ETH_00010630 | hypothetical protein, conserved

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_IDPredictionOTHERSPmTPCS_Position
ETH_00010630OTHER0.9999240.0000750.000001
No Results

  • Fasta :-

    >ETH_00010630 MGNAAASSVAASTASSSGSCSSCSCSSNSKSSCSSCSSCSSSSKPRLAPPLNWQVLWEDP LCCCCELKPSPPFAALYPLDGCPEHGQFINSLGLALHYYIWYPPCSSSSSSSSSKCYCVR RKRSSWAERACSVSGPSPSLPYCKFAAQLQQEQQQQTQGDQQQQQQQQQGDQEQQQQQEQ RHPDEEAHGQQQQADEEQQQQQQQQQQEEGEEEVEWLCVGCRQQRLQQSRGVVLLLHGYQ SHARFSWLRRWAPRPSCCRDPRVCGYVPHSLLAQQQQQQQQQQRSSSSGGGGGAAAAPPR RCAAAAAAAAAERGEGAGVAPRSSSSSSAAAAAAAAAAAAAACGGCRGSPQYGGSFVEVL NKMGFVVFGLDLEGHGLSESWKERKGCCCCLRDLALDAMQAAAALRRRLAALAAADAAAA AAAAAAAGAAAAQQDLAAAQKDPAAAAPAAAPAAAAAAADAAAETEETQEARGANEADET NETKELKAAKESKAAAAAAKDIVGSPLPLPVFLVGSSLGGWTAARFMQLAADEAAIKEAL PHFAAAVTARAAAAAAAGAAAAEKGAAAAEKGAAAAEQGAAAAEQGAAGAAAAAGAAGSL GELMREWFCVSGLILLSPMLDVELSKKSARWTYTRWLLQQLSRFAPQLPVRSSSSSSSSK FEAEQQQRAADPLPRCLYTPRRQPKSPRKLVGPFC
  • Download Fasta
  • MitoProt II - v1.101 File : /home/rajan/sadaf/4480_mitoprot/test/ETH_00010630.fa Sequence name : ETH_00010630 Sequence length : 695 VALUES OF COMPUTED PARAMETERS Coef20 : 4.593 CoefTot : 2.022 ChDiff : 0 ZoneTo : 57 KR : 3 DE : 0 CleavSite : 48 HYDROPHOBIC SCALE USED GES KD GVH1 ECS H17 : 1.706 1.724 0.435 0.652 MesoH : 0.198 0.795 -0.076 0.362 MuHd_075 : 15.768 14.908 5.451 3.733 MuHd_095 : 13.785 16.690 6.087 3.267 MuHd_100 : 13.370 13.708 6.898 2.850 MuHd_105 : 16.832 12.090 8.084 3.016 Hmax_075 : 10.033 12.833 4.524 3.880 Hmax_095 : 8.575 9.275 3.185 0.683 Hmax_100 : 8.400 9.400 6.867 2.540 Hmax_105 : 9.100 5.950 5.904 0.385 CLASS NOT-MITO MITO(/CHLORO) DFM : 0.1545 0.8455 DFMC : 0.0452 0.9548 This protein is probably imported in chloroplast. f(Ser) = 0.4035 f(Arg) = 0.0175 CMi = 4.26716 CMi is the Chloroplast/Mitochondria Index It has been proposed by Von Heijne et al (Eur J Biochem,1989, 180: 535-545)
  • ##### ProP v.1.0b ProPeptide Cleavage Site Prediction ##### ##### Furin-type cleavage site prediction (Arginine/Lysine residues) ##### 695 ETH_00010630 MGNAAASSVAASTASSSGSCSSCSCSSNSKSSCSSCSSCSSSSKPRLAPPLNWQVLWEDPLCCCCELKPSPPFAALYPLD 80 GCPEHGQFINSLGLALHYYIWYPPCSSSSSSSSSKCYCVRRKRSSWAERACSVSGPSPSLPYCKFAAQLQQEQQQQTQGD 160 QQQQQQQQQGDQEQQQQQEQRHPDEEAHGQQQQADEEQQQQQQQQQQEEGEEEVEWLCVGCRQQRLQQSRGVVLLLHGYQ 240 SHARFSWLRRWAPRPSCCRDPRVCGYVPHSLLAQQQQQQQQQQRSSSSGGGGGAAAAPPRRCAAAAAAAAAERGEGAGVA 320 PRSSSSSSAAAAAAAAAAAAAACGGCRGSPQYGGSFVEVLNKMGFVVFGLDLEGHGLSESWKERKGCCCCLRDLALDAMQ 400 AAAALRRRLAALAAADAAAAAAAAAAAGAAAAQQDLAAAQKDPAAAAPAAAPAAAAAAADAAAETEETQEARGANEADET 480 NETKELKAAKESKAAAAAAKDIVGSPLPLPVFLVGSSLGGWTAARFMQLAADEAAIKEALPHFAAAVTARAAAAAAAGAA 560 AAEKGAAAAEKGAAAAEQGAAAAEQGAAGAAAAAGAAGSLGELMREWFCVSGLILLSPMLDVELSKKSARWTYTRWLLQQ 640 LSRFAPQLPVRSSSSSSSSKFEAEQQQRAADPLPRCLYTPRRQPKSPRKLVGPFC 720 ................................................................................ 80 ..........................................P..................................... 160 ................................................................................ 