ETH_00010520 | hypothetical protein

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No Results
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  • Fasta :-

    >ETH_00010520 MPSGAPAHHRHATPKPTAAERPHAHKEEPQQVIPMTNVMPGDSPFVTWDQFQSGMSVIRT VIGGTGISGAAFPILPEDGSTMQAFLLLIERRYAHMGLEPLEWGSALIDHLVGPSLTYWM CLRRITDLSDWAAVQRRLLERFDKTMSQSQLLTELAKVGRNGNPKQYMDRFAAVAERGLG VAADELADYAPDYRQTSIF
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  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00010520.fa Sequence name : ETH_00010520 Sequence length : 199 VALUES OF COMPUTED PARAMETERS Coef20 : 3.018 CoefTot : -1.140 ChDiff : -3 ZoneTo : 19 KR : 2 DE : 0 CleavSite : 12 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.659 1.229 0.275 0.631 MesoH : 0.053 0.476 -0.226 0.322 MuHd_075 : 23.400 7.213 5.076 3.817 MuHd_095 : 13.582 5.230 2.415 2.868 MuHd_100 : 7.428 4.780 1.787 2.480 MuHd_105 : 3.059 4.684 2.219 2.264 Hmax_075 : 4.800 -0.000 -1.673 2.010 Hmax_095 : 4.900 -2.013 -2.264 1.680 Hmax_100 : 4.400 -1.600 -2.504 1.670 Hmax_105 : 2.567 -0.400 -1.893 2.030 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.8938 0.1062 DFMC : 0.7839 0.2161
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 199 ETH_00010520 MPSGAPAHHRHATPKPTAAERPHAHKEEPQQVIPMTNVMPGDSPFVTWDQFQSGMSVIRTVIGGTGISGAAFPILPEDGS 80 TMQAFLLLIERRYAHMGLEPLEWGSALIDHLVGPSLTYWMCLRRITDLSDWAAVQRRLLERFDKTMSQSQLLTELAKVGR 160 NGNPKQYMDRFAAVAERGLGVAADELADYAPDYRQTSIF 240 ................................................................................ 80 ................................................................................ 160 ....................................... 240 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00010520 10 GAPAHHR|HA 0.162 . ETH_00010520 15 HRHATPK|PT 0.113 . ETH_00010520 21 KPTAAER|PH 0.088 . ETH_00010520 26 ERPHAHK|EE 0.065 . ETH_00010520 59 SGMSVIR|TV 0.150 . ETH_00010520 91 FLLLIER|RY 0.066 . ETH_00010520 92 LLLIERR|YA 0.221 . ETH_00010520 123 TYWMCLR|RI 0.085 . ETH_00010520 124 YWMCLRR|IT 0.127 . ETH_00010520 136 DWAAVQR|RL 0.077 . ETH_00010520 137 WAAVQRR|LL 0.183 . ETH_00010520 141 QRRLLER|FD 0.104 . ETH_00010520 144 LLERFDK|TM 0.156 . ETH_00010520 157 LLTELAK|VG 0.060 . ETH_00010520 160 ELAKVGR|NG 0.104 . ETH_00010520 165 GRNGNPK|QY 0.085 . ETH_00010520 170 PKQYMDR|FA 0.147 . ETH_00010520 177 FAAVAER|GL 0.128 . ETH_00010520 194 DYAPDYR|QT 0.089 . ____________________________^_________________

  • Fasta :-

    >ETH_00010520 ATGCCGAGCGGCGCACCGGCCCATCATCGTCATGCTACTCCGAAGCCCACCGCGGCAGAA CGGCCGCATGCACATAAGGAGGAGCCCCAACAGGTGATACCTATGACGAATGTTATGCCA GGGGACAGTCCCTTCGTCACGTGGGATCAATTCCAGTCCGGTATGAGTGTGATAAGAACT GTTATAGGGGGGACCGGGATATCAGGCGCAGCTTTTCCCATACTACCAGAAGACGGCAGC ACTATGCAGGCTTTTCTGCTGCTCATCGAGCGCCGGTACGCCCATATGGGATTGGAGCCG CTCGAGTGGGGAAGCGCACTTATTGACCACCTTGTGGGCCCGTCTCTAACGTATTGGATG TGTCTACGGAGAATTACCGACCTAAGCGACTGGGCGGCAGTACAACGCAGGCTTTTGGAG CGGTTTGACAAAACAATGTCGCAGAGTCAATTGTTAACGGAGTTGGCTAAAGTAGGGCGG AATGGTAACCCGAAGCAATATATGGACCGGTTTGCGGCTGTAGCGGAGCGTGGTTTGGGT GTTGCCGCCGACGAACTCGCTGACTATGCACCGGACTACCGACAGACCTCCATCTTCTAA
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  • Fasta :-

    No Results
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No Results
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IDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_0001052013 THRHATPKPT0.996unspETH_0001052056 SQSGMSVIRT0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India