ETH_00010035 | hypothetical protein, conserved

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  • Fasta :-

    >ETH_00010035 MPNTVVSSKETAGHPIESKRTEPGRDISQPIAGVGRPIPRNRDRDVGGHKESEMNQARME PGMAEFFRQFASQMALGLVHTSQRSIGYEDGKNMRNFLDLVELDFIERGLEERQWGEELK RYLTGDALGYWLYLRRTGVPLTDWEQLRQRFCAQFCNMTKERMKVMIAENVWRGDHHAYS ARFATIVAQGVSIAPDLLVGYYLANLPVEIYREITQGGTRKFADWQEAAAALATTAAPWR DS
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00010035.fa Sequence name : ETH_00010035 Sequence length : 242 VALUES OF COMPUTED PARAMETERS Coef20 : 3.522 CoefTot : -0.276 ChDiff : -1 ZoneTo : 9 KR : 1 DE : 0 CleavSite : 0 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.024 1.582 0.116 0.587 MesoH : -0.706 0.159 -0.424 0.190 MuHd_075 : 17.132 16.700 5.825 4.875 MuHd_095 : 24.453 17.460 7.660 3.980 MuHd_100 : 28.283 19.241 8.218 4.663 MuHd_105 : 24.950 16.092 6.932 3.943 Hmax_075 : 3.588 5.250 -0.875 2.546 Hmax_095 : 12.300 9.300 1.442 3.650 Hmax_100 : 12.300 9.300 1.442 3.650 Hmax_105 : 4.600 10.733 -0.607 3.320 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.9546 0.0454 DFMC : 0.9592 0.0408
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 242 ETH_00010035 MPNTVVSSKETAGHPIESKRTEPGRDISQPIAGVGRPIPRNRDRDVGGHKESEMNQARMEPGMAEFFRQFASQMALGLVH 80 TSQRSIGYEDGKNMRNFLDLVELDFIERGLEERQWGEELKRYLTGDALGYWLYLRRTGVPLTDWEQLRQRFCAQFCNMTK 160 ERMKVMIAENVWRGDHHAYSARFATIVAQGVSIAPDLLVGYYLANLPVEIYREITQGGTRKFADWQEAAAALATTAAPWR 240 DS 320 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 .. 320 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00010035 9 NTVVSSK|ET 0.064 . ETH_00010035 19 GHPIESK|RT 0.074 . ETH_00010035 20 HPIESKR|TE 0.143 . ETH_00010035 25 KRTEPGR|DI 0.202 . ETH_00010035 36 PIAGVGR|PI 0.092 . ETH_00010035 40 VGRPIPR|NR 0.086 . ETH_00010035 42 RPIPRNR|DR 0.183 . ETH_00010035 44 IPRNRDR|DV 0.344 . ETH_00010035 50 RDVGGHK|ES 0.062 . ETH_00010035 58 SEMNQAR|ME 0.094 . ETH_00010035 68 GMAEFFR|QF 0.116 . ETH_00010035 84 LVHTSQR|SI 0.206 . ETH_00010035 92 IGYEDGK|NM 0.062 . ETH_00010035 95 EDGKNMR|NF 0.082 . ETH_00010035 108 ELDFIER|GL 0.087 . ETH_00010035 113 ERGLEER|QW 0.129 . ETH_00010035 120 QWGEELK|RY 0.061 . ETH_00010035 121 WGEELKR|YL 0.142 . ETH_00010035 135 GYWLYLR|RT 0.085 . ETH_00010035 136 YWLYLRR|TG 0.090 . ETH_00010035 148 TDWEQLR|QR 0.104 . ETH_00010035 150 WEQLRQR|FC 0.099 . ETH_00010035 160 QFCNMTK|ER 0.061 . ETH_00010035 162 CNMTKER|MK 0.101 . ETH_00010035 164 MTKERMK|VM 0.064 . ETH_00010035 173 IAENVWR|GD 0.110 . ETH_00010035 182 HHAYSAR|FA 0.219 . ETH_00010035 212 LPVEIYR|EI 0.127 . ETH_00010035 220 ITQGGTR|KF 0.081 . ETH_00010035 221 TQGGTRK|FA 0.211 . ETH_00010035 240 TTAAPWR|DS 0.135 . ____________________________^_________________

  • Fasta :-

    >ETH_00010035 ATGCCTAATACAGTTGTATCAAGTAAAGAAACCGCGGGGCACCCTATTGAGTCGAAACGA ACAGAACCCGGTCGCGACATCAGCCAGCCCATCGCAGGGGTAGGCCGACCGATACCGAGA AATCGGGACCGCGACGTTGGAGGACACAAGGAATCCGAAATGAATCAAGCTAGGATGGAA CCGGGAATGGCCGAGTTCTTTCGGCAATTCGCCTCTCAGATGGCACTGGGGTTAGTGCAT ACGTCCCAGAGGTCCATTGGGTACGAGGACGGCAAGAACATGAGGAATTTCCTTGACCTT GTGGAGTTAGATTTCATTGAACGAGGGCTGGAGGAGCGGCAGTGGGGAGAAGAACTCAAA AGATATCTGACGGGCGACGCCTTGGGTTACTGGTTGTATCTGCGTCGCACGGGAGTACCC CTGACTGATTGGGAGCAACTGAGACAGCGATTCTGTGCGCAATTCTGTAACATGACAAAG GAGCGGATGAAAGTCATGATAGCGGAGAATGTATGGCGGGGTGATCACCACGCATACTCT GCGCGTTTTGCGACTATCGTGGCCCAAGGGGTATCCATAGCACCAGACCTGTTGGTGGGT TACTATTTGGCCAACCTCCCGGTAGAAATATACCGAGAGATAACTCAAGGGGGAACAAGG AAATTCGCGGACTGGCAGGAAGCAGCCGCAGCACTGGCTACCACGGCGGCACCGTGGAGG GATTCATGA
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  • Fasta :-

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IDSitePeptideScoreMethod
ETH_000100357 SNTVVSSKET0.997unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India