240 ................................................................................ 320 ................................................................................ 400 ................................................................................ 480 ................................................................................ 560 ................................................................................ 640 ....................................................... 720 Propeptide cleavage sites predicted: Arg(R)/Lys(K): 1 Name Pos Context Score Pred ____________________________v_________________ ETH_00010630 30 SCSSNSK|SS 0.083 . ETH_00010630 44 SCSSSSK|PR 0.061 . ETH_00010630 46 SSSSKPR|LA 0.151 . ETH_00010630 68 CCCCELK|PS 0.056 . ETH_00010630 115 SSSSSSK|CY 0.077 . ETH_00010630 120 SKCYCVR|RK 0.082 . ETH_00010630 121 KCYCVRR|KR 0.112 . ETH_00010630 122 CYCVRRK|RS 0.098 . ETH_00010630 123 YCVRRKR|SS 0.759 *ProP* ETH_00010630 129 RSSWAER|AC 0.183 . ETH_00010630 144 PSLPYCK|FA 0.078 . ETH_00010630 181 QQQQEQR|HP 0.120 . ETH_00010630 222 WLCVGCR|QQ 0.078 . ETH_00010630 225 VGCRQQR|LQ 0.132 . ETH_00010630 230 QRLQQSR|GV 0.145 . ETH_00010630 244 GYQSHAR|FS 0.098 . ETH_00010630 249 ARFSWLR|RW 0.084 . ETH_00010630 250 RFSWLRR|WA 0.138 . ETH_00010630 254 LRRWAPR|PS 0.112 . ETH_00010630 259 PRPSCCR|DP 0.091 . ETH_00010630 262 SCCRDPR|VC 0.339 . ETH_00010630 284 QQQQQQR|SS 0.228 . ETH_00010630 300 AAAAPPR|RC 0.091 . ETH_00010630 301 AAAPPRR|CA 0.201 . ETH_00010630 313 AAAAAER|GE 0.116 . ETH_00010630 322 GAGVAPR|SS 0.153 . ETH_00010630 347 AACGGCR|GS 0.099 . ETH_00010630 362 FVEVLNK|MG 0.060 . ETH_00010630 382 GLSESWK|ER 0.067 . ETH_00010630 384 SESWKER|KG 0.092 . ETH_00010630 385 ESWKERK|GC 0.100 . ETH_00010630 392 GCCCCLR|DL 0.093 . ETH_00010630 406 QAAAALR|RR 0.082 . ETH_00010630 407 AAAALRR|RL 0.113 . ETH_00010630 408 AAALRRR|LA 0.125 . ETH_00010630 441 DLAAAQK|DP 0.071 . ETH_00010630 472 EETQEAR|GA 0.127 . ETH_00010630 484 DETNETK|EL 0.064 . ETH_00010630 487 NETKELK|AA 0.069 . ETH_00010630 490 KELKAAK|ES 0.067 . ETH_00010630 493 KAAKESK|AA 0.091 . ETH_00010630 500 AAAAAAK|DI 0.085 . ETH_00010630 525 GGWTAAR|FM 0.088 . ETH_00010630 537 ADEAAIK|EA 0.062 . ETH_00010630 550 AAAVTAR|AA 0.177 . ETH_00010630 564 GAAAAEK|GA 0.093 . ETH_00010630 571 GAAAAEK|GA 0.108 . ETH_00010630 605 SLGELMR|EW 0.096 . ETH_00010630 626 LDVELSK|KS 0.057 . ETH_00010630 627 DVELSKK|SA 0.132 . ETH_00010630 630 LSKKSAR|WT 0.114 . ETH_00010630 635 ARWTYTR|WL 0.114 . ETH_00010630 643 LLQQLSR|FA 0.107 . ETH_00010630 651 APQLPVR|SS 0.144 . ETH_00010630 660 SSSSSSK|FE 0.082 . ETH_00010630 668 EAEQQQR|AA 0.114 . ETH_00010630 675 AADPLPR|CL 0.092 . ETH_00010630 681 RCLYTPR|RQ 0.074 . ETH_00010630 682 CLYTPRR|QP 0.100 . ETH_00010630 685 TPRRQPK|SP 0.353 . ETH_00010630 688 RQPKSPR|KL 0.091 . ETH_00010630 689 QPKSPRK|LV 0.124 . ____________________________^_________________

