• Computed_GO_Component_IDs:        

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_IDPredictionOTHERSPmTPCS_Position
ETH_00010605OTHER0.9995890.0000100.000401
No Results
  • Fasta :-

    >ETH_00010605 MGSALSTGKHPLIDSSLVFPAPPSSYSCSSDGLLLLRSRFAITSGSPAAVPAFLVVPSPQ SHLKLAAALRTARLAAAAAEAAVAAAAAAGGLPPQQQQRRRSNIEGICASPAAVARTELS DGETERQQQLFQQLEQRRKELQQHMLVLQQLQREQRQQRVLRRRQTRRALTSQAEEPAST TAEAEGGEAEAAASVVAAAALTISSAADTPASQRESFLLSTSSEAGEASAAAASDAVLTA GKSGSYWDTEATGGGVGSDYCILYFHGNACDANMVRGWLQVVADELGIPILVFEYPGYGL LSGIASSSSGIDRCAKVALEFLVEQLQFPPEKIILCGRSIGTGPAAFLASRLAKCNLQLG GLVLISPFASMAALAADMADLPESLARLVVTHHWDTEAALKQCQGLPLCIIHGQEDEIIP VSHSRRLLSSALHSAALRVSHLPPHANHSIGLEPAAMREEVLQPLQLFLRKVRCAARLRR QQQLHHKKHLEAQARRAAAANAAATAVAAAAADSLVGHLQPQVSRLLRERTSCVGRWQFQ QQHEGQLKHDQRQQQCVKAASVSCDAVRYSAKASGAQSSTDRSSSSTKRCFSVKGRLTSP LTMQSAAFSLRHRPQHLEHMQQQQPLRRRSLKLVRSRLLEVDSSSTDDDTVEENIPQKEH GDEDIPESSLPASHKAEVAATLEAVDSDASETEADGAAVAADNSAARLPQSFYGDSDAEA SSAPVATVTAPNADFLRSRSTDTGTAATTPAARERISAARAFLASEAKIHRRLLLACRRM QQQQRLPIASANTFFTGKATAPAAAAGAPAVAAVAFSQQTRRLGTVGEAPGAAAAAAARG IKALHIPAASPCGKGDINGRTPAAAAFAAKQFLSRQRTCHSAVSEGERSKLGERSSLKQQ QHQHKQQQEEQQQQASRLLCSRRTIGSSARRAVSLTGGHMFCSQNAEQQ
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00010605.fa Sequence name : ETH_00010605 Sequence length : 949 VALUES OF COMPUTED PARAMETERS Coef20 : 3.631 CoefTot : 0.945 ChDiff : 16 ZoneTo : 104 KR : 9 DE : 3 CleavSite : 101 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.965 1.871 0.320 0.702 MesoH : 0.256 0.828 -0.100 0.338 MuHd_075 : 22.490 18.179 7.352 5.012 MuHd_095 : 25.352 13.387 5.613 5.257 MuHd_100 : 30.944 12.970 6.987 5.871 MuHd_105 : 37.033 18.133 8.445 7.497 Hmax_075 : 13.300 16.683 3.088 6.183 Hmax_095 : 12.775 12.338 2.271 4.594 Hmax_100 : 12.200 15.000 2.323 4.820 Hmax_105 : 12.133 12.163 1.876 4.174 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.7417 0.2583 DFMC : 0.2181 0.7819 This protein is probably imported in mitochondria. f(Ser) = 0.1442 f(Arg) = 0.0673 CMi = 0.87822 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 949 ETH_00010605 MGSALSTGKHPLIDSSLVFPAPPSSYSCSSDGLLLLRSRFAITSGSPAAVPAFLVVPSPQSHLKLAAALRTARLAAAAAE 80 AAVAAAAAAGGLPPQQQQRRRSNIEGICASPAAVARTELSDGETERQQQLFQQLEQRRKELQQHMLVLQQLQREQRQQRV 160 LRRRQTRRALTSQAEEPASTTAEAEGGEAEAAASVVAAAALTISSAADTPASQRESFLLSTSSEAGEASAAAASDAVLTA 240 GKSGSYWDTEATGGGVGSDYCILYFHGNACDANMVRGWLQVVADELGIPILVFEYPGYGLLSGIASSSSGIDRCAKVALE 320 FLVEQLQFPPEKIILCGRSIGTGPAAFLASRLAKCNLQLGGLVLISPFASMAALAADMADLPESLARLVVTHHWDTEAAL 