ETH_00009820 | Rhomboid-like protease 4

  • Computed_GO_Component_IDs:  GO:0016021      

  • Computed_GO_Components:  integral component of membrane      

  • Computed_GO_Function_IDs:  GO:0004252      

  • Computed_GO_Functions:  serine-type endopeptidase activity      

  • Computed_GO_Process_IDs:        

  • Computed_GO_Processes:        

  • Curated_GO_Component_IDs:        

  • Curated_GO_Components:        

  • Curated_GO_Function_IDs:        

  • Curated_GO_Functions:        

  • Curated_GO_Processes:        

_IDPredictionOTHERSPmTPCS_Position
ETH_00009820OTHER1.0000000.0000000.000000
No Results

  • Fasta :-

    >ETH_00009820 MQEGMPEVPIVPLKGPHSRRSQAHRMSQVAPAEGEGPVLLSAASSPQPSGSQLQRSGISN ASRVGTTSAAAAAAEAAAATAPAAAASAAAAAAADAAAAAAAAAAEAAAAAAAGAPLGGA GEEAAAPPADPAAAEAAAAAATAEEGAPFDEAALHTLPSGEVGRRAPVNPLHSPFFAKLG INKNRKRKRKVKDPKLLNNPLRGRLVVCISTTALLLWLFFWELLYNYTSFNGRCVSSVQY PLYTLSEESQRAPMVIRYGYGACEYNLGPLGAPRGPLGAPASDKGWPVELVKNGAAGASA AAWDSPNSRILTAFGGLETNYIRNYGEVFRVFSAMYLHGGFLHIAINLLCQIQSLWMLEP DWGFWRTALLFFVGGISGNLLSAVADPCNITVGSSGAMYSLMGALIPYCVEYWKTIPRPC CILMFFIVVLLIGIVTGLSGFTDNYAHIGGGLGGCLFGFATITTVAACDKCTLGERLAAT KPFSFCLPKKTQEQLLQRAQARKAEAVKRRKMEIASKKKASGARGKAIRAVKLRVEEEGR PPCKMAAREWIVRISCFAALTAYWVSLFVVLLEENSYRNYEPPGQLKFEGWLYCKCGYIK YVARQTTWNLNMFWCFGNETDANFYLKA
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00009820.fa Sequence name : ETH_00009820 Sequence length : 628 VALUES OF COMPUTED PARAMETERS Coef20 : 2.974 CoefTot : -0.155 ChDiff : 16 ZoneTo : 2 KR : 0 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 2.682 3.141 0.741 1.015 MesoH : 1.079 1.295 0.167 0.537 MuHd_075 : 20.217 11.809 6.332 2.868 MuHd_095 : 28.064 11.023 7.261 4.255 MuHd_100 : 28.904 11.724 7.808 3.927 MuHd_105 : 23.797 9.893 6.244 2.534 Hmax_075 : 15.517 12.250 1.952 5.110 Hmax_095 : 11.025 6.300 0.996 4.040 Hmax_100 : 13.800 9.800 1.583 4.560 Hmax_105 : 5.900 1.700 -1.563 2.250 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9935 0.0065 DFMC : 0.9925 0.0075
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 628 ETH_00009820 MQEGMPEVPIVPLKGPHSRRSQAHRMSQVAPAEGEGPVLLSAASSPQPSGSQLQRSGISNASRVGTTSAAAAAAEAAAAT 80 APAAAASAAAAAAADAAAAAAAAAAEAAAAAAAGAPLGGAGEEAAAPPADPAAAEAAAAAATAEEGAPFDEAALHTLPSG 160 EVGRRAPVNPLHSPFFAKLGINKNRKRKRKVKDPKLLNNPLRGRLVVCISTTALLLWLFFWELLYNYTSFNGRCVSSVQY 240 PLYTLSEESQRAPMVIRYGYGACEYNLGPLGAPRGPLGAPASDKGWPVELVKNGAAGASAAAWDSPNSRILTAFGGLETN 320 YIRNYGEVFRVFSAMYLHGGFLHIAINLLCQIQSLWMLEPDWGFWRTALLFFVGGISGNLLSAVADPCNITVGSSGAMYS 400 LMGALIPYCVEYWKTIPRPCCILMFFIVVLLIGIVTGLSGFTDNYAHIGGGLGGCLFGFATITTVAACDKCTLGERLAAT 480 KPFSFCLPKKTQEQLLQRAQARKAEAVKRRKMEIASKKKASGARGKAIRAVKLRVEEEGRPPCKMAAREWIVRISCFAAL 560 TAYWVSLFVVLLEENSYRNYEPPGQLKFEGWLYCKCGYIKYVARQTTWNLNMFWCFGNETDANFYLKA 640 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 .................................................................... 