  • Fasta :-

    >ETH_00010630 ATGGGAAACGCCGCGGCCTCTTCCGTGGCCGCCTCCACCGCGAGCAGCAGCGGCAGCTGC AGCAGCTGCAGCTGCAGCAGCAACAGCAAGTCCAGCTGCAGCAGCTGCAGCAGCTGCAGC AGCAGCAGCAAGCCAAGGCTGGCCCCCCCACTCAACTGGCAGGTCTTGTGGGAAGACCCT CTTTGCTGCTGCTGCGAGCTGAAGCCCTCGCCGCCTTTTGCTGCTCTTTATCCTTTAGAT GGCTGCCCCGAACATGGCCAGTTCATTAACTCTTTGGGCCTCGCGCTGCACTACTACATC TGGTACCCCCCCTGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAAGTGTTACTGCGTGAGG CGGAAGCGCAGCAGCTGGGCCGAAAGGGCCTGTTCCGTCTCGGGCCCTTCTCCCAGCTTG CCCTACTGCAAATTCGCAGCCCAGCTGCAGCAGGAGCAGCAGCAGCAAACGCAAGGAGAC CAGCAGCAGCAGCAGCAGCAGCAGCAAGGGGACCAAGAGCAGCAGCAGCAGCAGGAGCAG CGCCACCCCGACGAAGAGGCCCACGGGCAGCAGCAGCAAGCGGACGAAGAGCAGCAACAG CAGCAGCAGCAGCAGCAGCAGGAGGAAGGGGAGGAGGAGGTGGAGTGGCTGTGTGTGGGG TGCCGGCAGCAGCGGCTGCAGCAAAGTCGAGGAGTTGTGCTGCTGCTGCACGGCTACCAG TCCCACGCCCGTTTCTCGTGGCTGCGGCGGTGGGCCCCGAGGCCCTCTTGCTGCAGAGAC CCTCGGGTTTGTGGCTACGTGCCCCACTCGCTGCTCGCGCAGCAGCAGCAGCAGCAGCAG CAGCAGCAGCGCAGCAGCAGCAGCGGGGGCGGGGGCGGCGCGGCGGCTGCGCCGCCGCGC CGCTGCGCAGCAGCAGCAGCAGCGGCGGCCGCGGAGCGCGGAGAGGGAGCGGGCGTCGCG CCCCGCAGCAGCAGCAGCAGCAGCGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCA GCAGCGTGCGGCGGCTGCAGAGGCAGCCCGCAGTACGGCGGCAGCTTCGTGGAAGTTCTG AACAAAATGGGATTTGTTGTTTTCGGATTGGACTTGGAAGGCCACGGACTTTCGGAAAGT TGGAAAGAAAGAAAAGGCTGCTGCTGCTGCTTGCGGGACTTGGCGCTGGACGCAATGCAA GCAGCAGCAGCGCTCAGGAGGCGCCTTGCTGCGCTCGCTGCAGCAGACGCAGCAGCAGCA GCAGCAGCGGCGGCGGCGGCCGGCGCAGCAGCGGCGCAGCAAGACCTGGCCGCCGCCCAG AAAGACCCCGCCGCTGCCGCTCCTGCTGCTGCACCTGCTGCTGCTGCTGCTGCTGCAGAT GCAGCAGCGGAGACAGAGGAGACCCAGGAGGCAAGAGGAGCAAATGAAGCAGATGAAACA AATGAAACAAAAGAGTTAAAAGCAGCAAAAGAATCAAAAGCAGCAGCAGCAGCAGCAAAA GATATTGTGGGGTCTCCTTTGCCGCTGCCTGTCTTTCTTGTGGGGTCTTCTTTGGGGGGC TGGACTGCAGCAAGATTTATGCAGCTTGCTGCTGACGAAGCAGCAATTAAGGAGGCGCTG CCGCACTTTGCTGCTGCAGTCACCGCAAGGGCTGCAGCAGCAGCAGCAGCAGGTGCTGCA GCAGCAGAAAAAGGAGCTGCAGCAGCAGAAAAAGGAGCTGCAGCAGCAGAGCAAGGAGCT GCAGCAGCAGAGCAAGGCGCAGCAGGAGCAGCAGCAGCAGCAGGAGCAGCAGGAAGTTTG GGAGAGTTGATGCGGGAGTGGTTTTGTGTCTCCGGATTAATTCTTTTGTCTCCAATGCTG GACGTGGAGTTGTCGAAGAAGAGCGCGAGGTGGACGTACACCCGGTGGCTGCTGCAGCAG CTGTCGCGGTTCGCGCCGCAGCTGCCGGTGCGGAGCAGCAGCAGCAGCAGCAGCAGCAAG TTCGAGGCGGAGCAGCAGCAGCGCGCCGCAGACCCGCTGCCGAGGTGTCTGTACACCCCG CGGAGACAGCCAAAATCTCCCCGCAAACTTGTGGGGCCCTTCTGCTAG
  • Download Fasta