400 KQCQGLPLCIIHGQEDEIIPVSHSRRLLSSALHSAALRVSHLPPHANHSIGLEPAAMREEVLQPLQLFLRKVRCAARLRR 480 QQQLHHKKHLEAQARRAAAANAAATAVAAAAADSLVGHLQPQVSRLLRERTSCVGRWQFQQQHEGQLKHDQRQQQCVKAA 560 SVSCDAVRYSAKASGAQSSTDRSSSSTKRCFSVKGRLTSPLTMQSAAFSLRHRPQHLEHMQQQQPLRRRSLKLVRSRLLE 640 VDSSSTDDDTVEENIPQKEHGDEDIPESSLPASHKAEVAATLEAVDSDASETEADGAAVAADNSAARLPQSFYGDSDAEA 720 SSAPVATVTAPNADFLRSRSTDTGTAATTPAARERISAARAFLASEAKIHRRLLLACRRMQQQQRLPIASANTFFTGKAT 800 APAAAAGAPAVAAVAFSQQTRRLGTVGEAPGAAAAAAARGIKALHIPAASPCGKGDINGRTPAAAAFAAKQFLSRQRTCH 880 SAVSEGERSKLGERSSLKQQQHQHKQQQEEQQQQASRLLCSRRTIGSSARRAVSLTGGHMFCSQNAEQQ 960 ................................................................................ 80 ................................................................................ 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ................................................................................ 720 ................................................................................ 800 ................................................................................ 880 ..................................................................... 960 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 0 Name Pos Context Score Pred ____________________________v_________________ ETH_00010605 9 SALSTGK|HP 0.054 . ETH_00010605 37 DGLLLLR|SR 0.095 . ETH_00010605 39 LLLLRSR|FA 0.097 . ETH_00010605 64 SPQSHLK|LA 0.082 . ETH_00010605 70 KLAAALR|TA 0.095 . ETH_00010605 73 AALRTAR|LA 0.243 . ETH_00010605 99 PPQQQQR|RR 0.116 . ETH_00010605 100 PQQQQRR|RS 0.132 . ETH_00010605 101 QQQQRRR|SN 0.332 . ETH_00010605 116 SPAAVAR|TE 0.103 . ETH_00010605 126 SDGETER|QQ 0.082 . ETH_00010605 137 FQQLEQR|RK 0.100 . ETH_00010605 138 QQLEQRR|KE 0.104 . ETH_00010605 139 QLEQRRK|EL 0.084 . ETH_00010605 153 VLQQLQR|EQ 0.085 . ETH_00010605 156 QLQREQR|QQ 0.202 . ETH_00010605 159 REQRQQR|VL 0.237 . ETH_00010605 162 RQQRVLR|RR 0.179 . ETH_00010605 163 QQRVLRR|RQ 0.112 . ETH_00010605 164 QRVLRRR|QT 0.219 . ETH_00010605 167 LRRRQTR|RA 0.480 . ETH_00010605 168 RRRQTRR|AL 0.260 . ETH_00010605 214 DTPASQR|ES 0.068 . ETH_00010605 242 AVLTAGK|SG 0.067 . ETH_00010605 276 CDANMVR|GW 0.110 . ETH_00010605 313 SSSGIDR|CA 0.148 . ETH_00010605 316 GIDRCAK|VA 0.118 . ETH_00010605 332 LQFPPEK|II 0.069 . ETH_00010605 338 KIILCGR|SI 0.227 . ETH_00010605 351 AAFLASR|LA 0.077 . ETH_00010605 354 LASRLAK|CN 0.196 . ETH_00010605 387 LPESLAR|LV 0.122 . ETH_00010605 