ETH_00009130 | sterol-regulatory element binding protein site 2 protease, putative

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  • Fasta :-

    >ETH_00009130 MAPQPQGGGPRITATGDIIWPGPNPSTRQQGLALPLAAGGQQQQQQQGIACVSAFTVLLC LIGLCLHEFAHAATAYQAGVEGVAESGYLTCDLIRYVGILDVLIFVFFVATGGIVLPGGR VNIDERAVRSRGWKTAIALAGPATNLLLGMLGSFCVQVYILAASANPSIIPLPIIGLICF IFLQFMSAVVNLIPFPPLE
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00009130.fa Sequence name : ETH_00009130 Sequence length : 199 VALUES OF COMPUTED PARAMETERS Coef20 : 3.036 CoefTot : -4.130 ChDiff : -1 ZoneTo : 67 KR : 2 DE : 1 CleavSite : 30 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.288 2.624 0.718 0.909 MesoH : 1.037 1.403 0.126 0.554 MuHd_075 : 22.080 16.619 7.016 5.021 MuHd_095 : 30.333 17.979 8.865 5.609 MuHd_100 : 30.121 16.846 8.284 5.885 MuHd_105 : 35.117 17.422 9.165 6.894 Hmax_075 : 12.833 10.850 2.854 4.830 Hmax_095 : 11.300 7.300 1.716 4.110 Hmax_100 : 11.300 8.100 1.609 4.110 Hmax_105 : 11.900 10.000 2.420 4.570 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9378 0.0622 DFMC : 0.9571 0.0429
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 199 ETH_00009130 MAPQPQGGGPRITATGDIIWPGPNPSTRQQGLALPLAAGGQQQQQQQGIACVSAFTVLLCLIGLCLHEFAHAATAYQAGV 80 EGVAESGYLTCDLIRYVGILDVLIFVFFVATGGIVLPGGRVNIDERAVRSRGWKTAIALAGPATNLLLGMLGSFCVQVYI 160 LAASANPSIIPLPIIGLICFIFLQFMSAVVNLIPFPPLE 240 ................................................................................ 80 ................................................................................ 160 ....................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00009130 11 PQGGGPR|IT 0.093 . ETH_00009130 28 GPNPSTR|QQ 0.159 . ETH_00009130 95 LTCDLIR|YV 0.122 . ETH_00009130 120 IVLPGGR|VN 0.069 . ETH_00009130 126 RVNIDER|AV 0.109 . ETH_00009130 129 IDERAVR|SR 0.403 . ETH_00009130 131 ERAVRSR|GW 0.163 . ETH_00009130 134 VRSRGWK|TA 0.205 . ____________________________^_________________

  • Fasta :-

    >ETH_00009130 ATGGCGCCGCAGCCGCAAGGCGGAGGCCCTCGTATAACAGCAACGGGCGATATTATTTGG CCTGGGCCCAACCCCAGCACGCGACAGCAGGGTCTAGCGCTCCCTTTGGCTGCAGGAGGC CAGCAGCAGCAGCAGCAGCAAGGTATTGCTTGTGTTTCTGCCTTCACAGTGCTGCTGTGT CTTATTGGCCTTTGCCTCCACGAATTCGCACATGCGGCTACTGCCTACCAAGCTGGGGTG GAGGGCGTGGCTGAGTCGGGGTACCTGACATGCGACTTGATTCGCTACGTGGGGATCCTT GACGTTCTTATTTTTGTGTTCTTTGTGGCCACCGGAGGAATCGTGTTGCCTGGAGGCAGA GTGAACATAGATGAACGCGCAGTGCGCAGCCGCGGGTGGAAAACAGCCATAGCGCTGGCC GGGCCCGCCACCAACTTGCTGCTTGGCATGCTGGGCAGTTTTTGTGTCCAAGTTTATATT TTAGCTGCAAGTGCAAATCCTTCAATCATTCCTCTGCCTATTATCGGCCTTATTTGCTTC ATTTTCTTGCAGTTCATGTCGGCAGTGGTGAACCTCATCCCCTTCCCTCCTCTCGAGTGA
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  • Fasta :-

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  • title: active site
  • coordinates: H67,E68,H71,N191
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India