  • Fasta :-

    MGNAAASSVAASTASSSGSCSSCSCSSNSKSSCSSCSSCSSSSKPRLAPPLNWQVLWEDP LCCCCELKPSPPFAALYPLDGCPEHGQFINSLGLALHYYIWYPPCSSSSSSSSSKCYCVR RKRSSWAERACSVSGPSPSLPYCKFAAQLQQEQQQQTQGDQQQQQQQQQGDQEQQQQQEQ RHPDEEAHGQQQQADEEQQQQQQQQQQEEGEEEVEWLCVGCRQQRLQQSRGVVLLLHGYQ SHARFSWLRRWAPRPSCCRDPRVCGYVPHSLLAQQQQQQQQQQRSSSSGGGGGAAAAPPR RCAAAAAAAAAERGEGAGVAPRSSSSSSAAAAAAAAAAAAAACGGCRGSPQYGGSFVEVL NKMGFVVFGLDLEGHGLSESWKERKGCCCCLRDLALDAMQAAAALRRRLAALAAADAAAA AAAAAAAGAAAAQQDLAAAQKDPAAAAPAAAPAAAAAAADAAAETEETQEARGANEADET NETKELKAAKESKAAAAAAKDIVGSPLPLPVFLVGSSLGGWTAARFMQLAADEAAIKEAL PHFAAAVTARAAAAAAAGAAAAEKGAAAAEKGAAAAEQGAAAAEQGAAGAAAAAGAAGSL GELMREWFCVSGLILLSPMLDVELSKKSARWTYTRWLLQQLSRFAPQLPVRSSSSSSSSK FEAEQQQRAADPLPRCLYTPRRQPKSPRKLVGPFC

    No Results
No Results
No Results
IDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethodIDSitePeptideScoreMethod
ETH_00010630654 SVRSSSSSSS0.993unspETH_00010630654 SVRSSSSSSS0.993unspETH_00010630654 SVRSSSSSSS0.993unspETH_00010630658 SSSSSSSKFE0.995unspETH_00010630659 SSSSSSKFEA0.997unspETH_00010630686 SRQPKSPRKL0.997unspETH_00010630113 SSSSSSSKCY0.995unspETH_00010630125 SRKRSSWAER0.998unsp

     



Dinesh Gupta lab Translational bioinformatics group, ICGEB, New Delhi, India