640 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00009820 14 VPIVPLK|GP 0.068 . ETH_00009820 19 LKGPHSR|RS 0.112 . ETH_00009820 20 KGPHSRR|SQ 0.221 . ETH_00009820 25 RRSQAHR|MS 0.164 . ETH_00009820 55 SGSQLQR|SG 0.131 . ETH_00009820 63 GISNASR|VG 0.093 . ETH_00009820 164 PSGEVGR|RA 0.094 . ETH_00009820 165 SGEVGRR|AP 0.115 . ETH_00009820 178 HSPFFAK|LG 0.066 . ETH_00009820 183 AKLGINK|NR 0.056 . ETH_00009820 185 LGINKNR|KR 0.095 . ETH_00009820 186 GINKNRK|RK 0.088 . ETH_00009820 187 INKNRKR|KR 0.140 . ETH_00009820 188 NKNRKRK|RK 0.230 . ETH_00009820 189 KNRKRKR|KV 0.339 . ETH_00009820 190 NRKRKRK|VK 0.466 . ETH_00009820 192 KRKRKVK|DP 0.159 . ETH_00009820 195 RKVKDPK|LL 0.070 . ETH_00009820 202 LLNNPLR|GR 0.102 . ETH_00009820 204 NNPLRGR|LV 0.090 . ETH_00009820 233 YTSFNGR|CV 0.174 . ETH_00009820 251 LSEESQR|AP 0.090 . ETH_00009820 257 RAPMVIR|YG 0.089 . ETH_00009820 274 GPLGAPR|GP 0.089 . ETH_00009820 284 GAPASDK|GW 0.068 . ETH_00009820 292 WPVELVK|NG 0.060 . ETH_00009820 309 WDSPNSR|IL 0.116 . ETH_00009820 323 LETNYIR|NY 0.101 . ETH_00009820 330 NYGEVFR|VF 0.092 . ETH_00009820 366 PDWGFWR|TA 0.079 . ETH_00009820 414 YCVEYWK|TI 0.057 . ETH_00009820 418 YWKTIPR|PC 0.084 . ETH_00009820 470 TVAACDK|CT 0.065 . ETH_00009820 476 KCTLGER|LA 0.079 . ETH_00009820 481 ERLAATK|PF 0.068 . ETH_00009820 489 FSFCLPK|KT 0.069 . ETH_00009820 490 SFCLPKK|TQ 0.113 . ETH_00009820 498 QEQLLQR|AQ 0.078 . ETH_00009820 502 LQRAQAR|KA 0.186 . ETH_00009820 503 QRAQARK|AE 0.095 . ETH_00009820 508 RKAEAVK|RR 0.060 . ETH_00009820 509 KAEAVKR|RK 0.164 . ETH_00009820 510 AEAVKRR|KM 0.200 . ETH_00009820 511 EAVKRRK|ME 0.080 . ETH_00009820 517 KMEIASK|KK 0.061 . ETH_00009820 518 MEIASKK|KA 0.159 . ETH_00009820 519 EIASKKK|AS 0.140 . ETH_00009820 524 KKASGAR|GK 0.092 . ETH_00009820 526 ASGARGK|AI 0.079 . ETH_00009820 529 ARGKAIR|AV 0.129 . ETH_00009820 532 KAIRAVK|LR 0.105 . ETH_00009820 534 IRAVKLR|VE 0.145 . ETH_00009820 540 RVEEEGR|PP 0.072 . ETH_00009820 544 EGRPPCK|MA 0.069 . ETH_00009820 548 PCKMAAR|EW 0.097 . ETH_00009820 553 AREWIVR|IS 0.086 . ETH_00009820 578 LEENSYR|NY 0.097 . ETH_00009820 587 EPPGQLK|FE 0.064 . ETH_00009820 595 EGWLYCK|CG 0.056 . ETH_00009820 600 CKCGYIK|YV 0.081 . ETH_00009820 604 YIKYVAR|QT 0.142 . ETH_00009820 627 DANFYLK|A- 0.070 . ____________________________^_________________