401 DTEAALK|QC 0.056 . ETH_00010605 425 IPVSHSR|RL 0.083 . ETH_00010605 426 PVSHSRR|LL 0.263 . ETH_00010605 438 LHSAALR|VS 0.076 . ETH_00010605 458 LEPAAMR|EE 0.069 . ETH_00010605 470 PLQLFLR|KV 0.099 . ETH_00010605 471 LQLFLRK|VR 0.068 . ETH_00010605 473 LFLRKVR|CA 0.236 . ETH_00010605 477 KVRCAAR|LR 0.099 . ETH_00010605 479 RCAARLR|RQ 0.073 . ETH_00010605 480 CAARLRR|QQ 0.299 . ETH_00010605 487 QQQLHHK|KH 0.060 . ETH_00010605 488 QQLHHKK|HL 0.139 . ETH_00010605 495 HLEAQAR|RA 0.121 . ETH_00010605 496 LEAQARR|AA 0.175 . ETH_00010605 525 LQPQVSR|LL 0.076 . ETH_00010605 528 QVSRLLR|ER 0.189 . ETH_00010605 530 SRLLRER|TS 0.107 . ETH_00010605 536 RTSCVGR|WQ 0.162 . ETH_00010605 548 QHEGQLK|HD 0.067 . ETH_00010605 552 QLKHDQR|QQ 0.099 . ETH_00010605 558 RQQQCVK|AA 0.076 . ETH_00010605 568 VSCDAVR|YS 0.094 . ETH_00010605 572 AVRYSAK|AS 0.099 . ETH_00010605 582 AQSSTDR|SS 0.158 . ETH_00010605 588 RSSSSTK|RC 0.072 . ETH_00010605 589 SSSSTKR|CF 0.340 . ETH_00010605 594 KRCFSVK|GR 0.075 . ETH_00010605 596 CFSVKGR|LT 0.150 . ETH_00010605 611 SAAFSLR|HR 0.110 . ETH_00010605 613 AFSLRHR|PQ 0.091 . ETH_00010605 627 QQQQPLR|RR 0.086 . ETH_00010605 628 QQQPLRR|RS 0.110 . ETH_00010605 629 QQPLRRR|SL 0.186 . ETH_00010605 632 LRRRSLK|LV 0.232 . ETH_00010605 635 RSLKLVR|SR 0.091 . ETH_00010605 637 LKLVRSR|LL 0.083 . ETH_00010605 658 EENIPQK|EH 0.069 . ETH_00010605 675 SLPASHK|AE 0.066 . ETH_00010605 707 ADNSAAR|LP 0.080 . ETH_00010605 737 PNADFLR|SR 0.141 . ETH_00010605 739 ADFLRSR|ST 0.192 . ETH_00010605 753 ATTPAAR|ER 0.076 . ETH_00010605 755 TPAARER|IS 0.098 . ETH_00010605 760 ERISAAR|AF 0.115 . ETH_00010605 768 FLASEAK|IH 0.063 . ETH_00010605 771 SEAKIHR|RL 0.073 . ETH_00010605 772 EAKIHRR|LL 0.151 . ETH_00010605 778 RLLLACR|RM 0.078 . ETH_00010605 779 LLLACRR|MQ 0.112 . ETH_00010605 785 RMQQQQR|LP 0.097 . ETH_00010605 798 NTFFTGK|AT 0.067 . ETH_00010605 821 AFSQQTR|RL 0.148 . ETH_00010605 822 FSQQTRR|LG 0.138 . ETH_00010605 839 AAAAAAR|GI 0.111 . ETH_00010605 842 AAARGIK|AL 0.125 . ETH_00010605 854 AASPCGK|GD 0.079 . ETH_00010605 860 KGDINGR|TP 0.075 . ETH_00010605 870 AAAFAAK|QF 0.069 . ETH_00010605 875 AKQFLSR|QR 0.077 . ETH_00010605 877 QFLSRQR|TC 0.081 . ETH_00010605 888 AVSEGER|SK 0.128 . ETH_00010605 890 SEGERSK|LG 0.059 . ETH_00010605 894 RSKLGER|SS 0.129 . ETH_00010605 898 GERSSLK|QQ 0.067 . ETH_00010605 905 QQQHQHK|QQ 0.081 . ETH_00010605 917 QQQQASR|LL 0.086 . ETH_00010605 922 SRLLCSR|RT 0.076 . ETH_00010605 923 RLLCSRR|TI 0.173 . ETH_00010605 930 TIGSSAR|RA 0.100 . ETH_00010605 931 IGSSARR|AV 0.289 . ____________________________^_________________
