKLGRDFRGDPASALLEVLDPSQNNLFRDHYVDAPVDLSRVLFVCTANAQDAIPGPNPKP 240 ................................................................................ 80 ................................................................................ 160 ............................................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00008070 7 MNEEVQK|AV 0.086 . ETH_00008070 15 VTSELNK|LS 0.062 . ETH_00008070 30 SEFHVCR|AY 0.107 . ETH_00008070 38 YIENLLK|LP 0.057 . ETH_00008070 56 DIEEAAR|VL 0.079 . ETH_00008070 60 AARVLDR|DH 0.126 . ETH_00008070 69 FGLEDVK|KR 0.051 . ETH_00008070 70 GLEDVKK|RI 0.101 . ETH_00008070 71 LEDVKKR|IL 0.211 . ETH_00008070 82 IAVNILK|KD 0.068 . ETH_00008070 83 AVNILKK|DS 0.137 . ETH_00008070 88 KKDSQGK|IL 0.071 . ETH_00008070 100 GPPGVGK|TS 0.062 . ETH_00008070 109 VAESIAR|AL 0.080 . ETH_00008070 112 SIARALK|RK 0.091 . ETH_00008070 113 IARALKR|KY 0.181 . ETH_00008070 114 ARALKRK|YY 0.156 . ETH_00008070 117 LKRKYYR|IS 0.142 . ETH_00008070 130 FDVAELR|GH 0.074 . ETH_00008070 133 AELRGHR|RT 0.128 . ETH_00008070 134 ELRGHRR|TY 0.190 . ETH_00008070 143 IGALPGK|II 0.069 . ETH_00008070 149 KIINALK|LS 0.068 . ETH_00008070 165 VLDEIDK|LG 0.055 . ETH_00008070 168 EIDKLGR|DF 0.089 . ETH_00008070 171 KLGRDFR|GD 0.281 . ETH_00008070 191 SQNNLFR|DH 0.108 . ETH_00008070 203 APVDLSR|VL 0.085 . ETH_00008070 222 IPGPNPK|P- 0.070 . ____________________________^_________________

  • Fasta :-

    >ETH_00008070 ATGAACGAAGAGGTTCAGAAGGCGGTGACTAGCGAGCTCAACAAACTCTCTTCTCTAGAC CAGTCTTCTTCTGAATTTCATGTTTGTCGAGCTTATATTGAAAACCTGCTGAAGCTGCCT TGGGGAGAGTACACCACGGACTGCACAGACATTGAAGAGGCCGCGAGGGTTTTAGACAGA GACCACTTTGGCCTCGAGGACGTAAAGAAACGCATTTTAGAGTTTATAGCTGTCAACATT CTGAAGAAGGATTCTCAAGGCAAGATTCTGTGTTTCGTGGGTCCCCCTGGGGTGGGCAAG ACCTCCGTAGCGGAGAGCATTGCGAGGGCTTTGAAGCGAAAGTATTACCGCATATCTCTA GGGGGTTTGTTTGACGTGGCCGAGCTGCGGGGCCACCGCCGAACTTACATCGGGGCCCTT CCGGGAAAAATAATAAACGCTTTGAAGTTGTCGGGAACAATGAATCCTTTGATAGTTTTG GACGAGATTGACAAACTCGGGAGGGACTTTCGAGGAGACCCCGCCTCTGCACTTCTCGAA GTTTTAGACCCTTCGCAAAACAATTTATTTCGAGACCATTATGTCGACGCCCCTGTGGAC TTGTCGAGGGTTTTGTTTGTTTGCACTGCCAACGCCCAAGACGCCATTCCAGGTCCAAAC CCTAAACCCTAA
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  • Fasta :-

    MNEEVQKAVTSELNKLSSLDQSSSEFHVCRAYIENLLKLPWGEYTTDCTDIEEAARVLDR DHFGLEDVKKRILEFIAVNILKKDSQGKILCFVGPPGVGKTSVAESIARALKRKYYRISL GGLFDVAELRGHRRTYIGALPGKIINALKLSGTMNPLIVLDEIDKLGRDFRGDPASALLE VLDPSQNNLFRDHYVDAPVDLSRVLFVCTANAQDAIPGPNPKP

  • title: ATP binding site
  • coordinates: P95,P96,G97,V98,G99,K100,T101,S102,D161,N211
No Results
No Results
No Results

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India