ETH_00009675 | proteasome subunit beta type 5, putative

_IDPredictionOTHERSPmTPCS_Position
ETH_00009675OTHER0.9724190.0274230.000159
No Results

  • Fasta :-

    >ETH_00009675 MGPPGAPASGGPSMGFKKGTTTLAFIYKGGIVIAVDSRASMGVAISSQTVCKVLEISSII LGTMAGGAADCSYWERYLSKLCALFEHRNQEKIPVAAASNLLANIFYAWRGYGLCCGTMI AGWNPNSEEPELYYVDDKATRLKGNLFSCGSGSTFAYGVLDNSYRWDMSEAEAVELGRRA IYHAAHRDGGSGGLCRVYCCYRGGWRRVVAGDDISEMHYAYAAEQ
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00009675.fa Sequence name : ETH_00009675 Sequence length : 225 VALUES OF COMPUTED PARAMETERS Coef20 : 2.489 CoefTot : -2.581 ChDiff : 0 ZoneTo : 69 KR : 5 DE : 2 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.347 1.506 0.236 0.605 MesoH : 0.294 0.683 -0.098 0.311 MuHd_075 : 29.289 18.832 8.063 6.519 MuHd_095 : 22.087 15.830 6.652 5.226 MuHd_100 : 29.254 19.721 9.095 5.998 MuHd_105 : 34.726 21.290 9.861 6.618 Hmax_075 : 15.983 18.083 3.962 4.678 Hmax_095 : 16.100 18.988 2.700 5.950 Hmax_100 : 13.800 21.600 3.900 5.320 Hmax_105 : 13.767 19.017 3.900 6.010 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9916 0.0084 DFMC : 0.9778 0.0222
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 225 ETH_00009675 MGPPGAPASGGPSMGFKKGTTTLAFIYKGGIVIAVDSRASMGVAISSQTVCKVLEISSIILGTMAGGAADCSYWERYLSK 80 LCALFEHRNQEKIPVAAASNLLANIFYAWRGYGLCCGTMIAGWNPNSEEPELYYVDDKATRLKGNLFSCGSGSTFAYGVL 160 DNSYRWDMSEAEAVELGRRAIYHAAHRDGGSGGLCRVYCCYRGGWRRVVAGDDISEMHYAYAAEQ 240 ................................................................................ 80 ................................................................................ 160 ................................................................. 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00009675 17 GPSMGFK|KG 0.073 . ETH_00009675 18 PSMGFKK|GT 0.131 . ETH_00009675 28 TLAFIYK|GG 0.072 . ETH_00009675 38 VIAVDSR|AS 0.090 . ETH_00009675 52 SSQTVCK|VL 0.074 . ETH_00009675 76 DCSYWER|YL 0.119 . ETH_00009675 80 WERYLSK|LC 0.064 . ETH_00009675 88 CALFEHR|NQ 0.089 . ETH_00009675 92 EHRNQEK|IP 0.063 . ETH_00009675 110 NIFYAWR|GY 0.091 . ETH_00009675 138 LYYVDDK|AT 0.066 . ETH_00009675 141 VDDKATR|LK 0.082 . ETH_00009675 143 DKATRLK|GN 0.062 . ETH_00009675 165 VLDNSYR|WD 0.082 . ETH_00009675 178 EAVELGR|RA 0.081 . ETH_00009675 179 AVELGRR|AI 0.110 . ETH_00009675 187 IYHAAHR|DG 0.128 . ETH_00009675 196 GSGGLCR|VY 0.092 . ETH_00009675 202 RVYCCYR|GG 0.076 . ETH_00009675 206 CYRGGWR|RV 0.095 . ETH_00009675 207 YRGGWRR|VV 0.199 . ____________________________^_________________

  • Fasta :-

    >ETH_00009675 ATGGGGCCCCCGGGGGCCCCTGCCTCGGGGGGCCCCTCAATGGGGTTTAAAAAGGGGACT ACAACCCTGGCCTTTATCTACAAGGGAGGAATTGTAATTGCCGTCGACAGCCGCGCCTCC ATGGGCGTCGCCATCAGCAGCCAAACAGTTTGCAAAGTTTTGGAGATTTCCAGCATCATT TTAGGCACTATGGCTGGGGGCGCTGCGGACTGCAGTTACTGGGAAAGGTACTTGTCCAAA CTTTGCGCTTTATTTGAACACAGAAATCAAGAAAAGATTCCTGTGGCAGCAGCTTCGAAT CTTTTGGCAAACATTTTCTACGCCTGGAGAGGCTATGGCCTTTGCTGCGGGACAATGATT GCTGGCTGGAATCCAAACAGCGAAGAGCCCGAGCTCTACTACGTAGACGACAAGGCCACC CGCCTCAAGGGAAATCTCTTTTCTTGCGGCAGCGGCAGCACTTTCGCCTATGGTGTTCTA GACAACAGCTATAGATGGGACATGAGCGAGGCGGAAGCTGTTGAGTTGGGGCGAAGGGCC ATTTACCACGCGGCCCACAGAGACGGCGGCTCGGGGGGCCTTTGCAGAGTTTACTGCTGC TACCGCGGCGGCTGGCGGCGGGTGGTGGCTGGAGACGACATAAGCGAAATGCATTACGCA TATGCAGCTGAACAAG
  • Download Fasta

  • Fasta :-

    MGPPGAPASGGPSMGFKKGTTTLAFIYKGGIVIAVDSRASMGVAISSQTVCKVLEISSII LGTMAGGAADCSYWERYLSKLCALFEHRNQEKIPVAAASNLLANIFYAWRGYGLCCGTMI AGWNPNSEEPELYYVDDKATRLKGNLFSCGSGSTFAYGVLDNSYRWDMSEAEAVELGRRA IYHAAHRDGGSGGLCRVYCCYRGGWRRVVAGDDISEMHYAYAAEQ

  • title: active site
  • coordinates: T20,D36,R38,K52,S151,D188,S191,G192
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Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India