  • Fasta :-

    >ETH_00010605 ATGGGGTCCGCGTTGAGTACCGGGAAGCATCCCCTAATAGATTCGTCCTTGGTATTTCCA GCCCCCCCATCTTCATACAGCTGCAGCAGCGATGGCTTGTTGCTGCTCCGTTCCCGGTTT GCTATCACCTCGGGATCTCCTGCGGCAGTGCCAGCGTTCCTTGTGGTTCCTTCTCCACAA TCTCACCTTAAGCTTGCTGCAGCCCTAAGGACAGCTCGACTAGCTGCTGCTGCTGCCGAA GCAGCAGTCGCTGCTGCTGCTGCAGCAGGCGGCCTCCCTCCCCAGCAGCAGCAACGCCGT CGGAGCAATATAGAAGGGATATGCGCATCTCCAGCCGCAGTGGCAAGGACGGAGCTGAGT GATGGAGAAACCGAGCGGCAGCAGCAGCTGTTCCAGCAACTGGAACAAAGGAGAAAGGAG CTGCAGCAGCACATGCTAGTGCTGCAGCAGTTGCAGCGAGAGCAAAGGCAGCAGCGGGTC CTGCGCCGCAGACAGACGCGCAGGGCCTTGACTTCACAAGCTGAAGAACCAGCAAGTACG ACAGCAGAAGCAGAAGGTGGAGAAGCAGAAGCAGCAGCATCGGTAGTCGCTGCTGCTGCT CTTACGATCAGTTCAGCAGCGGATACTCCTGCTTCTCAGAGGGAATCATTCCTTCTCTCA ACAAGTTCAGAAGCAGGGGAAGCGAGCGCAGCAGCAGCAAGTGACGCAGTATTGACAGCA GGAAAGAGTGGCAGCTACTGGGACACGGAAGCCACGGGAGGCGGTGTAGGCAGTGACTAT TGCATTCTTTACTTCCATGGAAACGCGTGCGATGCCAACATGGTCAGAGGGTGGCTGCAA GTTGTCGCAGACGAGTTGGGCATCCCTATTCTGGTCTTTGAATACCCGGGCTATGGCCTC CTCTCGGGTATTGCGTCTTCTTCTTCCGGGATCGACCGCTGTGCCAAGGTCGCTCTGGAG TTTCTCGTAGAGCAGCTGCAGTTTCCCCCGGAAAAGATCATCCTTTGTGGCCGGTCTATA GGGACAGGCCCTGCTGCTTTTCTCGCCTCTCGCTTAGCCAAGTGCAACTTGCAGCTGGGC GGCCTTGTGCTCATATCTCCTTTTGCATCCATGGCAGCCCTTGCAGCTGATATGGCGGAC TTGCCTGAATCGTTGGCACGTCTGGTGGTGACTCATCACTGGGACACAGAGGCGGCCCTG AAGCAATGTCAGGGGCTTCCCCTCTGCATCATTCACGGACAGGAAGACGAGATAATTCCA GTGTCACACTCTCGCCGTTTGCTTTCGAGTGCGCTTCACTCTGCTGCGCTGCGAGTGTCT CATCTTCCGCCTCATGCGAATCATTCAATTGGCTTAGAGCCTGCTGCAATGAGGGAGGAG GTACTTCAGCCGCTGCAGCTATTTCTCCGTAAGGTTCGGTGTGCTGCTCGCCTGAGAAGG CAGCAACAGCTTCACCACAAGAAACACCTTGAGGCCCAAGCAAGGAGAGCAGCAGCAGCG AATGCAGCAGCCACTGCGGTTGCAGCAGCTGCTGCTGACTCCCTTGTGGGTCACCTCCAA CCCCAAGTGTCCCGGCTGCTTCGTGAAAGGACCAGCTGCGTTGGCAGATGGCAATTTCAG CAGCAGCATGAGGGGCAGCTCAAGCACGATCAGCGACAGCAGCAATGTGTTAAGGCAGCA TCAGTAAGTTGCGATGCGGTGAGGTATTCTGCGAAAGCCTCTGGTGCGCAGAGCAGCACA GATAGGAGCAGCAGCAGCACTAAACGATGCTTTTCAGTTAAAGGTCGCCTGACGAGCCCG CTTACTATGCAGTCAGCTGCATTCTCACTGCGCCACCGGCCTCAACACTTGGAGCACATG CAACAGCAGCAGCCGTTGCGCCGCCGATCCTTGAAGCTTGTTCGCTCGAGATTGCTTGAG GTAGACAGCAGCAGCACGGACGATGATACTGTAGAGGAAAATATACCGCAGAAGGAGCAT GGGGACGAAGATATACCTGAATCGTCGTTGCCAGCATCTCACAAAGCAGAAGTGGCAGCA ACTTTAGAGGCAGTGGACTCGGACGCGTCAGAAACGGAAGCAGATGGTGCAGCTGTAGCT GCAGACAACTCAGCGGCTCGCTTACCACAGTCTTTCTATGGTGACTCTGATGCTGAGGCT TCTTCAGCTCCCGTTGCGACAGTAACAGCACCTAACGCAGATTTCTTACGGAGCCGCAGC