  • Fasta :-

    >ETH_00009820 ATGCAAGAGGGAATGCCGGAGGTCCCCATTGTACCACTGAAGGGGCCGCACAGTCGACGA TCTCAAGCCCACAGAATGTCTCAGGTGGCGCCGGCGGAGGGCGAGGGGCCTGTGCTGCTG TCGGCTGCGAGCAGTCCGCAGCCTTCGGGGTCTCAGCTGCAGCGAAGTGGAATTTCAAAT GCCAGCCGGGTGGGAACGACCTCCGCAGCAGCAGCAGCAGCAGAGGCTGCAGCAGCAACG GCGCCAGCTGCAGCAGCGTCTGCAGCAGCAGCAGCGGCAGCGGACGCCGCCGCCGCAGCA GCAGCTGCTGCTGCGGAGGCCGCAGCAGCAGCAGCAGCAGGAGCGCCGCTGGGCGGAGCG GGCGAGGAGGCCGCAGCGCCGCCCGCAGACCCTGCTGCTGCAGAAGCAGCAGCAGCAGCA GCAACAGCAGAAGAGGGGGCCCCCTTCGACGAAGCTGCGCTGCACACGCTGCCCTCCGGA GAAGTGGGAAGAAGGGCCCCCGTAAACCCTCTTCATTCTCCCTTTTTTGCAAAGCTTGGA ATTAATAAAAACAGAAAAAGAAAAAGAAAAGTTAAAGATCCAAAACTTTTAAATAATCCT CTGCGAGGCAGACTCGTCGTCTGCATCAGCACCACCGCCCTCCTCCTCTGGCTCTTCTTC TGGGAGCTGCTGTACAACTACACGAGTTTCAACGGGCGCTGCGTCAGCTCCGTGCAGTAC CCCCTCTATACCCTCTCCGAAGAGTCGCAGAGGGCCCCCATGGTGATCAGGTACGGGTAC GGGGCCTGCGAGTACAACTTGGGGCCCCTGGGGGCCCCCCGGGGGCCCCTGGGGGCCCCC GCGAGCGACAAGGGGTGGCCCGTGGAGCTCGTGAAGAACGGAGCAGCAGGAGCTTCTGCT GCTGCTTGGGACTCCCCGAACAGCCGCATTTTGACGGCTTTTGGCGGACTTGAAACGAAT TACATTCGCAATTACGGAGAAGTTTTTCGAGTTTTCTCCGCCATGTACCTCCACGGCGGC TTCCTCCACATCGCCATCAACCTCCTCTGCCAAATCCAGAGCCTCTGGATGCTCGAGCCC GACTGGGGTTTTTGGCGGACAGCGTTGCTGTTTTTCGTGGGAGGCATTAGCGGGAATTTG CTGTCAGCAGTTGCGGACCCCTGCAACATAACTGTGGGGTCTTCGGGGGCCATGTACAGC CTCATGGGGGCTTTGATTCCTTACTGCGTTGAATACTGGAAGACAATTCCTCGGCCGTGC TGCATTTTGATGTTCTTCATAGTTGTGTTGCTGATCGGGATCGTGACGGGGCTCTCGGGC TTCACCGACAACTACGCGCACATCGGCGGAGGCCTCGGGGGCTGCCTCTTCGGCTTCGCC ACCATCACAACAGTGGCTGCTTGCGACAAGTGCACTTTGGGGGAGCGTTTGGCGGCCACC AAGCCCTTCAGCTTTTGCCTGCCGAAGAAGACGCAGGAGCAGCTGCTCCAGCGCGCCCAG GCCAGGAAGGCGGAGGCGGTGAAGCGGCGAAAGATGGAAATCGCCTCCAAGAAAAAAGCC TCGGGCGCTCGAGGGAAAGCAATTAGAGCTGTGAAGCTTCGCGTGGAGGAGGAAGGCAGG CCTCCCTGCAAAATGGCCGCGAGAGAGTGGATCGTCCGCATTTCCTGTTTCGCCGCGCTG ACGGCTTATTGGGTTTCTCTTTTTGTTGTGCTGCTGGAGGAAAACAGCTACAGGAACTAC GAGCCTCCGGGGCAGCTGAAGTTTGAAGGCTGGCTTTATTGCAAATGTGGATATATAAAA TATGTTGCAAGACAAACAACTTGGAACTTGAACATGTTTTGGTGTTTTGGAAACGAAACC GACGCCAACTTCTACCTCAAGGCCTAG
  • Download Fasta

  • Fasta :-

    MQEGMPEVPIVPLKGPHSRRSQAHRMSQVAPAEGEGPVLLSAASSPQPSGSQLQRSGISN ASRVGTTSAAAAAAEAAAATAPAAAASAAAAAAADAAAAAAAAAAEAAAAAAAGAPLGGA GEEAAAPPADPAAAEAAAAAATAEEGAPFDEAALHTLPSGEVGRRAPVNPLHSPFFAKLG INKNRKRKRKVKDPKLLNNPLRGRLVVCISTTALLLWLFFWELLYNYTSFNGRCVSSVQY PLYTLSEESQRAPMVIRYGYGACEYNLGPLGAPRGPLGAPASDKGWPVELVKNGAAGASA AAWDSPNSRILTAFGGLETNYIRNYGEVFRVFSAMYLHGGFLHIAINLLCQIQSLWMLEP DWGFWRTALLFFVGGISGNLLSAVADPCNITVGSSGAMYSLMGALIPYCVEYWKTIPRPC CILMFFIVVLLIGIVTGLSGFTDNYAHIGGGLGGCLFGFATITTVAACDKCTLGERLAAT KPFSFCLPKKTQEQLLQRAQARKAEAVKRRKMEIASKKKASGARGKAIRAVKLRVEEEGR PPCKMAAREWIVRISCFAALTAYWVSLFVVLLEENSYRNYEPPGQLKFEGWLYCKCGYIK YVARQTTWNLNMFWCFGNETDANFYLKA

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_0000982018 SKGPHSRRSQ0.991unspETH_00009820521 SKKKASGARG0.99unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India