ACAGATACAGGAACAGCAGCAACAACACCAGCAGCAAGAGAGAGGATCAGTGCAGCGCGG GCATTTCTGGCTTCAGAGGCTAAGATTCACCGGAGACTGCTGCTGGCGTGCAGACGCATG CAGCAGCAGCAGCGGCTGCCAATAGCCTCAGCCAACACATTTTTCACGGGCAAGGCAACA GCTCCAGCGGCAGCAGCAGGCGCTCCTGCTGTCGCTGCTGTGGCATTTTCACAACAGACA AGGCGTTTGGGGACTGTCGGTGAAGCTCCAGGTGCAGCAGCAGCAGCAGCAGCTCGGGGC ATAAAGGCCCTCCACATTCCAGCTGCCAGCCCATGTGGCAAGGGAGACATCAATGGCCGA ACACCAGCAGCAGCTGCCTTTGCTGCAAAGCAGTTTCTCTCAAGACAGAGGACGTGCCAT TCTGCCGTTTCGGAAGGAGAACGTTCAAAATTGGGAGAACGCTCCAGCTTAAAACAGCAG CAGCATCAACACAAACAACAGCAGGAGGAGCAGCAACAGCAGGCGAGTCGGCTGCTTTGC TCCCGACGAACAATTGGTTCATCAGCAAGAAGGGCTGTCTCACTCACAGGGGGCCACATG TTTTGTAGCCAAAACGCAGAGCAGCAATAG
  • Download Fasta
  • Fasta :-

    MGSALSTGKHPLIDSSLVFPAPPSSYSCSSDGLLLLRSRFAITSGSPAAVPAFLVVPSPQ SHLKLAAALRTARLAAAAAEAAVAAAAAAGGLPPQQQQRRRSNIEGICASPAAVARTELS DGETERQQQLFQQLEQRRKELQQHMLVLQQLQREQRQQRVLRRRQTRRALTSQAEEPAST TAEAEGGEAEAAASVVAAAALTISSAADTPASQRESFLLSTSSEAGEASAAAASDAVLTA GKSGSYWDTEATGGGVGSDYCILYFHGNACDANMVRGWLQVVADELGIPILVFEYPGYGL LSGIASSSSGIDRCAKVALEFLVEQLQFPPEKIILCGRSIGTGPAAFLASRLAKCNLQLG GLVLISPFASMAALAADMADLPESLARLVVTHHWDTEAALKQCQGLPLCIIHGQEDEIIP VSHSRRLLSSALHSAALRVSHLPPHANHSIGLEPAAMREEVLQPLQLFLRKVRCAARLRR QQQLHHKKHLEAQARRAAAANAAATAVAAAAADSLVGHLQPQVSRLLRERTSCVGRWQFQ QQHEGQLKHDQRQQQCVKAASVSCDAVRYSAKASGAQSSTDRSSSSTKRCFSVKGRLTSP LTMQSAAFSLRHRPQHLEHMQQQQPLRRRSLKLVRSRLLEVDSSSTDDDTVEENIPQKEH GDEDIPESSLPASHKAEVAATLEAVDSDASETEADGAAVAADNSAARLPQSFYGDSDAEA SSAPVATVTAPNADFLRSRSTDTGTAATTPAARERISAARAFLASEAKIHRRLLLACRRM QQQQRLPIASANTFFTGKATAPAAAAGAPAVAAVAFSQQTRRLGTVGEAPGAAAAAAARG IKALHIPAASPCGKGDINGRTPAAAAFAAKQFLSRQRTCHSAVSEGERSKLGERSSLKQQ QHQHKQQQEEQQQQASRLLCSRRTIGSSARRAVSLTGGHMFCSQNAEQQ

    No Results
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IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_00010605166 TRRRQTRRAL0.996unspETH_00010605166 TRRRQTRRAL0.996unspETH_00010605166 TRRRQTRRAL0.996unspETH_00010605212 SDTPASQRES0.997unspETH_00010605245 SGKSGSYWDT0.992unspETH_00010605309 SASSSSGIDR0.994unspETH_00010605570 SAVRYSAKAS0.993unspETH_00010605583 SSTDRSSSST0.991unspETH_00010605584 STDRSSSSTK0.992unspETH_00010605585 SDRSSSSTKR0.991unspETH_00010605586 SRSSSSTKRC0.996unspETH_00010605592 SKRCFSVKGR0.995unspETH_00010605630 SLRRRSLKLV0.996unspETH_00010605644 SEVDSSSTDD0.994unspETH_00010605645 SVDSSSTDDD0.995unspETH_00010605673 SSLPASHKAE0.995unspETH_00010605690 SDSDASETEA0.995unspETH_00010605102 SQRRRSNIEG0.998unspETH_00010605120 SRTELSDGET0.994unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India